Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d15f
(607 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 36 0.034
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19) 34 0.078
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.14
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.14
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 32 0.31
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26) 31 0.55
SB_15403| Best HMM Match : CH (HMM E-Value=0) 31 0.55
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 31 0.72
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 0.72
SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16) 31 0.72
SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 5.1
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 28 5.1
SB_56178| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_35840| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=0.38) 28 6.7
SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18) 28 6.7
SB_59483| Best HMM Match : DUF402 (HMM E-Value=3.8) 28 6.7
SB_53006| Best HMM Match : PH (HMM E-Value=1.8e-10) 28 6.7
SB_20684| Best HMM Match : zf-C2H2 (HMM E-Value=5.8) 28 6.7
SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15) 27 8.9
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 8.9
SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0) 27 8.9
SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20) 27 8.9
SB_16801| Best HMM Match : MSSP (HMM E-Value=0.31) 27 8.9
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 157 ACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDGIRLS 336
+C DCT PICA +++ NEC+M CE+ L S CP D + L+
Sbjct: 2153 SCPDDCTNET-KPICASDG----QTYDNECLMQKRACENNQNLNVTSDRACPCKDPVDLA 2207
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = +1
Query: 97 SCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHK 276
SCRP LD K V A C +C+ + +DP+C G ++ NEC+M C
Sbjct: 1194 SCRP--LDNKPVCA-------CPENCS-STVDPVC----GSDNNTYDNECLMRQQACVAN 1239
Query: 277 DTLRKISQGQC 309
T+ +G C
Sbjct: 1240 TTVAVRRKGDC 1250
Score = 31.5 bits (68), Expect = 0.55
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = +1
Query: 97 SCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHK 276
SCRP LD K V A C +C+ + +DP+C G ++ NEC+M C
Sbjct: 1123 SCRP--LDNKPVCA-------CPENCS-STVDPVC----GTDNNTYDNECLMRQQACVAN 1168
Query: 277 DTLRKISQGQC 309
T+ +G C
Sbjct: 1169 ATVAVRRKGHC 1179
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = +1
Query: 139 DAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
D + C DC K L P+C G + NEC+M C T+ G C
Sbjct: 1366 DGKATCECSEDCPKT-LKPVC----GSDNNDYDNECLMQARACATNKTITAHRNGYC 1417
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 214 GEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
G K++ NECV+ CE TL ++G C +G
Sbjct: 1662 GSDGKTYDNECVLRMAACESNRTLAVRNEGNCGLCEG 1698
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 139 DAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
D E C DC K + + +C G K++ NEC+M C + + S G+C
Sbjct: 1783 DNEAVCECPKDCPKEDAE-VC----GTNWKTYTNECMMRKQACMNNSMVTVRSIGRC 1834
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +1
Query: 187 LDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
LDP+CA P NEC M C+ L +G C
Sbjct: 1588 LDPVCASDNNTYP----NECAMKQLACQSAKVLTFRRKGDC 1624
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 157 ACMHDCTKANL-DPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 312
+C C +L PIC G K++ NEC + +C++ ++ + +CP
Sbjct: 288 SCPSSCGDESLPQPIC----GSNNKTYANECELRMDSCKNNKSIAIQFRKECP 336
>SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19)
Length = 69
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C+ C N DP+C G K++GNEC++ C T+ G+C
Sbjct: 24 CVRPCPAIN-DPVC----GTDGKTYGNECMLGAATCHSNGTITLAYPGEC 68
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 34.7 bits (76), Expect = 0.059
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 181 ANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 312
A+ P+CA K++ N M N CE LR +SQG+CP
Sbjct: 1529 ADYTPVCASDG----KTYPNRMSMENAGCEKNMILRIVSQGECP 1568
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 163 MHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 312
M C+ AN +C G ++ NEC + C+ L +SQG CP
Sbjct: 1442 MFKCS-ANRSDVC----GSDRMTYSNECTLTQTACQESKNLTVVSQGPCP 1486
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 193 PICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
P+CA K + N M N CE LR +SQ QC
Sbjct: 1979 PVCASDG----KIYPNRMTMENAGCEKNMVLRAVSQDQC 2013
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +1
Query: 127 QVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQ 306
QV+ D C CT + P+C G K++GN+C M C + G+
Sbjct: 1284 QVEDDGSTSCKCPIFCTYEYM-PVC----GTDGKTYGNKCEMRASACLKSTMVTVAYPGE 1338
Query: 307 CPGSD 321
C +D
Sbjct: 1339 CESND 1343
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 190 DPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
DP+CA K++ N C M+ C L +SQG C
Sbjct: 1605 DPVCASNG----KTYSNRCDMDADACIRDTKLTVVSQGAC 1640
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +1
Query: 163 MHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 312
+++C K N +C G ++ NEC + Y C ++ G+CP
Sbjct: 1891 VNECPK-NSSKVC----GSDGWTYDNECFLKLYTCRQGKDVKVQQMGECP 1935
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 172 CTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
CT A+ P+CA +++ N C M++ C+ L+ + G C
Sbjct: 1817 CT-ADYSPVCASDG----QTYPNVCTMDSAGCQKSMNLKVVRNGTC 1857
>SB_135| Best HMM Match : Kazal_1 (HMM E-Value=2.9e-19)
Length = 92
Score = 34.3 bits (75), Expect = 0.078
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C CTK P+C G K++GN+CV+ CE + ++ +G+C
Sbjct: 39 CNRACTKI-YRPVC----GTDGKTYGNKCVLEIATCESEGAVQLAHEGEC 83
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 151 KKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
K +C C + P+C G KS+G+EC + CE K L +S+G+C
Sbjct: 1679 KCSCPIYCPPSG-QPVC----GSDGKSYGSECELRKEACEAKIKLTLVSKGKC 1726
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 190 DPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPG 315
DP+C G K + NEC++N C LR +++G C G
Sbjct: 822 DPVC----GTDNKEYANECLLNVAACAANIHLRVLNKGPCGG 859
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 181 ANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
+ L P+CA +++ NECVM C K+++ K G C
Sbjct: 892 SELRPVCASDG----RTYVNECVMRALACSRKESVNKTKDGAC 930
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C CT A D +C G +++ N+C++ + +C+ + T+ + +G C
Sbjct: 1891 CDEKCTFA-FDAVC----GSNGRTYINDCLLRSDSCKLRKTIVVLQKGAC 1935
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 190 DPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
DP+CA +++ NEC+ Y CE K L + G+C
Sbjct: 624 DPVCASDG----RTYQNECLAKKYACEKKRDL-TFTLGKC 658
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 169 DCTKANLDPICAGKT--GEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
+C +D +G T K++ +EC + NC LR I +G+C
Sbjct: 1067 ECVCPTVDQCPSGSTVCASDGKTYASECHVKVRNCGRYPKLRVIFEGEC 1115
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +1
Query: 139 DAERKKACM--HDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
D K C +C N P+C G +++ +EC+M C K +R G+C
Sbjct: 354 DGSMKCVCPKPEECPYVNA-PVC----GTDDRTYPSECIMKTSACADKKAVRVKHAGEC 407
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
CM CTK L+P+C G K++ N CV C+ LR +G C
Sbjct: 118 CMRRCTK-ELNPVC----GSDGKTYDNPCVFKIAVCQMNGQLRLKHRGAC 162
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +1
Query: 79 VLFVAVSCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNN 258
V +AV +L LK A R C C K P+C G ++ N C++ +
Sbjct: 142 VFKIAVCQMNGQLRLKHRGACGSRPDKCAPICNKM-YQPVC----GSDNVTYSNPCMLRS 196
Query: 259 YNCEHKDTLRKISQGQCPGS 318
C+ T+ +G+C S
Sbjct: 197 ATCKSNGTITMKHRGKCGSS 216
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C+ C + P+C G K++GN+C++ C T+ G+C
Sbjct: 44 CVRPCPAIYM-PVC----GTDGKTYGNKCMLGAATCRSNGTITLAYPGEC 88
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C +C + P+C G K++ NEC + CE K + SQG+C
Sbjct: 3970 CNKNCPSTS-KPVC----GSDGKTYKNECELKRAACESKKNVTVASQGEC 4014
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = +1
Query: 97 SCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHK 276
SCRP LD K V A C +C+ + +DP+C G ++ NEC+M C
Sbjct: 263 SCRP--LDNKPVCA-------CPENCS-STVDPVC----GSDNNTYDNECLMRQQACVAN 308
Query: 277 DTLRKISQGQC 309
T+ +G C
Sbjct: 309 TTVAVRRKGDC 319
Score = 31.5 bits (68), Expect = 0.55
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = +1
Query: 97 SCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHK 276
SCRP LD K V A C +C+ + +DP+C G ++ NEC+M C
Sbjct: 149 SCRP--LDNKPVCA-------CPENCS-STVDPVC----GTDNNTYDNECLMRQQACVAN 194
Query: 277 DTLRKISQGQC 309
T+ +G C
Sbjct: 195 ATVAVRRKGHC 205
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 10/54 (18%)
Frame = +1
Query: 181 ANLDPICAGKTGE---KPKSF----GNECVMNNYNCEHKDTLR---KISQGQCP 312
AN +P+C TGE P + GNEC+ NCE +L ++S GQCP
Sbjct: 2012 ANFNPVCNKTTGECYCNPYHYRSPKGNECL--KCNCEEIGSLSLQCRVSDGQCP 2063
>SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26)
Length = 143
Score = 31.5 bits (68), Expect = 0.55
Identities = 23/71 (32%), Positives = 33/71 (46%)
Frame = +1
Query: 97 SCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHK 276
SCRP LD K V A C +C+ + +DP+C G ++ NEC+M C
Sbjct: 15 SCRP--LDNKPVCA-------CPENCS-STVDPVC----GTDNNTYDNECLMRQQACVAN 60
Query: 277 DTLRKISQGQC 309
T+ +G C
Sbjct: 61 ATVAVRRKGHC 71
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDGIRL 333
C C N P+C G+ +++ NEC++ +C + ++ ++ G C + L
Sbjct: 973 CPRSCPSVNY-PVC----GDDGQTYDNECLLQLESCSRRRSITTVNYGSCGQQQPVHL 1025
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Frame = +1
Query: 169 DCTKANLDPIC----------AGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
+CT N P+C A G +S+ NEC++ +C+ + + +QG C
Sbjct: 5212 ECTAINGSPVCTCNSICTLEYAPVCGTDGQSYDNECLLQTASCQRNELIEVATQGTC 5268
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 187 LDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPG 315
LDP+C G K++ NEC + C+ + + + CPG
Sbjct: 5797 LDPVC----GSDGKNYDNECNLRQNACKTNTLITVVRRDACPG 5835
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 142 AERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
A K+ + C+ + P+C G GE ++ NEC + +C+ + + SQG C
Sbjct: 5545 AGEKRLHRNTCS-LDYTPVC-GTDGE---TYENECTLQISSCQRNEQVEVASQGHC 5595
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 193 PICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 312
P+C G G++ + NEC + +C + + S+G CP
Sbjct: 5305 PVC-GTDGQE---YSNECNLQIASCRKNELIEVASRGSCP 5340
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +1
Query: 160 CM-HDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
CM C N P+C G K++ NEC + Y C+ + S C
Sbjct: 5619 CMCQSCPSIN-KPVC----GSDGKTYNNECELRQYACKSDSLITVASLSSC 5664
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 31.1 bits (67), Expect = 0.72
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +1
Query: 130 VKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
V D C C K L P+C G K++ NEC+M +C+ + S C
Sbjct: 1058 VSVDGTPTCVCPRRCPK-KLMPVC----GSDGKTYNNECLMRAASCKANKNITVSSYFPC 1112
Query: 310 P 312
P
Sbjct: 1113 P 1113
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 145 ERKKACM-HDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 312
ER+ C C N+ P+C G + +EC + C+ + IS+G CP
Sbjct: 278 EREAICTCRSCPLINI-PVC----GSDGAQYDSECALQQQACQTDTDITVISEGPCP 329
>SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16)
Length = 98
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C C K P+C G K++GN+C++ CE + ++ +G+C
Sbjct: 39 CNRACKKI-YSPMC----GTDGKTYGNKCMLEIATCESEGAVKLAHEGEC 83
>SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 118 DLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYN 264
D ++AD +R+ C +D +N C G KP + C YN
Sbjct: 144 DFNIIRADRQRRSLCDNDFYDSNFYICCDGYISWKPSNDAQCCRHRAYN 192
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C H CT + P+C+ G + ++ CV++N +C + GQC
Sbjct: 2134 CTHTCTVLDGKPVCSCPQGYRLEN-PYRCVLSNASCASSEF--ACESGQC 2180
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 187 LDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 312
LDP+C G K++ N C + C+ + IS+ CP
Sbjct: 281 LDPVC----GSDGKNYDNVCKLRQNACKTNTLITLISRDACP 318
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +1
Query: 139 DAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPG 315
D + C+ C K L P+ G K++ NEC++ C+ K + G+ PG
Sbjct: 361 DGKPTCVCVEPCPKI-LKPVY----GSDGKNYDNECLLKLAACKSKSRILIAGSGRYPG 414
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 136 ADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPG 315
A R C C K P+C G ++ N C++ + C+ T+ +G+C
Sbjct: 18 AKGSRPDKCAPICNKM-YQPVC----GSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGS 72
Query: 316 S 318
S
Sbjct: 73 S 73
>SB_56178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 133 SPASGPACRDGTTPPRTTQRKHRK*WS 53
S S P D TPPR +RKHR WS
Sbjct: 331 SEESLPVVDDTNTPPRKRKRKHRM-WS 356
>SB_35840| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=0.38)
Length = 449
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 291 LAQRIFVFAIVVVHDTLVSE*LGFLSCLSSADRVKISFGA 172
LA IFV + VH TL +E + L C A R + A
Sbjct: 3 LAFAIFVLLLGAVHSTLATELIFMLMCFRCASRHAYEYSA 42
>SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18)
Length = 521
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 425 CQYYEYNLSKAMLLVPTINNVINYCFFSV 339
C Y Y +S+ L P N I YC SV
Sbjct: 352 CPYCGYEVSQTKLDCPECKNTIPYCIISV 380
>SB_59483| Best HMM Match : DUF402 (HMM E-Value=3.8)
Length = 796
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +3
Query: 195 YLRWKDRRETQVIRKRVCHEQLQLRTQRYVAQDQPRPVSWIRWH 326
Y+R + + + + +R+ +L L R+ PR +W +WH
Sbjct: 263 YIRPQLKPKCEYVRETGVSNKLALTRSRHKGARMPRKTTWRQWH 306
>SB_53006| Best HMM Match : PH (HMM E-Value=1.8e-10)
Length = 181
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = -2
Query: 399 ESNAVSTYYKQRD*LLFLQCSRETD---AI*SRTLALADLAQRIFVFAIVVVHDTLVSE* 229
E YY+ ++ + QC+ + +R L + + ++ FA+ + D L+++
Sbjct: 35 EGQVTWAYYRNKEDISSNQCAGHVELDSTYIARNLEVGEKKKKPHCFALGPLFDNLMAKR 94
Query: 228 LGFLSCLSSADRV 190
++SC S AD++
Sbjct: 95 TYYISCESEADKL 107
>SB_20684| Best HMM Match : zf-C2H2 (HMM E-Value=5.8)
Length = 395
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +3
Query: 195 YLRWKDRRETQVIRKRVCHEQLQLRTQRYVAQDQPRPVSWIRWH 326
Y+R + + + + +R+ +L L R+ PR +W +WH
Sbjct: 263 YIRPQLKPKCEYVRETGVSNKLALTRSRHKGARMPRKTTWRQWH 306
>SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 933
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFG------NECVMNNYNCEHKDTLRKISQG-QCPGS 318
C H C + C + G K K+ G NEC++ N CEH T + G C +
Sbjct: 546 CEHICENTHGSFNCDCRQGYKLKAGGYGCENINECLVKNGGCEH--TCKDYEGGYYCTCN 603
Query: 319 DGIRL 333
G RL
Sbjct: 604 PGYRL 608
>SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15)
Length = 426
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +1
Query: 103 RPDKLDLKQVKADAE-RKKACMHDCT---KANLDPICAGKTGEKPKSFGNE 243
R ++ L +++ + E R++ +H C KAN+D C G ++ + GN+
Sbjct: 241 RKSQVSLVEIRQNGETRRRLDLHRCRLVDKANVDNACDGNLNDEDVNGGND 291
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGS 318
C CT+ P+C G K++ N C + +C+ + I +G C S
Sbjct: 42 CNEACTR-EYAPVC----GSDGKTYPNPCALEVESCKTNTRISVIKKGSCDDS 89
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCP 312
C CT+ P C G ++ N CV+ +CE + L+ G CP
Sbjct: 279 CPKACTR-EYKPAC----GTDGNTYPNRCVLAIQSCETGEKLQLAHDGPCP 324
>SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 651
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Frame = +1
Query: 139 DAERKKACMHDCTKANLDPICAGKTGEKPKSFG------NECVMNNYNCEH 273
+ ++ C + CT N C+ + G ++ NECV +N NC H
Sbjct: 66 ECKKGAKCQYSCTNTNGSFYCSCRHGYALQADNTTCADINECVTSNGNCSH 116
>SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20)
Length = 87
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 181 ANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
+ +DP+C G ++ NEC+M C T+ +G C
Sbjct: 5 STVDPVC----GSDNNTYDNECLMRQQACVANTTVAVRRKGDC 43
>SB_16801| Best HMM Match : MSSP (HMM E-Value=0.31)
Length = 571
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 549 CLNDVKKT*NIFDFFINTITTKSDIVN*CCNKKIPIESK 433
C N + NI D N I +I++ CCNK P +K
Sbjct: 111 CCNIIDPCCNIIDPCCNIIDPCCNIIDPCCNKLHPCYNK 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,905,629
Number of Sequences: 59808
Number of extensions: 368401
Number of successful extensions: 1096
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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