Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d15f
(607 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457390-1|CAG33671.1| 346|Homo sapiens omains 2; complete cds,... 38 0.027
BC008973-1|AAH08973.1| 374|Homo sapiens transmembrane protein w... 38 0.027
AY358907-1|AAQ89266.1| 374|Homo sapiens TenB2 protein. 38 0.027
AK074507-1|BAC11030.1| 374|Homo sapiens protein ( Homo sapiens ... 38 0.027
AF242222-1|AAG49452.1| 374|Homo sapiens TPEF protein. 38 0.027
AF179274-1|AAD55776.2| 374|Homo sapiens transmembrane protein T... 38 0.027
AC098617-1|AAX88893.1| 195|Homo sapiens unknown protein. 38 0.027
AB017269-1|BAA87897.1| 374|Homo sapiens TMEFF2 protein. 38 0.027
AB004064-1|BAA90820.1| 368|Homo sapiens tomoregulin protein. 38 0.027
AK222691-1|BAD96411.1| 374|Homo sapiens transmembrane protein w... 37 0.048
X83961-1|CAA58791.1| 380|Homo sapiens transmembrane protein pro... 36 0.11
U19878-1|AAA64622.1| 380|Homo sapiens transmembrane protein pro... 36 0.11
BC035056-1|AAH35056.1| 380|Homo sapiens transmembrane protein w... 36 0.11
AL354917-2|CAI16192.1| 380|Homo sapiens transmembrane protein w... 36 0.11
AL353805-7|CAI12543.1| 380|Homo sapiens transmembrane protein w... 36 0.11
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 34 0.45
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 34 0.45
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 34 0.45
AF525689-1|AAN77133.1| 988|Homo sapiens signal peptide-CUB-EGF-... 32 1.4
DQ133599-1|AAZ43216.1| 175|Homo sapiens transmembrane protein w... 31 3.1
AC092644-1|AAY14874.1| 178|Homo sapiens unknown protein. 31 3.1
CR541813-1|CAG46612.1| 317|Homo sapiens FST protein. 30 7.3
X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila F... 29 9.6
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 29 9.6
U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2 pr... 29 9.6
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 29 9.6
AF093748-1|AAD29862.1| 140|Homo sapiens KH type splicing regula... 29 9.6
>CR457390-1|CAG33671.1| 346|Homo sapiens omains 2; complete cds,
incl. stopcodon. protein.
Length = 346
Score = 37.9 bits (84), Expect = 0.027
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C DC++ N +P+CA KS+ N C + +C+ ++ + +S G+C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
C C + P+C G GE S+ NEC + C+ + + +S+G C G
Sbjct: 91 CQFKCNNDYV-PVC-GSNGE---SYQNECYLRQAACKQQSEILVVSEGSCATDAG 140
>BC008973-1|AAH08973.1| 374|Homo sapiens transmembrane protein with
EGF-like and two follistatin-like domains 2 protein.
Length = 374
Score = 37.9 bits (84), Expect = 0.027
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C DC++ N +P+CA KS+ N C + +C+ ++ + +S G+C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
C C + P+C G GE S+ NEC + C+ + + +S+G C G
Sbjct: 91 CQFKCNNDYV-PVC-GSNGE---SYQNECYLRQAACKQQSEILVVSEGSCATDAG 140
>AY358907-1|AAQ89266.1| 374|Homo sapiens TenB2 protein.
Length = 374
Score = 37.9 bits (84), Expect = 0.027
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C DC++ N +P+CA KS+ N C + +C+ ++ + +S G+C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
C C + P+C G GE S+ NEC + C+ + + +S+G C G
Sbjct: 91 CQFKCNNDYV-PVC-GSNGE---SYQNECYLRQAACKQQSEILVVSEGSCATDAG 140
>AK074507-1|BAC11030.1| 374|Homo sapiens protein ( Homo sapiens
cDNA FLJ90026 fis, clone HEMBA1001221, highly similar to
Transmembrane protein with EGF-like and two
follistatin-like ).
Length = 374
Score = 37.9 bits (84), Expect = 0.027
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C DC++ N +P+CA KS+ N C + +C+ ++ + +S G+C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
C C + P+C G GE S+ NEC + C+ + + +S+G C G
Sbjct: 91 CQFKCNNDYV-PVC-GSNGE---SYQNECYLRQAACKQQSEILVVSEGSCATDAG 140
>AF242222-1|AAG49452.1| 374|Homo sapiens TPEF protein.
Length = 374
Score = 37.9 bits (84), Expect = 0.027
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C DC++ N +P+CA KS+ N C + +C+ ++ + +S G+C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
C C + P+C G GE S+ NEC + C+ + + +S+G C G
Sbjct: 91 CQFKCNNDYV-PVC-GSNGE---SYQNECYLRQAACKQQSEILVVSEGSCATDAG 140
>AF179274-1|AAD55776.2| 374|Homo sapiens transmembrane protein
TENB2 protein.
Length = 374
Score = 37.9 bits (84), Expect = 0.027
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C DC++ N +P+CA KS+ N C + +C+ ++ + +S G+C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
C C + P+C G GE S+ NEC + C+ + + +S+G C G
Sbjct: 91 CQFKCNNDYV-PVC-GSNGE---SYQNECYLRQAACKQQSEILVVSEGSCATDAG 140
>AC098617-1|AAX88893.1| 195|Homo sapiens unknown protein.
Length = 195
Score = 37.9 bits (84), Expect = 0.027
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C DC++ N +P+CA KS+ N C + +C+ ++ + +S G+C
Sbjct: 3 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 48
>AB017269-1|BAA87897.1| 374|Homo sapiens TMEFF2 protein.
Length = 374
Score = 37.9 bits (84), Expect = 0.027
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C DC++ N +P+CA KS+ N C + +C+ ++ + +S G+C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
C C + P+C G GE S+ NEC + C+ + + +S+G C G
Sbjct: 91 CQFKCNNDYV-PVC-GSNGE---SYQNECYLRQAACKQQSEILVVSEGSCATDAG 140
>AB004064-1|BAA90820.1| 368|Homo sapiens tomoregulin protein.
Length = 368
Score = 37.9 bits (84), Expect = 0.027
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C DC++ N +P+CA KS+ N C + +C+ ++ + +S G+C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVMSLGRC 227
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
C C + P+C G GE S+ NEC + C+ + + +S+G C G
Sbjct: 91 CQFKCNNDYV-PVC-GSNGE---SYQNECYLRQAACKQQSEILVVSEGSCATDAG 140
>AK222691-1|BAD96411.1| 374|Homo sapiens transmembrane protein with
EGF-like and two follistatin-like domains 2 variant
protein.
Length = 374
Score = 37.1 bits (82), Expect = 0.048
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 309
C DC++ N +P+CA KS+ N C + +C+ ++ + S G+C
Sbjct: 182 CNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVTSLGRC 227
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
C C + P+C G GE S+ NEC + C+ + + +S+G C G
Sbjct: 91 CQFKCNNDYV-PVC-GSNGE---SYQNECYLRQAACKQQSEILVVSEGSCATDAG 140
>X83961-1|CAA58791.1| 380|Homo sapiens transmembrane protein
protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.11
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 151 KKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
K AC C N P+C G G+ ++ NEC + C+H+ + I++G C +G
Sbjct: 96 KCACQFQC-HTNYIPVC-GSNGD---TYQNECFLRRAACKHQKEITVIARGPCYSDNG 148
>U19878-1|AAA64622.1| 380|Homo sapiens transmembrane protein
protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.11
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 151 KKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
K AC C N P+C G G+ ++ NEC + C+H+ + I++G C +G
Sbjct: 96 KCACQFQC-HTNYIPVC-GSNGD---TYQNECFLRRAACKHQKEITVIARGPCYSDNG 148
>BC035056-1|AAH35056.1| 380|Homo sapiens transmembrane protein with
EGF-like and two follistatin-like domains 1 protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.11
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 151 KKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
K AC C N P+C G G+ ++ NEC + C+H+ + I++G C +G
Sbjct: 96 KCACQFQC-HTNYIPVC-GSNGD---TYQNECFLRRAACKHQKEITVIARGPCYSDNG 148
>AL354917-2|CAI16192.1| 380|Homo sapiens transmembrane protein with
EGF-like and two follistatin-like domains 1 protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.11
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 151 KKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
K AC C N P+C G G+ ++ NEC + C+H+ + I++G C +G
Sbjct: 96 KCACQFQC-HTNYIPVC-GSNGD---TYQNECFLRRAACKHQKEITVIARGPCYSDNG 148
>AL353805-7|CAI12543.1| 380|Homo sapiens transmembrane protein with
EGF-like and two follistatin-like domains 1 protein.
Length = 380
Score = 35.9 bits (79), Expect = 0.11
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 151 KKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
K AC C N P+C G G+ ++ NEC + C+H+ + I++G C +G
Sbjct: 96 KCACQFQC-HTNYIPVC-GSNGD---TYQNECFLRRAACKHQKEITVIARGPCYSDNG 148
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 33.9 bits (74), Expect = 0.45
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 136 ADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPG 315
A+ + +C+ C K+ + A G ++ NEC + C + +R +S+G C
Sbjct: 187 AEGPGRASCV--CKKSPCPSVVAPVCGSDASTYSNECELQRAQCSQQRRIRLLSRGPCGS 244
Query: 316 SD 321
D
Sbjct: 245 RD 246
Score = 30.3 bits (65), Expect = 5.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 193 PICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSD 321
P+C G+ ++ N+CVM L+K+ GQC G D
Sbjct: 355 PVC----GDDGVTYENDCVMGRSGAARGLLLQKVRSGQCQGRD 393
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 33.9 bits (74), Expect = 0.45
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 136 ADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPG 315
A+ + +C+ C K+ + A G ++ NEC + C + +R +S+G C
Sbjct: 168 AEGPGRASCV--CKKSPCPSVVAPVCGSDASTYSNECELQRAQCSQQRRIRLLSRGPCGS 225
Query: 316 SD 321
D
Sbjct: 226 RD 227
Score = 30.3 bits (65), Expect = 5.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 193 PICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSD 321
P+C G+ ++ N+CVM L+K+ GQC G D
Sbjct: 336 PVC----GDDGVTYENDCVMGRSGAARGLLLQKVRSGQCQGRD 374
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 33.9 bits (74), Expect = 0.45
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 136 ADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPG 315
A+ + +C+ C K+ + A G ++ NEC + C + +R +S+G C
Sbjct: 187 AEGPGRASCV--CKKSPCPSVVAPVCGSDASTYSNECELQRAQCSQQRRIRLLSRGPCGS 244
Query: 316 SD 321
D
Sbjct: 245 RD 246
Score = 30.3 bits (65), Expect = 5.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 193 PICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSD 321
P+C G+ ++ N+CVM L+K+ GQC G D
Sbjct: 355 PVC----GDDGVTYENDCVMGRSGAARGLLLQKVRSGQCQGRD 393
>AF525689-1|AAN77133.1| 988|Homo sapiens signal
peptide-CUB-EGF-like domain containing protein 1
protein.
Length = 988
Score = 32.3 bits (70), Expect = 1.4
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 11/86 (12%)
Frame = +1
Query: 88 VAVSCRPDKLDLKQVKADAER-----KKACMHDCTKANLDPICAGKTGEKPKSFGNECV- 249
VA CRP DL Q + D C H C + P C P S G C+
Sbjct: 185 VACDCRPG-FDLAQNQKDCTLTCNYGNGGCQHSCEDTDTGPTCGCHQKYAPHSDGRTCIE 243
Query: 250 ---MNNYNCEH--KDTLRKISQGQCP 312
+NN C+ KDT + + CP
Sbjct: 244 TCAVNNGGCDRTCKDTATGV-RCSCP 268
>DQ133599-1|AAZ43216.1| 175|Homo sapiens transmembrane protein with
EGF-like and two follistatin-like domains 2 secreted
protein.
Length = 175
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
C C + P+C G GE S+ NEC + C+ + + +S+G C G
Sbjct: 91 CQFKCNNDYV-PVC-GSNGE---SYQNECYLRQAACKQQSEILVVSEGSCATDAG 140
>AC092644-1|AAY14874.1| 178|Homo sapiens unknown protein.
Length = 178
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 160 CMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDG 324
C C + P+C G GE S+ NEC + C+ + + +S+G C G
Sbjct: 91 CQFKCNNDYV-PVC-GSNGE---SYQNECYLRQAACKQQSEILVVSEGSCATDAG 140
>CR541813-1|CAG46612.1| 317|Homo sapiens FST protein.
Length = 317
Score = 29.9 bits (64), Expect = 7.3
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 94 VSCRPDKLDLKQVKADAERKKACMHDCTKANLD-PICAGKTGEKPKSFGNECVMNNYNCE 270
V C P+K + K + R C DC+ P+C G K++ NEC + C+
Sbjct: 98 VDCGPEK-KCRMNKKNKPRC-VCAPDCSNITWKGPVC----GLDGKTYCNECALLKARCK 151
Query: 271 HKDTLRKISQGQC 309
+ L QG+C
Sbjct: 152 EQPELEVQYQGRC 164
>X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila Fat
protein protein.
Length = 4590
Score = 29.5 bits (63), Expect = 9.6
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 148 RKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDGI 327
R C+ C + P+ G + P G+ECV + + +H GQCPGS +
Sbjct: 3778 RAAVCL--CKEGRCPPVHHG-CEDDPCPEGSECVSDPWEEKHTCVCPSGRFGQCPGSSSM 3834
Query: 328 RLS 336
L+
Sbjct: 3835 TLT 3837
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 29.5 bits (63), Expect = 9.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 136 PSPASGPACRDGTTPPRTTQRKHRK*WSSYWNE 38
P+PA+ PA + PP T Q + K W Y+ +
Sbjct: 596 PAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKK 628
>U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2
protein.
Length = 652
Score = 29.5 bits (63), Expect = 9.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 136 PSPASGPACRDGTTPPRTTQRKHRK*WSSYWNE 38
P+PA+ PA + PP T Q + K W Y+ +
Sbjct: 538 PAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKK 570
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 29.5 bits (63), Expect = 9.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 136 PSPASGPACRDGTTPPRTTQRKHRK*WSSYWNE 38
P+PA+ PA + PP T Q + K W Y+ +
Sbjct: 596 PAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKK 628
>AF093748-1|AAD29862.1| 140|Homo sapiens KH type splicing
regulatory protein protein.
Length = 140
Score = 29.5 bits (63), Expect = 9.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 136 PSPASGPACRDGTTPPRTTQRKHRK*WSSYWNE 38
P+PA+ PA + PP T Q + K W Y+ +
Sbjct: 25 PAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKK 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,518,551
Number of Sequences: 237096
Number of extensions: 1671481
Number of successful extensions: 8500
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 8220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8480
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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