Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d14r
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 68 8e-12
AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical... 48 7e-06
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 35 0.073
Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical p... 34 0.096
Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical pr... 34 0.096
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 34 0.096
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 34 0.096
Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 32 0.39
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 30 1.6
U21324-9|AAA62560.2| 755|Caenorhabditis elegans Coenzyme q (ubi... 30 1.6
U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 29 2.7
Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical ... 29 3.6
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone deace... 28 8.3
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 67.7 bits (158), Expect = 8e-12
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Frame = -2
Query: 656 NADAAVTYWLTSGAPSQKIVLSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEG 477
N D++ YW G P +KI++ + T+GR W L + + + P + P + YV+ G
Sbjct: 277 NVDSSARYWNQKGMPKEKIIVGMPTYGRGWTL---NNASAINPGTSGSPAKITQYVQEAG 333
Query: 476 LLSYPEVCGKLINPNQQKGMRPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTA 297
+ +Y E C L N + R+ ++P +G W SY+D ++
Sbjct: 334 VGAYFEFCEMLAN----------------GATRYWDSQSQVP-YLVQGNQWWSYDDEESF 376
Query: 296 GQKAAYVKSKNLGGVAIVDLSLDDFRGLCT---GDKYPIL 186
K AYVK + GG + L DDF C+ G YP++
Sbjct: 377 ANKMAYVKREGYGGAFVWTLDFDDFNAGCSNSNGQLYPLI 416
>AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical
protein Y22D7AL.14 protein.
Length = 264
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = -2
Query: 341 GEGGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDDFRGLCTGDKYPIL 186
G+ GIWVSYE+ + K A+ + +GGV + + DD G C YP+L
Sbjct: 204 GDDGIWVSYENQQSILAKMAFARKLQVGGVMVFSIGSDDVTGKCGHGPYPLL 255
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 34.7 bits (76), Expect = 0.073
Identities = 46/184 (25%), Positives = 68/184 (36%), Gaps = 5/184 (2%)
Frame = -2
Query: 761 YVNVGAYDYYTPTRNN--KEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 588
++N+ A DYY P + +PIY R N D + S K + I
Sbjct: 257 FINIFAMDYYGPWASGWGNPTGPISPIYGGSERREQWNVDNTAAIYSCETMRSSKFNIVI 316
Query: 587 ATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQ---QKGM 417
F R W G P D PG+ V L + G++ P + QKG
Sbjct: 317 PFFARLW------NNVGKP---IDFPGKE---VYRNVTLIDGKAVGEVYMPRRSALQKGY 364
Query: 416 RPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDL 237
D S+ Y N ++++E + K YV++ NLGGV I +
Sbjct: 365 NLSSYNYDDLSETAFIY-------NSTTKEYLTFEVKRSIAAKLDYVQNMNLGGVWIWQM 417
Query: 236 SLDD 225
+DD
Sbjct: 418 DMDD 421
>Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 34.3 bits (75), Expect = 0.096
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 3/182 (1%)
Frame = -2
Query: 761 YVNVGAYDYYTPTRNNKEADY---TAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLS 591
++N + DYYTP +N D +APIY +N + + K +
Sbjct: 241 FINAYSTDYYTPLADNLSDDIAGPSAPIYFGAQGKSERNVHHTARNYSCLTKQASKFNIV 300
Query: 590 IATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRP 411
I + W+ ++ + ++ A Y +T G + K Q+G +
Sbjct: 301 IPFYATLWENVYETVLDSKRGVYRH---VAPFYGRTVGKTYLSRLAVK------QEGFQV 351
Query: 410 HLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSL 231
DP+ R +++ N GI++++E ++ K YVK + LGGV I + +
Sbjct: 352 ESYSY-DPAPR-AAFSY-----NRTIGIYLTFETKESIRAKIDYVKDRILGGVWIFSVDM 404
Query: 230 DD 225
DD
Sbjct: 405 DD 406
>Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 34.3 bits (75), Expect = 0.096
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 3/182 (1%)
Frame = -2
Query: 761 YVNVGAYDYYTPTRNNKEADY---TAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLS 591
++N + DYYTP +N D +APIY +N + + K +
Sbjct: 241 FINAYSTDYYTPLADNLSDDIAGPSAPIYFGAQGKSERNVHHTARNYSCLTKQASKFNIV 300
Query: 590 IATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRP 411
I + W+ ++ + ++ A Y +T G + K Q+G +
Sbjct: 301 IPFYATLWENVYETVLDSKRGVYRH---VAPFYGRTVGKTYLSRLAVK------QEGFQV 351
Query: 410 HLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSL 231
DP+ R +++ N GI++++E ++ K YVK + LGGV I + +
Sbjct: 352 ESYSY-DPAPR-AAFSY-----NRTIGIYLTFETKESIRAKIDYVKDRILGGVWIFSVDM 404
Query: 230 DD 225
DD
Sbjct: 405 DD 406
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 34.3 bits (75), Expect = 0.096
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 5/184 (2%)
Frame = -2
Query: 761 YVNVGAYDYYTPTRNNKEADYT---APIY--TPQNRNPLQNADAAVTYWLTSGAPSQKIV 597
++NV YDYY + K YT AP+Y + + + NAD ++ ++ + ++
Sbjct: 1143 FINVMTYDYYGAWES-KWGAYTGTPAPLYFGSLKGFSGKLNADFSMKFYACNTKKPSQLT 1201
Query: 596 LSIATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGM 417
+ + +GR WK + A T P + G Y G + + L KG
Sbjct: 1202 MGVPFYGRYWKNVLEPIDASDNMWRTAAP-QNGKY--EGGYVGW----RNLEKEGWNKGS 1254
Query: 416 RPHLRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDL 237
+K P Y N +++ +E+ + +K Y ++NLGG+ I L
Sbjct: 1255 ATWHKKTKTP------YIM-----NNGARMFLGFENERSLKEKMDYATNRNLGGLMIWAL 1303
Query: 236 SLDD 225
LDD
Sbjct: 1304 DLDD 1307
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical protein
C25A8.4 protein.
Length = 1067
Score = 34.3 bits (75), Expect = 0.096
Identities = 13/37 (35%), Positives = 26/37 (70%)
Frame = -2
Query: 290 KAAYVKSKNLGGVAIVDLSLDDFRGLCTGDKYPILRA 180
K Y++ + LGG+A+ +++ DD+ G+C +PIL++
Sbjct: 1024 KIGYIQREQLGGIAL-NVNGDDYTGICGRGSFPILKS 1059
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -2
Query: 323 VSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDDFRGLCTG-DKYPILRA 180
V+YE+ +A KA + + +GG+A+ ++ DD +C +PIL A
Sbjct: 671 VAYENTRSAHIKAVWASMEGVGGLALHNMHQDDPSAVCDNRTAFPILNA 719
>Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical
protein C08H9.6 protein.
Length = 394
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = -2
Query: 329 IWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 225
I++++E+ + +K YV++KN+GG+ I ++ DD
Sbjct: 322 IFLAFENEKSLSEKVIYVRNKNIGGLVIWNVDQDD 356
>Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.13 protein.
Length = 459
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -2
Query: 761 YVNVGAYDYYTPTR--NNKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 588
++NV Y YY P N K AP+Y NR +N D + Y + K+ +++
Sbjct: 275 FLNVLTYGYYAPWSGVNGKFVGPNAPLYGG-NR---ENVDETMQYLICKTRTPSKLNMAL 330
Query: 587 ATFGRTWK 564
+ +GR W+
Sbjct: 331 SFYGRYWE 338
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.39
Identities = 45/202 (22%), Positives = 69/202 (34%), Gaps = 12/202 (5%)
Frame = -2
Query: 761 YVNVGAYDYYTPTRNN--KEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 588
++NV + DYY PT+N+ K TAP++ N D S K ++I
Sbjct: 240 FINVFSLDYYGPTQNDFGKITGPTAPMFNGVPGRETFNVDHTSKVLSCETMQSNKFNIAI 299
Query: 587 ATFGRTWKLDADSEIAGVPPIHTDGPGEAGPYVKTEGLLSYPEVCGKLINPNQQKGMRPH 408
+ W+ GP K E + +V GK++ + M
Sbjct: 300 PFYTTLWE------------------NVQGPIDKIEIFRNVNKVHGKIVGQSHMSRMIVQ 341
Query: 407 LRKVTDPSKRFGTYAFRLPDDNGEGGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLD 228
+ F N I++++E + K YV LGG+ I + D
Sbjct: 342 QKGFVLTPYSFDNATRNAFIYNSSTKIYLTFETDQSIVAKIEYVSEHLLGGICIWTVDKD 401
Query: 227 D----------FRGLCTGDKYP 192
D F GLCT P
Sbjct: 402 DEGNSQLNAISFDGLCTTGNVP 423
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 323 VSYEDPDTAGQ--KAAYVKSKNLGGVAIVDLSLDD 225
V+ +D G+ KA YVKSKNLGGV I + DD
Sbjct: 200 VTLQDDRAIGEASKANYVKSKNLGGVWIWTMEHDD 234
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 326 WVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDDFRG 216
+V YE+ ++ K Y+ N+GGV I + DD +G
Sbjct: 344 FVGYENAESLKHKVDYIVENNIGGVMIWAIDFDDDQG 380
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = -2
Query: 761 YVNVGAYDYYTPTRN--NKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 588
++N+ + DYY P +N +PIY N ++ + S+K + I
Sbjct: 250 FINIYSMDYYGPWKNPYGNPTGPISPIYNGAQGREAYNVHSSALTYSCKVKQSKKFNIVI 309
Query: 587 ATFGRTWK 564
F R WK
Sbjct: 310 PFFARLWK 317
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 326 WVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 225
++++E DT K YVK + LGGV I + +DD
Sbjct: 311 FLTFETNDTIAAKIDYVKDRILGGVWIWGVDMDD 344
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 344 NGEGGIWVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDDFR 219
N ++++E + K YV +KNLGGV I + +DD R
Sbjct: 338 NNSTKTFLAFETEKSIHAKIEYVMNKNLGGVWIWSVDMDDER 379
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 326 WVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 225
++++E DT K YVK + LGGV I + +DD
Sbjct: 388 FLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDD 421
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 326 WVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 225
++++E DT K YVK + LGGV I + +DD
Sbjct: 386 FLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDD 419
>U21324-9|AAA62560.2| 755|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 8 protein.
Length = 755
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 531 RDSRNFAVSVQFPGTTEGRD 590
+D RN AV VQ+PG EG D
Sbjct: 449 KDGRNVAVKVQYPGVAEGID 468
>U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical
protein C45E5.2 protein.
Length = 469
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2
Query: 326 WVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 225
++++E + KA YVKS NLGGV I + DD
Sbjct: 311 FITFETEKSIEAKANYVKSMNLGGVWIWLMENDD 344
>Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical
protein R09D1.5 protein.
Length = 429
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = -2
Query: 761 YVNVGAYDYYTPTRN--NKEADYTAPIYTPQNRNPLQNADAAVTYWLTSGAPSQKIVLSI 588
+VNV + DYY P N +AP+Y N D+ + Y+ K + I
Sbjct: 239 FVNVFSMDYYGPWPNQWGTPTGPSAPLYGGIGVKKHFNVDSTMKYYTCMTEDPSKFNMVI 298
Query: 587 ATFGRTWK 564
+ R WK
Sbjct: 299 PFYVRLWK 306
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = -2
Query: 761 YVNVGAYDYYTPTRNNKEADYT---APIY--TPQNRNPLQNADAAVTYWLTSGAPSQKIV 597
++NV YDYY + K YT AP+Y + + + NAD ++ ++ ++
Sbjct: 1680 FINVMTYDYYGAWES-KWGAYTGTPAPLYFGSLKGFSGKLNADFSMKFYACKTEKPSQLN 1738
Query: 596 LSIATFGRTWK 564
+ + +GR WK
Sbjct: 1739 MGVPFYGRYWK 1749
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 326 WVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 225
++ +E+ + +K Y +NLGG+ I L LDD
Sbjct: 1811 FLGFENERSLKEKMKYATDRNLGGLMIWALDLDD 1844
>Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = -3
Query: 481 KVCSVTQKSAVS*STPTSRRECVLTSGRLLTPASVSEHTPSVFLMTTVRVAFGYHTRILI 302
++ S T+ +++ STP S RE + GR + P + + +T F YHTR+
Sbjct: 193 RIASATKWTSIPTSTP-SYREHLQAFGR-------AGGVPLLHITSTTSEPFSYHTRLHA 244
Query: 301 LLARKLLTSSQRISVVSLL 245
L +RK+ S+ SV LL
Sbjct: 245 LNSRKIRPSNDH-SVSILL 262
>AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical
protein T10D4.3 protein.
Length = 410
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 326 WVSYEDPDTAGQKAAYVKSKNLGGVAI 246
+V++E + +K YVK KNLGGV I
Sbjct: 347 FVTFETDKSIQEKMKYVKEKNLGGVWI 373
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 323 VSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 225
+++E + +K Y+K N+GGV + + +DD
Sbjct: 760 LTFETDRSINEKTKYIKRVNIGGVCLWAVDMDD 792
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 323 VSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 225
+++E + +K Y+K N+GGV + + +DD
Sbjct: 707 LTFETDRSINEKTKYIKRVNIGGVCLWAVDMDD 739
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 326 WVSYEDPDTAGQKAAYVKSKNLGGVAIVDLSLDD 225
++++E+ + +K YV NLGGV I + +DD
Sbjct: 372 FLTFENERSIEKKLQYVNEMNLGGVWIWSVDMDD 405
>AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone
deacetylase protein 4 protein.
Length = 755
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 489 NVWSSFAGTISVDWRDSRNFAVSVQFPGTTEGRDRQYYLLAWSTAREPVCDS 644
N + V D++ V+V F G RD +Y L AW T EPV S
Sbjct: 562 NFFPGTGSVTEVGKNDAKGLTVNVPFSGDVM-RDPEY-LAAWRTVIEPVMAS 611
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,226,762
Number of Sequences: 27780
Number of extensions: 425819
Number of successful extensions: 1195
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -