Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d10f
         (552 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   5.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   5.4  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   5.4  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   5.4  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   5.4  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 291 PNSEEKVPDGNITQTGSKTGS 353
           P  +   P GNIT  GS T S
Sbjct: 243 PQMQSYRPTGNITPHGSNTSS 263


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 199 PGSKTSAPISSPPYSMPFGP 140
           PG K   P S+P Y  P  P
Sbjct: 97  PGGKAEVPPSNPIYIHPESP 116


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 220 VMHKRIPQKLIYQQLWASDQLHTSQIPKKRFLMATSRKPAVK 345
           + HK I Q      LWA  + +T+++ +   L  T  +  ++
Sbjct: 210 LFHKAILQSGCALNLWARSRRYTTELGQVLGLQTTDERKVLE 251


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 220 VMHKRIPQKLIYQQLWASDQLHTSQIPKKRFLMATSRKPAVK 345
           + HK I Q      LWA  + +T+++ +   L  T  +  ++
Sbjct: 210 LFHKAILQSGCALNLWARSRRYTTELGQVLGLQTTDERKVLE 251


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 220 VMHKRIPQKLIYQQLWASDQLHTSQIPKKRFLMATSRKPAVK 345
           + HK I Q      LWA  + +T+++ +   L  T  +  ++
Sbjct: 210 LFHKAILQSGCALNLWARSRRYTTELGQVLGLQTTDERKVLE 251


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 220 VMHKRIPQKLIYQQLWASDQLHTSQIPKKRFLMATSRKPAVK 345
           + HK I Q      LWA  + +T+++ +   L  T  +  ++
Sbjct: 210 LFHKAILQSGCALNLWARSRRYTTELGQVLGLQTTDERKVLE 251


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 220 VMHKRIPQKLIYQQLWASDQLHTSQIPKKRFLMATSRKPAVK 345
           + HK I Q      LWA  + +T+++ +   L  T  +  ++
Sbjct: 209 LFHKAILQSGCALNLWARSRRYTTELGQVLGLQTTDERKVLE 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,313
Number of Sequences: 336
Number of extensions: 3120
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)