Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d10f
(552 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 49 3e-06
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 46 2e-05
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 46 2e-05
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 46 2e-05
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 46 2e-05
12_02_1282 + 27528159-27529148,27529549-27529614 46 2e-05
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 45 5e-05
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 44 8e-05
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 44 1e-04
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 44 1e-04
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 43 2e-04
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 40 0.001
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 39 0.002
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 32 0.35
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 30 1.1
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 29 2.5
03_06_0505 - 34397054-34397087,34397127-34397474,34397650-343977... 29 3.3
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 28 4.3
04_04_1613 - 34779640-34779747,34780086-34780151,34781155-347812... 28 4.3
04_01_0401 - 5260308-5260361,5260457-5260507,5260764-5260809,526... 28 4.3
11_01_0187 - 1474695-1474774,1475183-1475456 28 5.7
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 28 5.7
03_05_0003 - 19430085-19430210,19430902-19431060,19431269-194313... 28 5.7
11_04_0004 + 12013207-12013280,12013311-12013756,12013865-12014715 27 10.0
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +3
Query: 156 LYGGDEIGALVFDPGHHSLRVGYAQEDTPKADIPAV 263
+YGGDE+ A+V D G +S + GYA +DTPKA P++
Sbjct: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 381 ELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLFTE 533
EL R MEV + MKDG V +WD+ + + ++ + + + HP+L E
Sbjct: 124 ELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAE 174
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/124 (29%), Positives = 56/124 (45%)
Frame = +3
Query: 165 GDEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSK 344
G++I LV D G ++ G+A +D P+A P++VG T + V G Q +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-----MVGMG---QKDAY 55
Query: 345 TGSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVL 524
G E + + L P ++ G V NWD EK+ + + +R HPVL
Sbjct: 56 VGDEAQSKRGILTLKYP---------IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVL 106
Query: 525 FTEA 536
TEA
Sbjct: 107 LTEA 110
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/124 (29%), Positives = 56/124 (45%)
Frame = +3
Query: 165 GDEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSK 344
G++I LV D G ++ G+A +D P+A P++VG T + V G Q +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-----MVGMG---QKDAY 55
Query: 345 TGSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVL 524
G E + + L P ++ G V NWD EK+ + + +R HPVL
Sbjct: 56 VGDEAQSKRGILTLKYP---------IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVL 106
Query: 525 FTEA 536
TEA
Sbjct: 107 LTEA 110
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 46.4 bits (105), Expect = 2e-05
Identities = 36/124 (29%), Positives = 57/124 (45%)
Frame = +3
Query: 165 GDEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSK 344
G++I LV D G ++ G+A +D P+A P++VG T + V G Q +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-----MVGMG---QKDAY 55
Query: 345 TGSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVL 524
G E + + L P ++ G V+NWD EK+ + + +R HP+L
Sbjct: 56 VGDEAQSKRGILTLKYP---------IEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPIL 106
Query: 525 FTEA 536
TEA
Sbjct: 107 LTEA 110
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/124 (29%), Positives = 56/124 (45%)
Frame = +3
Query: 165 GDEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSK 344
G++I LV D G ++ G+A +D P+A P++VG T + V G Q +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-----MVGMG---QKDAY 55
Query: 345 TGSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVL 524
G E + + L P ++ G V NWD EK+ + + +R HPVL
Sbjct: 56 VGDEAQSKRGILTLKYP---------IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVL 106
Query: 525 FTEA 536
TEA
Sbjct: 107 LTEA 110
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 46.0 bits (104), Expect = 2e-05
Identities = 37/123 (30%), Positives = 56/123 (45%)
Frame = +3
Query: 168 DEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSKT 347
D+I LV D G ++ G+A +D P+A P++VG T + V G Q +
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-----MVGMG---QKDAYV 56
Query: 348 GSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLF 527
G E + + L P ++ G V+NWD EK+ + + +R HPVL
Sbjct: 57 GDEAQSKRGILTLKYP---------IEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLL 107
Query: 528 TEA 536
TEA
Sbjct: 108 TEA 110
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 44.8 bits (101), Expect = 5e-05
Identities = 36/124 (29%), Positives = 55/124 (44%)
Frame = +3
Query: 165 GDEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSK 344
G++I LV D G ++ G+A +D P+A P++VG T + V G Q +
Sbjct: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-----MVGMG---QKDAY 55
Query: 345 TGSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVL 524
G E + + L P ++ G V NWD EK+ + + +R HP L
Sbjct: 56 VGDEAQSKRGILTLKYP---------IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPAL 106
Query: 525 FTEA 536
TEA
Sbjct: 107 LTEA 110
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 44.0 bits (99), Expect = 8e-05
Identities = 36/123 (29%), Positives = 55/123 (44%)
Frame = +3
Query: 168 DEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSKT 347
++I LV D G ++ G+A +D P+A P++VG T + V G Q +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-----MVGMG---QKDAYV 56
Query: 348 GSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLF 527
G E + + L P ++ G V NWD EK+ + + +R HPVL
Sbjct: 57 GDEAQSKRGILTLKYP---------IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLL 107
Query: 528 TEA 536
TEA
Sbjct: 108 TEA 110
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 43.6 bits (98), Expect = 1e-04
Identities = 35/123 (28%), Positives = 55/123 (44%)
Frame = +3
Query: 168 DEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSKT 347
++I LV D G ++ G+A +D P+A P++VG T + V G Q +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-----MVGMG---QKDAYV 56
Query: 348 GSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLF 527
G E + + L P ++ G V NWD EK+ + + +R HP+L
Sbjct: 57 GDEAQSKRGILTLKYP---------IEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILL 107
Query: 528 TEA 536
TEA
Sbjct: 108 TEA 110
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 43.6 bits (98), Expect = 1e-04
Identities = 35/123 (28%), Positives = 56/123 (45%)
Frame = +3
Query: 168 DEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSKT 347
++I +V D G ++ G+A +D P+A P++VG T + V G Q +
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-----MVGMG---QKDAYV 55
Query: 348 GSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLF 527
G E + + L P ++ G V+NWD EK+ + + +R HPVL
Sbjct: 56 GDEAQSKRGILTLKYP---------IEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 528 TEA 536
TEA
Sbjct: 107 TEA 109
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 42.7 bits (96), Expect = 2e-04
Identities = 35/123 (28%), Positives = 56/123 (45%)
Frame = +3
Query: 168 DEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSKT 347
++I +V D G ++ G+A +D P+A P++VG T + V G Q +
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV-----MVGMG---QKDAYV 55
Query: 348 GSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLF 527
G E + + L P ++ G V+NWD EK+ + + +R HPVL
Sbjct: 56 GDEAQAKRGILTLKYP---------IEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLL 106
Query: 528 TEA 536
TEA
Sbjct: 107 TEA 109
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Frame = +3
Query: 180 ALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSKTGSEL 359
A+V D G ++G++ P IP VV V + + SE I Q + ++L
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNES-FLDQSEMCSSANWIAQYNAGVMADL 66
Query: 360 RHYIDVTELHVPRP-GMEVQTY-MKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLFTE 533
+I L + + G+ + + + GQVD+WD E+ C +R H L T+
Sbjct: 67 DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTD 126
Query: 534 AVWAT 548
+ +T
Sbjct: 127 SPVST 131
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 39.1 bits (87), Expect = 0.002
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Frame = +3
Query: 180 ALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGN-ITQTGSKTGSE 356
A+V D G ++G+A P P VV V T + GN + Q + ++
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVND-TFAGQTRANTTKGNWMAQHSAGVMAD 66
Query: 357 LRHYIDVTELHVPRPGMEVQ-TY-MKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLFT 530
L +I L R +Y + +GQV+NWD E+ C +R H L T
Sbjct: 67 LDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLT 126
Query: 531 EA 536
E+
Sbjct: 127 ES 128
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 31.9 bits (69), Expect = 0.35
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 381 ELHVPRPGMEVQTY---MKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLFTE 533
E H P PG Q MKDG +WD+ + + ++ + + + HP+L E
Sbjct: 76 EAHRPPPGSPRQPVISPMKDGTFIDWDIVDNIWNHAFRQRLLINPEEHPMLIVE 129
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/117 (24%), Positives = 47/117 (40%)
Frame = +3
Query: 183 LVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQTGSKTGSELR 362
+V D G + R+G+A E P+ +V H + E +T G T L
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQ--RPRHRSSGE------TVTVVGD-TDPALM 72
Query: 363 HYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLFTE 533
Y D T + P D V ++ E +LD+ + ++ + HP+L TE
Sbjct: 73 KYFDCTRSAIRSP-------FDDDVVYQFEYMEYILDFGFDRLGATSEVGHPILMTE 122
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 396 RPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLFTE 533
R MEV + MKDG +WD+ + + ++ +S + HP+L E
Sbjct: 66 RDHMEVISPMKDGTFIDWDIVDNIWNHAFSFY----AEEHPMLIVE 107
>03_06_0505 -
34397054-34397087,34397127-34397474,34397650-34397757,
34397847-34398161,34399027-34399442,34399531-34400946
Length = 878
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 339 SKTGSELRHYIDVTELHVPRPGMEVQTYMKDGQVDN 446
S G+ + ++ +T H+P PG ++ Y ++ Q DN
Sbjct: 814 SSNGAAISGFVPMTNSHLPSPGSKL--YTRESQADN 847
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 396 RPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRSPSXHHPVLFTE 533
R MEV + MKDG +WD+ + + ++ +S HP+L E
Sbjct: 165 RDHMEVISPMKDGTFIDWDIVDNIWNHAFSFY----PEEHPMLIVE 206
>04_04_1613 -
34779640-34779747,34780086-34780151,34781155-34781214,
34781690-34781795,34781965-34782110,34782934-34783016,
34783157-34783194,34783441-34783472,34783732-34783828,
34783951-34784234,34784752-34784904
Length = 390
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 193 ILVIIRCELVMHKRIPQKLIYQQL-WASDQLHTSQIPKKRFLMATSRKPAVKR 348
I IIR ++M K + L ++ W SD+L+ + F M SRK +KR
Sbjct: 91 IQAIIRYNIMMWKAVGMHLDKVEIIWFSDELNHHAVDYWPFAMDVSRKYTMKR 143
>04_01_0401 -
5260308-5260361,5260457-5260507,5260764-5260809,
5260884-5260933,5261019-5261062,5261231-5261310,
5261391-5261461,5261636-5261725,5262367-5262498,
5263420-5263470,5263615-5263704,5263841-5263878,
5265882-5266002,5267653-5267960,5268742-5268820,
5270019-5270113,5270288-5270428,5270792-5270831
Length = 526
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 183 LVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVP 314
+V +PG ++R+G+A +D P +IP + A HI ++ P
Sbjct: 9 VVINPGSSNVRIGFASQDVP-FNIPHCI----ARHITQQKDDTP 47
>11_01_0187 - 1474695-1474774,1475183-1475456
Length = 117
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 135 MSGPNGMLYGGDEIGALVFDPGHHSLRVGY 224
M G N YG +G L F PG + RV Y
Sbjct: 71 MEGDNSQAYGLLFLGILAFLPGFYETRVAY 100
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 27.9 bits (59), Expect = 5.7
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 168 DEIGALVFDPGHHSLRVGYAQEDTPKADIPAVVGVGPATHIPNSEEKVPDGNITQ-TGSK 344
D +V D G ++ G+A E+ P + P VVG + EE + + +T
Sbjct: 2 DSGNVVVCDNGTGYVKCGFAGENFPTSVFPCVVG----RPLLRYEESLQEQELTDIVVGA 57
Query: 345 TGSELRHYIDVT 380
++LRH +DV+
Sbjct: 58 ACADLRHQLDVS 69
>03_05_0003 -
19430085-19430210,19430902-19431060,19431269-19431358,
19431433-19431603,19431655-19431797,19431831-19431923,
19431963-19432279,19432819-19432885,19433039-19433204
Length = 443
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 336 GSKTGSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRS 500
GSK+ H D E+ +P + +KDG D F+K ++ ++K+ RS
Sbjct: 87 GSKSSGGSHHGSDEEEVTMPVFDANLLAGVKDGLESACDYFDKCINQKFTKLERS 141
>11_04_0004 + 12013207-12013280,12013311-12013756,12013865-12014715
Length = 456
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 336 GSKTGSELRHYIDVTELHVPRPGMEVQTYMKDGQVDNWDLFEKMLDYCYSKVIRS 500
GSK+ H D ++ +P + +KDG D F+K ++ ++K+ RS
Sbjct: 34 GSKSSGGSHHGSDEEDVTMPVFDANLPAGVKDGLESACDYFDKCINQKFTKLERS 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,642,785
Number of Sequences: 37544
Number of extensions: 339302
Number of successful extensions: 943
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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