Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d09r
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 34 0.12
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 33 0.16
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 33 0.16
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 33 0.16
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 33 0.21
U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450... 32 0.48
U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 30 2.0
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 30 2.0
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 30 2.0
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical p... 29 3.4
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical ... 29 4.5
U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop heli... 28 7.9
U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop heli... 28 7.9
AL021469-3|CAA16290.2| 435|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = -1
Query: 368 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAEPTETTSTN 192
+ + FN +LK NLP +EG + LK T P++ +K+ E S +PV + T+ N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368
Query: 191 VSREEMEFTTESNVRDVDVGLETAQKTNEIAKA 93
V ++ T + TA + +A A
Sbjct: 369 VEDDDSSSTITQFESSFNKPKTTAPRLAPVAAA 401
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -1
Query: 311 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREEM-EFTTESNVRDVDV 135
+E S + DV KI PL+Q Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 134 GLETAQKTNEI 102
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 290 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREEM-EFTTESNVRDVDVGLETAQK 114
+ DV K+ PL+Q Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 113 TNEI 102
E+
Sbjct: 3508 QQEV 3511
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/58 (22%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = -1
Query: 257 KQKQPEDSKRPVAEPTETTSTNVSREEMEFTTESNV---RDVDVGLETAQKTNEIAKA 93
K K+P++ K+ + + +TT + +E+ + ES + D+ + L+T ++++++ A
Sbjct: 10170 KTKEPKEKKKIIKKKKDTTKPQEASKELS-SDESRIDLESDISLSLDTVTESDDLSTA 10226
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -1
Query: 311 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREEM-EFTTESNVRDVDV 135
+E S + DV KI PL+Q Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 134 GLETAQKTNEI 102
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 290 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREEM-EFTTESNVRDVDVGLETAQK 114
+ DV K+ PL+Q Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 113 TNEI 102
E+
Sbjct: 3508 QQEV 3511
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/58 (22%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = -1
Query: 257 KQKQPEDSKRPVAEPTETTSTNVSREEMEFTTESNV---RDVDVGLETAQKTNEIAKA 93
K K+P++ K+ + + +TT + +E+ + ES + D+ + L+T ++++++ A
Sbjct: 10190 KTKEPKEKKKIIKKKKDTTKPQEASKELS-SDESRIDLESDISLSLDTVTESDDLSTA 10246
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -1
Query: 311 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREEM-EFTTESNVRDVDV 135
+E S + DV KI PL+Q Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 134 GLETAQKTNEI 102
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 290 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREEM-EFTTESNVRDVDVGLETAQK 114
+ DV K+ PL+Q Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 113 TNEI 102
E+
Sbjct: 3508 QQEV 3511
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/58 (22%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = -1
Query: 257 KQKQPEDSKRPVAEPTETTSTNVSREEMEFTTESNV---RDVDVGLETAQKTNEIAKA 93
K K+P++ K+ + + +TT + +E+ + ES + D+ + L+T ++++++ A
Sbjct: 10190 KTKEPKEKKKIIKKKKDTTKPQEASKELS-SDESRIDLESDISLSLDTVTESDDLSTA 10246
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 689 LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 600
L LC LLA SA YY S + PY++Y P
Sbjct: 5 LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34
>U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450
family protein 14A5 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +2
Query: 248 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 352
AF + G F R R P L HP G VFSS D
Sbjct: 82 AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116
>U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical
protein T26A8.1 protein.
Length = 708
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -1
Query: 212 TETTSTNVSREEMEFTTESNVRDVDVGL-ETAQKTNEI---AKAVEATTYAVNIRDDAEF 45
TET ST V + TT +DV ++ + TN + + A+E Y N +D+ F
Sbjct: 352 TETPSTTVITTTIPSTTSEPEATIDVKTRDSKEDTNGVLPTSSAIETPPYPENCPEDSLF 411
Query: 44 LP 39
LP
Sbjct: 412 LP 413
>AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical
protein F52G3.5 protein.
Length = 386
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -1
Query: 257 KQKQPEDSKRPVAEPTETTSTNVSREEMEFTTESNVRDVDVGLETAQKTNE 105
+ K+P+ +K T T + + EE TTE +V D++ ++ E
Sbjct: 215 RSKRPKTTKTTTTSTTTTEAPTTTTEEYTTTTEEDVTDLETQAPNVEEVTE 265
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -1
Query: 302 SWVY--EKD-VLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREEMEFTTESNVRDV 141
SW Y +KD + F +++ E+ K+PV + + N E+E T + +++DV
Sbjct: 686 SWFYLHQKDPAARKCFAIRELPMEEVKKPVKKKDVSKMDNKPERELEKTQDESIKDV 742
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 22 SN*YGIGKNSASSLMLTAYVVASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSR--LTF 195
SN Y NS S LT + A T + F+A T+ T SV+N++SS+ LT
Sbjct: 75 SNAYTSPTNSFGSAPLTTQINAFTQNPNGVNFYAELIFPDTTATPASVINALSSQGYLTN 134
Query: 196 VEVVSVGSATGLL 234
V S +GL+
Sbjct: 135 AFVSSTSQCSGLI 147
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 151 TLLSVVNSISSRLTF---VEVVSVGSATGLLLSSGCFCFSGKVI 273
T+ +V+N + + + V+SV TGL+L G FC +G I
Sbjct: 445 TVSNVINDLGGQAGLWLGLSVISVVEMTGLMLVMGAFCVTGGAI 488
>Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical
protein T05G5.12 protein.
Length = 92
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -1
Query: 362 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSR 183
S F Y K+++ D + ++ Y+K T P+ QK + S A T ST S
Sbjct: 5 SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSSS 64
Query: 182 EEMEFTTES 156
+ + +S
Sbjct: 65 KRYTSSQQS 73
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 260 LKQKQPEDSKRPVAEPTETTSTNVSRE 180
LK+K+P S +PV++P+ T V +E
Sbjct: 239 LKKKEPSTSVKPVSDPSPTKKVPVKKE 265
>U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical
protein D1009.3b protein.
Length = 463
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -1
Query: 218 EPTETTSTNVSREEMEF-TTESNVRDVDVGLETAQKTNEIAKAVEATT 78
E T T +T S+ ++ TTE V + + LE A + +EIA +EATT
Sbjct: 132 EDTTTITTTTSQTPDDYDTTEPFVEEEEYHLEEATEHHEIA-TIEATT 178
>U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical
protein D1009.3a protein.
Length = 465
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -1
Query: 218 EPTETTSTNVSREEMEF-TTESNVRDVDVGLETAQKTNEIAKAVEATT 78
E T T +T S+ ++ TTE V + + LE A + +EIA +EATT
Sbjct: 134 EDTTTITTTTSQTPDDYDTTEPFVEEEEYHLEEATEHHEIA-TIEATT 180
>AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical
protein K12B6.1 protein.
Length = 881
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +1
Query: 109 LVFWAVSKPTSTSRTLLSVVNSISSRLTFVEVVSVG---SATGLLLSSGCFCFSG--KVI 273
L+ A +KP + +VVNSI ++SVG S TGL+L FSG KV
Sbjct: 407 LIKLAAAKPHDRKKITDTVVNSIGLASEPKGIISVGAPESVTGLVLPKPDIYFSGGKKVF 466
Query: 274 FN 279
+N
Sbjct: 467 WN 468
>U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop helix
protein 27 protein.
Length = 321
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 166 VNSISSRLTFVEVVSVGSATGLLLSSGCFCFSGKVIFNTSFS*TQLPSEFTSQGRFCI 339
V + RLTF EV ++T LL+ C FN + +PS F++ RF +
Sbjct: 240 VKDLFPRLTFQEVQESPTSTSPLLTFPCIPMIPTTQFNVLSNYNTVPSIFSAPLRFIL 297
>U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop helix
protein 25 protein.
Length = 313
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +1
Query: 166 VNSISSRLTFVEVVSVGSATGLLLSSGCFCFSGKVIFNTSFS*TQLPSEFTSQGRFCI 339
V + RLTF EV ++T LL+ C FN + +PS F++ RF +
Sbjct: 232 VKDLFPRLTFQEVQESPTSTSPLLTFPCIPMIPTTQFNVLSNYNTVPSIFSAPLRFIL 289
>AL021469-3|CAA16290.2| 435|Caenorhabditis elegans Hypothetical
protein Y116A8B.5 protein.
Length = 435
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 121 AVSKPTSTSRTLLSVVNSISSRLTFVEVVSVGSATGLLL 237
AVS TSRT L +V +IS + F+ + +VG+ T +L+
Sbjct: 15 AVSNEDDTSRTTLKLVLAISYLVLFI-IGTVGNGTVILM 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,028,498
Number of Sequences: 27780
Number of extensions: 357620
Number of successful extensions: 1242
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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