Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d09f
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   1.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.5  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   1.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   4.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.9  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
          protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 43 ALVLCGLLAAVSAAPQYY 96
          A++LC  L AVSAA   Y
Sbjct: 6  AVILCAFLVAVSAAENKY 23


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 403 NLPWDVNSEGSWV 441
           N  WDV+S GSW+
Sbjct: 187 NAWWDVHSTGSWL 199



 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 481 QKQPEDSKRPVAEPTETTSTN 543
           Q  P  S  P + PT+ TST+
Sbjct: 72  QGAPSPSSTPSSLPTQRTSTS 92


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +1

Query: 199 EMQHLDNMMKELSLKFPSI-INEGRVEGD 282
           EM++L+ ++KE    +PS+ + E R+E D
Sbjct: 43  EMKYLEMVLKEAQRLYPSVPVIERRLEVD 71


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 37  MIALVLCGLLAAVSAAPQYYHGSSHWPYHHYD 132
           MI L+    + AVSAAP  ++ S    Y H D
Sbjct: 1   MIPLIAIAGILAVSAAPAEFYESR---YDHLD 29


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 490 PEDSKRPVAEPTETTSTNVSREEMEFTTESN 582
           PE    P  +PT+TT +  + +  E  TES+
Sbjct: 393 PEPVPTPEPQPTQTTESEPT-QASEQPTESS 422


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -2

Query: 143 GLKGS*W*YGQCDEPW*YCGAAETAASSPHNTKAIILVERST 18
           G  G  W Y   +    Y    E   ++P NT  I LV+ ST
Sbjct: 419 GTSGLAWLYLNNEGSLVYNVQIENLKTTPDNTTFITLVDVST 460


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.130    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,245
Number of Sequences: 336
Number of extensions: 2906
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)