Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d09f
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 33 0.16
U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450... 32 0.36
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.63
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.63
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.63
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 30 1.5
Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical p... 29 2.5
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 28 4.4
U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop heli... 28 5.9
U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop heli... 28 5.9
Z83112-4|CAN99694.1| 108|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z83112-3|CAB05540.1| 119|Caenorhabditis elegans Hypothetical pr... 27 7.7
AL132876-21|CAD21671.1| 418|Caenorhabditis elegans Hypothetical... 27 7.7
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 27 7.7
AF016687-3|AAC48090.1| 375|Caenorhabditis elegans Paralysed arr... 27 7.7
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 367 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAEPTETTSTN 543
+ + FN +LK NLP +EG + LK T P++ +K+ E S +PV + T+ N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368
Query: 544 VSREEMEFT 570
V ++ T
Sbjct: 369 VEDDDSSST 377
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 46 LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 135
L LC LLA SA YY S + PY++Y P
Sbjct: 5 LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34
>U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450
family protein 14A5 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 487 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 383
AF + G F R R P L HP G VFSS D
Sbjct: 82 AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 424 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 445 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 424 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 445 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 424 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 445 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 555
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 433 SWVY--EKD-VLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREEMEFTTESNVRDV 594
SW Y +KD + F +++ E+ K+PV + + N E+E T + +++DV
Sbjct: 686 SWFYLHQKDPAARKCFAIRELPMEEVKKPVKKKDVSKMDNKPERELEKTQDESIKDV 742
>Z72517-5|CAA96693.1| 545|Caenorhabditis elegans Hypothetical
protein T28F4.2 protein.
Length = 545
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 584 TLLSVVNSISSRLTF---VEVVSVGSATGLLLSSGCFCFSGKVI 462
T+ +V+N + + + V+SV TGL+L G FC +G I
Sbjct: 445 TVSNVINDLGGQAGLWLGLSVISVVEMTGLMLVMGAFCVTGGAI 488
>Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical
protein T05G5.12 protein.
Length = 92
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 373 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSR 552
S F Y K+++ D + ++ Y+K T P+ QK + S A T ST S
Sbjct: 5 SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSSS 64
Query: 553 EEMEFTTES 579
+ + +S
Sbjct: 65 KRYTSSQQS 73
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 475 LKQKQPEDSKRPVAEPTETTSTNVSRE 555
LK+K+P S +PV++P+ T V +E
Sbjct: 239 LKKKEPSTSVKPVSDPSPTKKVPVKKE 265
>AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical
protein F52G3.5 protein.
Length = 386
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 478 KQKQPEDSKRPVAEPTETTSTNVSREEMEFTTESNVRDVD 597
+ K+P+ +K T T + + EE TTE +V D++
Sbjct: 215 RSKRPKTTKTTTTSTTTTEAPTTTTEEYTTTTEEDVTDLE 254
>U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop helix
protein 27 protein.
Length = 321
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -2
Query: 569 VNSISSRLTFVEVVSVGSATGLLLSSGCFCFSGKVIFNTSFS*TQLPSEFTSQGRFCI 396
V + RLTF EV ++T LL+ C FN + +PS F++ RF +
Sbjct: 240 VKDLFPRLTFQEVQESPTSTSPLLTFPCIPMIPTTQFNVLSNYNTVPSIFSAPLRFIL 297
>U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop helix
protein 25 protein.
Length = 313
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -2
Query: 569 VNSISSRLTFVEVVSVGSATGLLLSSGCFCFSGKVIFNTSFS*TQLPSEFTSQGRFCI 396
V + RLTF EV ++T LL+ C FN + +PS F++ RF +
Sbjct: 232 VKDLFPRLTFQEVQESPTSTSPLLTFPCIPMIPTTQFNVLSNYNTVPSIFSAPLRFIL 289
>Z83112-4|CAN99694.1| 108|Caenorhabditis elegans Hypothetical
protein K02B7.3b protein.
Length = 108
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +1
Query: 379 FNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREE 558
FN Y + P + WV EK F ++ PE K+ T +TN +EE
Sbjct: 42 FNEYKEKLQDPETHKNIREWVAEKYEAASEFTKEEIVPE-LKKVYEAATADVTTNEPKEE 100
Query: 559 MEFTTESN 582
E T + N
Sbjct: 101 KEVTLDDN 108
>Z83112-3|CAB05540.1| 119|Caenorhabditis elegans Hypothetical
protein K02B7.3a protein.
Length = 119
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +1
Query: 379 FNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSREE 558
FN Y + P + WV EK F ++ PE K+ T +TN +EE
Sbjct: 53 FNEYKEKLQDPETHKNIREWVAEKYEAASEFTKEEIVPE-LKKVYEAATADVTTNEPKEE 111
Query: 559 MEFTTESN 582
E T + N
Sbjct: 112 KEVTLDDN 119
>AL132876-21|CAD21671.1| 418|Caenorhabditis elegans Hypothetical
protein Y105E8A.25 protein.
Length = 418
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 64 LAAVSAAPQYYHGSSHWPYHHYDPFSPYV 150
L A+S ++ S H PY+HY P S V
Sbjct: 181 LPAISEESEHEQQSIHIPYNHYPPHSSSV 209
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = +1
Query: 91 YYHGSSHWPY---HHYDPFSPYVR 153
YYHG W + HHY PF VR
Sbjct: 532 YYHGCVSWSWFYPHHYAPFISDVR 555
>AF016687-3|AAC48090.1| 375|Caenorhabditis elegans Paralysed arrest
at two-fold protein6 protein.
Length = 375
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 237 VEVPQHYKRRTRGRRQVSDIYSPAWLRTERHQRESEKWSAD 359
+EVP+ + G+RQ I R RE EKWSAD
Sbjct: 145 IEVPE-VSQSEEGQRQKLQIVVQTANRILGQPREQEKWSAD 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.130 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,899,743
Number of Sequences: 27780
Number of extensions: 284577
Number of successful extensions: 711
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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