Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d08r
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical pr...   232   2e-61
AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical ...   171   5e-43
Z50795-2|CAA90663.1|  618|Caenorhabditis elegans Hypothetical pr...   168   4e-42
U64835-6|AAG24199.1|  341|Caenorhabditis elegans Serpentine rece...    31   0.68 
Z75550-2|CAA99928.2|  421|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AF039053-18|AAC25881.2|  495|Caenorhabditis elegans Cytochrome p...    29   4.8  
AF036704-2|ABA00183.1|  281|Caenorhabditis elegans Hypothetical ...    29   4.8  
U40945-2|AAA81720.1|  445|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical
           protein T13H5.8 protein.
          Length = 566

 Score =  232 bits (567), Expect = 2e-61
 Identities = 102/132 (77%), Positives = 116/132 (87%)
 Frame = -3

Query: 650 EKTTAQADAEAMRYLSMLLYPLCVAGAIYSLVYEPHKSWYSWALHSIVNGVYAFGFLFML 471
           E  T   D++AM+YLS+LL PL + GAIYSL+Y PHKSW SW L +  NGVYAFGFLFML
Sbjct: 391 EDETDSIDSQAMKYLSILLVPLVIGGAIYSLLYVPHKSWRSWILETSANGVYAFGFLFML 450

Query: 470 PQLFVNYRLRSVAALPWRAFMYKAFNTFIDDVFAFIITMPTAHRMACFRDDLVFLVYLYQ 291
           PQLFVNY+L+SVA LPWRAFMYKAFNTFIDD+FAF+ITMPTAHRMACFRDD+VFLVYLYQ
Sbjct: 451 PQLFVNYKLKSVAHLPWRAFMYKAFNTFIDDLFAFVITMPTAHRMACFRDDIVFLVYLYQ 510

Query: 290 RWLYPVDKTRVD 255
           RWLYPVD TR++
Sbjct: 511 RWLYPVDYTRIN 522


>AC006615-4|AAK68233.2|  602|Caenorhabditis elegans Hypothetical
           protein C36B7.6 protein.
          Length = 602

 Score =  171 bits (416), Expect = 5e-43
 Identities = 72/132 (54%), Positives = 95/132 (71%)
 Frame = -3

Query: 650 EKTTAQADAEAMRYLSMLLYPLCVAGAIYSLVYEPHKSWYSWALHSIVNGVYAFGFLFML 471
           E  T   D  A RYLS +L+PL V  A+YS++Y   + WYSW L+ +   +  FGF+ M 
Sbjct: 435 ESDTKVYDQMAFRYLSWVLFPLLVGYAVYSIIYVEQRGWYSWVLNMLYGYLLMFGFITMT 494

Query: 470 PQLFVNYRLRSVAALPWRAFMYKAFNTFIDDVFAFIITMPTAHRMACFRDDLVFLVYLYQ 291
           PQLF+NY+L+SVA LPWR   YK  NTFIDD+FAF+I MP  +R+ CFRDD++FL+YLYQ
Sbjct: 495 PQLFINYKLKSVAHLPWRMLTYKFINTFIDDLFAFVIKMPLLYRIGCFRDDIIFLIYLYQ 554

Query: 290 RWLYPVDKTRVD 255
           RW+Y VD TR++
Sbjct: 555 RWIYRVDPTRMN 566


>Z50795-2|CAA90663.1|  618|Caenorhabditis elegans Hypothetical
           protein R166.2 protein.
          Length = 618

 Score =  168 bits (408), Expect = 4e-42
 Identities = 73/139 (52%), Positives = 96/139 (69%), Gaps = 1/139 (0%)
 Frame = -3

Query: 650 EKTTAQADAEAMRYLSMLLYPLCVAGAIYSLVYEPHKSWYSWALHSIVNGVYAFGFLFML 471
           E  T   D  A +YL   L+PL V  AIYS++Y   K WYSW L+ +   +  FGF+ M 
Sbjct: 440 ESETKIYDQMAFKYLGWALFPLLVGYAIYSVIYVEQKGWYSWVLNMLYGFLLTFGFITMT 499

Query: 470 PQLFVNYRLRSVAALPWRAFMYKAFNTFIDDVFAFIITMPTAHRMACFRDDLVFLVYLYQ 291
           PQLF+NY+L+SVA LPWR   YK  NTFIDD+FAF+I MP  +R+ CFRDD++FL+YLYQ
Sbjct: 500 PQLFINYKLKSVAHLPWRMLTYKFINTFIDDLFAFVIRMPLLYRIGCFRDDIIFLIYLYQ 559

Query: 290 RWLYPVDKTRV-DTGASMD 237
           RW Y +D TR+ + G S++
Sbjct: 560 RWAYRIDPTRLNEFGTSLE 578


>U64835-6|AAG24199.1|  341|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 9 protein.
          Length = 341

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
 Frame = -3

Query: 617 MRYLSMLLYPL--CVAGAIYSLVY--EPHKSWYSWA--LHSIVNGVYAFGFLFMLPQLFV 456
           M + +  + PL   +A   Y L +   P   + SW+  LH  ++ +++     +L   + 
Sbjct: 58  MMFCAPRIIPLDYAMAHIFYGLCHFGHPFLCYASWSALLHLFIHSMWSL----LLSFAYR 113

Query: 455 NYRLRSVAALPWRAFMYKAFNTFIDDVFAFIITMPTA 345
           NY L S     W+ FM+  F  +I     FI+ M TA
Sbjct: 114 NYILSSAPPSTWKVFMFSVF-IYIPSFTQFIVLMFTA 149


>Z75550-2|CAA99928.2|  421|Caenorhabditis elegans Hypothetical
           protein T22C1.3 protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = -3

Query: 611 YLSMLLYPLCVAGAIYSLVYEPHKSWYSWALHSIVNGVYAFGFLFMLPQLFVN 453
           Y     Y + +AG I S V+     W+ W + S  N  + FG   +     +N
Sbjct: 336 YKKHFRYTILIAGTIVSTVFLMPVMWHMWIVSSSGNANFFFGTTIVYNVALIN 388


>AF039053-18|AAC25881.2|  495|Caenorhabditis elegans Cytochrome p450
           family protein 33C2 protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -3

Query: 482 LFMLPQLFVNYRLRSVAALPWRAFMYKA-FNTFIDDVFAFIITMPTAHRMACFRDDL 315
           LF  P +F+   +  +A L    FMY+  F  F D  FAF      AHR     +DL
Sbjct: 206 LFGKPHMFLAMNIPVIAKL-MPEFMYEGPFKDFRDTAFAFFNKQIEAHRQEVDLNDL 261


>AF036704-2|ABA00183.1|  281|Caenorhabditis elegans Hypothetical
           protein ZK185.4 protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 537 LVLLGFTQHSEWSVCFRFSIHVAATVRELSASFCGSAAV 421
           L  +G  +H  W VCF +S  V A +  +S + C S ++
Sbjct: 140 LSAIGEKEHGIWHVCFFYSFGVVALLFFISNTVCHSQSL 178


>U40945-2|AAA81720.1|  445|Caenorhabditis elegans Hypothetical
           protein F10D7.2 protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -3

Query: 608 LSMLLYPLCVAGAIYSLVYEPHKSWYSWALHSIVNGVYAFGFLFMLPQ 465
           L  L+ P+   GA +S +      +   A+ SI+  +  FGFLF LP+
Sbjct: 176 LGFLIGPMI--GAYFSTIASIDSPFAYPAMFSIILTILEFGFLFFLPE 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,432,324
Number of Sequences: 27780
Number of extensions: 343517
Number of successful extensions: 754
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)