Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d08f
         (607 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025305-1|AAH25305.1|  538|Homo sapiens CLPTM1-like protein.          66   1e-10
AK027306-1|BAB55030.1|  538|Homo sapiens protein ( Homo sapiens ...    66   1e-10
AB045223-1|BAB20083.1|  512|Homo sapiens cisplatin resistance re...    48   3e-05
X91220-1|CAA62613.1| 1021|Homo sapiens NaCl electroneutral Thiaz...    30   7.3  
U44128-1|AAC50355.1| 1030|Homo sapiens thiazide-sensitive Na-Cl ...    30   7.3  
CR407685-1|CAG28613.1|  162|Homo sapiens CAV2 protein.                 29   9.6  
BT007051-1|AAP35700.1|  162|Homo sapiens caveolin 2 protein.           29   9.6  
BC005256-1|AAH05256.1|  162|Homo sapiens caveolin 2 protein.           29   9.6  
AJ133269-1|CAB63653.1|  162|Homo sapiens caveolin-2 protein.           29   9.6  
AF035752-1|AAB88492.1|  162|Homo sapiens caveolin-2 protein.           29   9.6  

>BC025305-1|AAH25305.1|  538|Homo sapiens CLPTM1-like protein.
          Length = 538

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
 Frame = +1

Query: 94  SVSLILTLIFVVYVINTIWTLAEIFIPPECRRGDKCFSSYLTSNPVQNLVFYASLKQQPL 273
           S + ++  +FVVYV++T W +  I     C     C   YL   P   L  Y + +    
Sbjct: 7   SFTSLVVGVFVVYVVHTCWVMYGIVYTRPCSGDANCIQPYLARRPKLQLSVYTTTRSHLG 66

Query: 274 EEGTSSNSVTKVHTLLNFDYRNPASINVQLNIPRKTRNNGTLYMHVVMLDDSKLYKSFDE 453
            E    N++  V  + +FD  +     V +++P+KTRNNGTLY ++ +     L   + +
Sbjct: 67  AE----NNIDLVLNVEDFDVESKFERTVNVSVPKKTRNNGTLYAYIFLHHAGVL--PWHD 120

Query: 454 IRQTHPLHTWPLIKFVEPQAATFNLLQ-HNDKEKI 555
            +Q H +   PL  ++ P+    NLL   +D ++I
Sbjct: 121 GKQVHLVS--PLTTYMVPKPEEINLLTGESDTQQI 153


>AK027306-1|BAB55030.1|  538|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14400 fis, clone HEMBA1003742, weakly similar to
           Homo sapiens cleft lip and palate transmembrane protein
           1 ).
          Length = 538

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
 Frame = +1

Query: 94  SVSLILTLIFVVYVINTIWTLAEIFIPPECRRGDKCFSSYLTSNPVQNLVFYASLKQQPL 273
           S + ++  +FVVYV++T W +  I     C     C   YL   P   L  Y + +    
Sbjct: 7   SFTSLVVGVFVVYVVHTCWVMYGIVYTRPCSGDANCIQPYLARRPKLQLSVYTTTRSHLG 66

Query: 274 EEGTSSNSVTKVHTLLNFDYRNPASINVQLNIPRKTRNNGTLYMHVVMLDDSKLYKSFDE 453
            E    N++  V  + +FD  +     V +++P+KTRNNGTLY ++ +     L   + +
Sbjct: 67  AE----NNIDLVLNVEDFDVESKFERTVNVSVPKKTRNNGTLYAYIFLHHAGVL--PWHD 120

Query: 454 IRQTHPLHTWPLIKFVEPQAATFNLLQ-HNDKEKI 555
            +Q H +   PL  ++ P+    NLL   +D ++I
Sbjct: 121 GKQVHLVS--PLTTYMVPKPEEINLLTGESDTQQI 153


>AB045223-1|BAB20083.1|  512|Homo sapiens cisplatin resistance
           related protein CRR9p protein.
          Length = 512

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
 Frame = +1

Query: 181 CRRGDKCFSSYLTSNPVQNLVFYASLKQQPLEEGTSSNSVTKVHTLLNFDYRNPASINVQ 360
           C     C   YL   P   L  Y + +     E    N++  V  + +FD  +     V 
Sbjct: 10  CSGDANCIQPYLARRPKLQLSVYTTTRSHLGAE----NNIDLVLNVEDFDVESKFERTVN 65

Query: 361 LNIPRKTRNNGTLYMHVVMLDDSKLYKSFDEIRQTHPLHTWPLIKFVEPQAATFNLLQ-H 537
           +++P+KTRNNGTLY ++ +     L   + + +Q H +   PL  ++ P+    NLL   
Sbjct: 66  VSVPKKTRNNGTLYAYIFLHHAGVL--PWHDGKQVHLVS--PLTTYMVPKPEEINLLTGE 121

Query: 538 NDKEKI 555
           +D ++I
Sbjct: 122 SDTQQI 127


>X91220-1|CAA62613.1| 1021|Homo sapiens NaCl electroneutral
           Thiazide-sensitive cotransporter protein.
          Length = 1021

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = +1

Query: 70  SLFGMKFVSVSLILTLIFVVYVINTIWTLAEIFIPPECRRGDKCFSSYLTSNPVQNLV 243
           SL GM++ S + +L   F+V +++    L    IPP   +  K F SY     VQNLV
Sbjct: 275 SLAGMEWESKAQVL--FFLVIMVSFANYLVGTLIPPSEDKASKGFFSYRADIFVQNLV 330


>U44128-1|AAC50355.1| 1030|Homo sapiens thiazide-sensitive Na-Cl
           protein.
          Length = 1030

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = +1

Query: 70  SLFGMKFVSVSLILTLIFVVYVINTIWTLAEIFIPPECRRGDKCFSSYLTSNPVQNLV 243
           SL GM++ S + +L   F+V +++    L    IPP   +  K F SY     VQNLV
Sbjct: 275 SLAGMEWESKAQVL--FFLVIMVSFANYLVGTLIPPSEDKASKGFFSYRADIFVQNLV 330


>CR407685-1|CAG28613.1|  162|Homo sapiens CAV2 protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 88  FVSVSLILTLIFVVYVINTIW-TLAEIFIPPECRRGDKCFSS 210
           ++ +  + T + V+  + TIW ++ ++ I P C    +CFSS
Sbjct: 113 WILMPFVKTCLMVLPSVQTIWKSVTDVIIAPLCTSVGRCFSS 154


>BT007051-1|AAP35700.1|  162|Homo sapiens caveolin 2 protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 88  FVSVSLILTLIFVVYVINTIW-TLAEIFIPPECRRGDKCFSS 210
           ++ +  + T + V+  + TIW ++ ++ I P C    +CFSS
Sbjct: 113 WILMPFVKTCLMVLPSVQTIWKSVTDVIIAPLCTSVGRCFSS 154


>BC005256-1|AAH05256.1|  162|Homo sapiens caveolin 2 protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 88  FVSVSLILTLIFVVYVINTIW-TLAEIFIPPECRRGDKCFSS 210
           ++ +  + T + V+  + TIW ++ ++ I P C    +CFSS
Sbjct: 113 WILMPFVKTCLMVLPSVQTIWKSVTDVIIAPLCTSVGRCFSS 154


>AJ133269-1|CAB63653.1|  162|Homo sapiens caveolin-2 protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 88  FVSVSLILTLIFVVYVINTIW-TLAEIFIPPECRRGDKCFSS 210
           ++ +  + T + V+  + TIW ++ ++ I P C    +CFSS
Sbjct: 113 WILMPFVKTCLMVLPSVQTIWKSVTDVIIAPLCTSVGRCFSS 154


>AF035752-1|AAB88492.1|  162|Homo sapiens caveolin-2 protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 88  FVSVSLILTLIFVVYVINTIW-TLAEIFIPPECRRGDKCFSS 210
           ++ +  + T + V+  + TIW ++ ++ I P C    +CFSS
Sbjct: 113 WILMPFVKTCLMVLPSVQTIWKSVTDVIIAPLCTSVGRCFSS 154


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,356,983
Number of Sequences: 237096
Number of extensions: 1856256
Number of successful extensions: 2956
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2954
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)