Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d04r
(798 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0503 - 3751028-3751063,3751145-3751231,3751333-3751410,375... 210 1e-54
09_04_0686 + 19457832-19457870,19458021-19458107,19459311-194593... 143 2e-34
08_02_1399 + 26771106-26771171,26772004-26772111,26772218-267722... 122 3e-28
03_05_0477 + 24707460-24707553,24707644-24707711,24707857-247079... 117 1e-26
12_02_1121 + 26233881-26234000,26234138-26234175,26235840-26236812 115 5e-26
05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141... 36 0.028
03_05_0521 + 25160245-25160883 36 0.037
07_01_0646 + 4853546-4853623,4853732-4855357,4855467-4855751,485... 34 0.15
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 32 0.61
01_06_0084 + 26286463-26288259 32 0.61
02_01_0057 + 420812-421556,422473-422597,422622-422912,423357-42... 31 0.80
09_04_0165 + 15274448-15277336 31 1.1
10_01_0015 - 187905-188432 31 1.4
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 30 2.5
10_08_0239 - 16099673-16100251 30 2.5
12_01_0874 + 8384332-8384657,8385447-8386044 29 3.2
09_02_0032 + 3142842-3143148,3143321-3143363,3144117-3144420 29 3.2
07_01_0479 + 3606663-3607448 29 3.2
07_01_0438 + 3328992-3329519 29 3.2
02_01_0302 - 2021221-2023305 29 3.2
02_01_0214 + 1420112-1420402 29 3.2
10_08_0550 + 18699187-18699272,18699298-18699544 29 4.3
07_03_1115 - 24076506-24076677,24077169-24077266,24077622-240777... 29 4.3
01_06_1094 - 34478538-34478624,34478860-34478931,34479154-344792... 29 4.3
08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497 29 5.7
05_01_0376 + 2943028-2943438 29 5.7
02_01_0216 + 1427490-1427789 29 5.7
11_06_0562 + 25003246-25003746,25004975-25005214,25005576-250060... 28 7.5
11_06_0038 - 19486260-19486341,19487141-19487289 28 7.5
09_02_0259 - 6385758-6386199,6387493-6387641 28 7.5
06_01_1031 - 8049493-8049747,8051719-8052561 28 7.5
05_07_0267 + 28818396-28818513,28819292-28819697,28819796-288199... 28 7.5
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 28 7.5
01_05_0265 + 20188160-20188211,20188291-20189019,20189103-201892... 28 7.5
12_02_1012 - 25281820-25281987,25282337-25282409,25283370-252834... 28 9.9
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 28 9.9
09_02_0456 - 9525067-9525422,9525679-9528226 28 9.9
07_03_1293 - 25563431-25563545,25564078-25564196,25564300-255644... 28 9.9
05_02_0156 + 7163756-7163834,7165447-7166225 28 9.9
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 28 9.9
03_02_0760 + 10960381-10960461,10960740-10961003,10961334-109616... 28 9.9
02_05_0121 + 26015578-26015613,26015734-26016066,26016184-26016978 28 9.9
>07_01_0503 -
3751028-3751063,3751145-3751231,3751333-3751410,
3751488-3751583,3752124-3752210,3752289-3752357,
3752511-3752600,3752601-3752720,3752907-3753004,
3753084-3753193,3753463-3753533,3753679-3753714,
3753862-3753973,3754495-3754700
Length = 431
Score = 210 bits (512), Expect = 1e-54
Identities = 99/173 (57%), Positives = 128/173 (73%), Gaps = 1/173 (0%)
Frame = -1
Query: 549 AKGLLLACIRERDPCVFLEPKILYRSAAEEVPVEDYTLPLGKAQTLRVGAAATLVGWGTQ 370
AKGLLLA IR+ +P VF EPK LYR A EEVP EDY LPL +A+ +R G+ TL+GWG Q
Sbjct: 261 AKGLLLASIRDPNPVVFFEPKWLYRLAVEEVPEEDYMLPLSEAEVIRKGSDITLIGWGAQ 320
Query: 369 VHVLLEVA-DMARDKLGVSCDVIDLQSILPWDEETVCNSVKKTGRCLISHEAPLTSGFGA 193
+ VL E D A+D G+SC++IDL++++PWD+ETV SV KTG+ L+SHEAP+T GFGA
Sbjct: 321 LAVLEEACEDAAKD--GISCELIDLRTLIPWDKETVEASVSKTGKLLVSHEAPITGGFGA 378
Query: 192 ELAATVQEECFLHLEAPIARVTGWDAPFPHVFEPFYLPDKWRCYQALIQLINY 34
E+AA++ E CF LEAP+ARV G D PFP V+E FY+P K + A+ +NY
Sbjct: 379 EIAASITERCFQRLEAPVARVCGLDTPFPLVYETFYMPTKNKVLDAIKATVNY 431
Score = 93.5 bits (222), Expect = 2e-19
Identities = 52/88 (59%), Positives = 56/88 (63%), Gaps = 21/88 (23%)
Frame = -1
Query: 792 GATAIAEIXFADYIFPAFDQ---------------------IVNEAAKARYRSGGEYDSG 676
G AIAEI FADYIFPAFDQ IVNEAAK RYRSG E++ G
Sbjct: 119 GNRAIAEIQFADYIFPAFDQACLRLDQCFVPTYLYIQLLVQIVNEAAKFRYRSGNEFNCG 178
Query: 675 ALTVRAPCSAVGHGGLYHSQSPEAFFAH 592
LT+R+P AVGHGG YHSQSPEAFF H
Sbjct: 179 GLTIRSPYGAVGHGGHYHSQSPEAFFCH 206
>09_04_0686 +
19457832-19457870,19458021-19458107,19459311-19459391,
19459463-19459489,19459589-19459651,19459768-19459854,
19460290-19460415,19460827-19460960,19461037-19461109,
19461307-19461372,19461778-19461816,19461927-19462051,
19462131-19462245,19463109-19463141,19463525-19463593
Length = 387
Score = 143 bits (346), Expect = 2e-34
Identities = 85/233 (36%), Positives = 122/233 (52%), Gaps = 3/233 (1%)
Frame = -1
Query: 792 GATAIAEIXFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSAVGHGGLYHSQS 613
G + E ++ A D I+N AAK+ Y S G+ S + R P A G HSQ
Sbjct: 113 GLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQI-SVPIVFRGPNGAAAGVGAQHSQC 171
Query: 612 PEAFFAHXXXXXXXXXXXPIAAKGLLLACIRERDPCVFLEPKILYRSA---AEEVPVEDY 442
A++AH A+GLL A IR+ DP VFLE ++LY + + EV +
Sbjct: 172 YAAWYAHVPGLKVLVPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISAEVLDSSF 231
Query: 441 TLPLGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVSCDVIDLQSILPWDEETVC 262
LP+GKA+ R G T+ + V L+ AD+ K G+S +VI+L+SI P D T+
Sbjct: 232 ALPIGKAKIEREGKDVTITAYSKMVGYALQAADIL-SKEGISAEVINLRSIRPLDRATIN 290
Query: 261 NSVKKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAPIARVTGWDAPFPH 103
SV+KT R + E+ G GAE+ +V EE F +L+AP+ R+ G D P P+
Sbjct: 291 ASVRKTNRLVTIEESFPQHGIGAEICMSVVEESFEYLDAPVERIAGADVPMPY 343
>08_02_1399 +
26771106-26771171,26772004-26772111,26772218-26772280,
26772382-26772468,26772931-26773056,26773418-26773551,
26773627-26773699,26773819-26773884,26774358-26774391,
26774904-26774953,26775067-26775191,26775278-26775392,
26775617-26775685
Length = 371
Score = 122 bits (294), Expect = 3e-28
Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Frame = -1
Query: 792 GATAIAEIXFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSAVGHGGLYHSQS 613
G + E ++ A D I+N AAK+ Y S G+ + + R P A G HSQ
Sbjct: 93 GLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINV-PIVFRGPNGAAAGVGAQHSQC 151
Query: 612 PEAFFAHXXXXXXXXXXXPIAAKGLLLACIRERDPCVFLEPKILYRSA---AEEVPVEDY 442
A++AH A+GLL A IR+ DP VFLE ++LY + + EV +
Sbjct: 152 YAAWYAHVPGLKVLTPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSF 211
Query: 441 TLPLGKAQTLRVGAAATLVGWGTQV-HVLLEVAD---MARD----------KLGVSCDVI 304
LP+GKA+ + G T+ + V + L +V + +D K G+S +VI
Sbjct: 212 CLPIGKAKIEQEGKDVTITAFSKMVGYALQDVREPQMKEKDVKFQAAEILSKEGISAEVI 271
Query: 303 DLQSILPWDEETVCNSVKKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAPIARVTG 124
+L+SI P D T+ SV+KT R + E G GAE+ +V E+ F +L+AP+ R+ G
Sbjct: 272 NLRSIRPLDRATINASVRKTNRLVTLEEGFPQHGVGAEICMSVVEDSFEYLDAPVERIAG 331
Query: 123 WDAPFPH 103
D P P+
Sbjct: 332 ADVPMPY 338
>03_05_0477 +
24707460-24707553,24707644-24707711,24707857-24707903,
24709188-24710160
Length = 393
Score = 117 bits (281), Expect = 1e-26
Identities = 72/230 (31%), Positives = 117/230 (50%)
Frame = -1
Query: 792 GATAIAEIXFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSAVGHGGLYHSQS 613
G + E ++ A++QI N Y SGG++ + +R P G HSQ
Sbjct: 143 GLRPVVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKI-PIVIRGPGGVGRQLGAEHSQR 201
Query: 612 PEAFFAHXXXXXXXXXXXPIAAKGLLLACIRERDPCVFLEPKILYRSAAEEVPVEDYTLP 433
E++F P AKGL+ A IR +P V E +LY + E++P E+Y L
Sbjct: 202 LESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLY-NLKEKIPDEEYVLC 260
Query: 432 LGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVSCDVIDLQSILPWDEETVCNSV 253
L +A+ +R G T++ + + +++ A +K G +VID++S+ P+D T+ NS+
Sbjct: 261 LEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDPEVIDIRSLKPFDLHTIGNSI 319
Query: 252 KKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAPIARVTGWDAPFPH 103
KKT R LI E T G GA L + + + + +L+API ++ D P P+
Sbjct: 320 KKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLSSQDVPTPY 369
>12_02_1121 + 26233881-26234000,26234138-26234175,26235840-26236812
Length = 376
Score = 115 bits (276), Expect = 5e-26
Identities = 72/230 (31%), Positives = 116/230 (50%)
Frame = -1
Query: 792 GATAIAEIXFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSAVGHGGLYHSQS 613
G I E ++ A++QI N Y SGG++ + +R P G HSQ
Sbjct: 126 GLRPIVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKI-PIVIRGPGGVGRQLGAEHSQR 184
Query: 612 PEAFFAHXXXXXXXXXXXPIAAKGLLLACIRERDPCVFLEPKILYRSAAEEVPVEDYTLP 433
E++F P AKGL+ A IR +P V E +LY + E++P E+Y
Sbjct: 185 LESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLY-NLKEKIPDEEYICC 243
Query: 432 LGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVSCDVIDLQSILPWDEETVCNSV 253
L +A+ +R G T++ + + +++ A +K G +VID++S+ P+D T+ NS+
Sbjct: 244 LEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDPEVIDIRSLKPFDLHTIGNSI 302
Query: 252 KKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAPIARVTGWDAPFPH 103
KKT R LI E T G GA L + + + + +L+API ++ D P P+
Sbjct: 303 KKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLSSQDVPTPY 352
>05_04_0284 -
19813179-19813340,19813464-19813748,19813850-19814131,
19814224-19814531,19814654-19814927,19815807-19816175,
19816372-19816434,19817495-19817789,19817818-19818008,
19818123-19818428,19818516-19818638
Length = 885
Score = 36.3 bits (80), Expect = 0.028
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = -1
Query: 438 LPLGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVSCDVIDLQSILPWDEETVCN 259
L +GK + L G L+G+G+ V L A + ++ G+ V D + P D +T+
Sbjct: 736 LEVGKGRVLLEGERVALLGYGSAVQYCLAAASLV-ERHGLKVTVADARFCKPLD-QTLIR 793
Query: 258 SVKKTGRCLISHEAPLTSGFGAELA 184
+ + L++ E GFG+ +A
Sbjct: 794 RLASSHEVLLTVEEGSIGGFGSHVA 818
>03_05_0521 + 25160245-25160883
Length = 212
Score = 35.9 bits (79), Expect = 0.037
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = -3
Query: 646 GRARRTLPLPESGGLLCTCP---RSPGGGAS-RAHSGQGSAAGLHPREGPLRVPGTEDTV 479
GR RR LP PE G R GGG+ + G G A L P EG V G +
Sbjct: 111 GRERRRLPEPEEGATTVAGAWEGRGNGGGSRIQGMGGGGGGASLEPEEGAAAVAGAREEG 170
Query: 478 PVGSRRST 455
+G + S+
Sbjct: 171 VLGRQWSS 178
>07_01_0646 +
4853546-4853623,4853732-4855357,4855467-4855751,
4856131-4856277
Length = 711
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = -1
Query: 438 LPLGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVSCDVIDLQSILPWDEETVCN 259
L +GK + L G L+G+GT V ++ A+ ++ G+ V D + P D +
Sbjct: 567 LEVGKGRVLVGGNRVALLGYGTMVQACMKAAEALKEH-GIYVTVADARFCKPLDTGLI-R 624
Query: 258 SVKKTGRCLISHEAPLTSGFGAELA 184
+ L++ E GFG+ +A
Sbjct: 625 ELAAEHEVLVTVEEGSIGGFGSHVA 649
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 31.9 bits (69), Expect = 0.61
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 583 SPGGGASRAHSGQGSAAGLHPREGPLRVPGTEDTVPVGSRR 461
+PGG A+ G AA + P R P T +TVP GS R
Sbjct: 86 APGGAATAQREGAPPAAATSVQGAP-RAPATAETVPQGSPR 125
>01_06_0084 + 26286463-26288259
Length = 598
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -1
Query: 483 LYRSAAEE-VPVEDYTLPLGKAQTLRVGAAATLVGWGTQVH 364
++R A EE VPV D+T+ LRV AAATL G QVH
Sbjct: 214 IFRLALEEAVPVNDFTVSC----ILRVCAAATLFELGAQVH 250
>02_01_0057 +
420812-421556,422473-422597,422622-422912,423357-423555,
423737-423800,423894-423957,424055-424135,424334-424420,
424492-424500
Length = 554
Score = 31.5 bits (68), Expect = 0.80
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 381 SPPAWPRRRLLTSAPFPAVACNPRRVLLRLPTGTVS 488
SP + RRR L P P VA P R+L+R+P S
Sbjct: 268 SPASRLRRRRLLPRPLPVVASVPLRLLVRIPDARCS 303
>09_04_0165 + 15274448-15277336
Length = 962
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 583 SPGGGASRAHSGQGSAAGLHPREGPLRVPGTEDTVPVGSRRSTRRGLHATAG 428
+PGGGA A G +AAG + GP + + +P+ + + R HA AG
Sbjct: 8 TPGGGAPEARRGSLAAAGSAVQHGPDLIGFSSWVLPISAGYAVDR-RHAAAG 58
>10_01_0015 - 187905-188432
Length = 175
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 724 RSCQSEVQIWRGVRQRRPHGPRALQCGRARR 632
R+ + + WRG R+RR G R +C R RR
Sbjct: 85 RTASTRSERWRGGRRRRSEGRRGGRCRRGRR 115
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -3
Query: 583 SPGGGASRAHSGQGSAAGLHPREGPLRVPGTEDTVPVGSRRSTRRGLHATAGKG 422
+PGG A+ G AA + P R P T TVP G S RR + A + G
Sbjct: 86 APGGAATAPRQGAPPAAATSVQGAP-RAPATAATVPQGG--SPRRTVPAQSAPG 136
>10_08_0239 - 16099673-16100251
Length = 192
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -3
Query: 562 RAHSGQGSAAGLHPREGPLRVPGTEDTVPVGSRRSTRRGLHATAGKG 422
R S QGS G G + G + + GS S R G HA+ G G
Sbjct: 27 RYSSSQGSGTGSGQGGGYVNGGGAGEGIGAGSGSSNRYGAHASGGGG 73
>12_01_0874 + 8384332-8384657,8385447-8386044
Length = 307
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 170 SCTVAASSAPNPDVSGASWDIKHR-PVFFTELHTVSSSQGRID 295
SC A+SAP + W + HR P+ + H S + G +D
Sbjct: 71 SCCYKAASAPEDSATKPPWAMPHRVPINDSTSHASSHNDGSVD 113
>09_02_0032 + 3142842-3143148,3143321-3143363,3144117-3144420
Length = 217
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 537 ADPWPLWA-REAPPPGDRGHVQRRPPDSGS 623
ADP+PL + R P PGD G QRR GS
Sbjct: 66 ADPYPLTSWRTDPAPGDWGWRQRRSTVEGS 95
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 471 PTGTVSSVPGTRRGPSRGCRPAADPWPLWAREAPPPGDRGHVQRRPP 611
P G PG GP G RP P P PPP + PP
Sbjct: 214 PMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQPGQNPP 260
>07_01_0438 + 3328992-3329519
Length = 175
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +3
Query: 474 TGTVSSVPGTRRGPSRGCRPAADPWPLWAREAPPPGDRGHVQRRPPDSGSG 626
+ T SS P + RGC A P PL AP R ++P SG G
Sbjct: 2 SSTSSSPPPPSKAKRRGCIHGARPQPLIVSSAPAEASR--PSKKPRVSGGG 50
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 561 REAPPPGDRGHVQRRPPDSGS 623
R APPPG G + PP SGS
Sbjct: 564 RFAPPPGSYGPIPSTPPSSGS 584
>02_01_0214 + 1420112-1420402
Length = 96
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3
Query: 577 GGGASRAHSGQGSAAGLHPREGPLRVPGTEDTVPVGSRRSTRRGLHATAGKGA 419
GG + AH G G+ AG G G + + VG+ + G AG GA
Sbjct: 20 GGAGASAHVGVGAGAGADAGVGAAVGAGADAALGVGANAAGAAGAGVGAGIGA 72
>10_08_0550 + 18699187-18699272,18699298-18699544
Length = 110
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 601 LCTC-PRSPGGGASR-AHSGQGSAAGLHPREGPLRVPG 494
LC PR G G R AH G G G R G R PG
Sbjct: 24 LCVAAPRREGRGRRRPAHRGAGELGGEQARPGQRRTPG 61
>07_03_1115 -
24076506-24076677,24077169-24077266,24077622-24077743,
24079059-24079235,24079809-24079897,24079919-24079965,
24080423-24080519,24080600-24080682,24080716-24080796,
24081043-24081199,24081323-24081750,24081985-24082014,
24083180-24083300,24083432-24083697
Length = 655
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
Frame = -1
Query: 684 DSGALTVRAPCSAVGHGGLYHSQSPEAFFAHXXXXXXXXXXXPIAAK-GLLLACIRERDP 508
DSG+ PC+ G + S+SP AH K + C ER
Sbjct: 109 DSGSTVTYVPCATCEQCGNHQSESPNIIEAHDPRFQPDLSSTYSPVKCNVDCTCDNERSQ 168
Query: 507 CVFLEPKILYRSAAEEVPVEDYTLPLGKAQTLR 409
C + E + S++ V ED + GK L+
Sbjct: 169 CTY-ERQYAEMSSSSGVLGED-IMSFGKESELK 199
>01_06_1094 -
34478538-34478624,34478860-34478931,34479154-34479222,
34479312-34479422,34480390-34480528,34480590-34480705,
34480821-34480968,34481058-34481215,34481654-34481827,
34482592-34483056
Length = 512
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = -3
Query: 703 QIWRGVRQRRPHGPRALQCGRARRTLPLPESGGLLCTCPRSPGGGASRAHSGQGSAA 533
Q+ + + R PR L A L L + L P SPGG AS + SG GSAA
Sbjct: 5 QLPSSLARARAASPRGLLAAAALLLLLLLAASYSLLLSPSSPGGLASPS-SGPGSAA 60
>08_01_1066 - 10887509-10888171,10888782-10888964,10889234-10889497
Length = 369
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 513 PSRGCRPA-ADPWPLWAREAPPPGDRGHVQRRP 608
P GC PA A W L + PPP R H+ P
Sbjct: 304 PVAGCSPAEAVLWALLNQGPPPPSMRNHINLLP 336
>05_01_0376 + 2943028-2943438
Length = 136
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 432 AVACNPRRVLLRLPTGTVSSVPGTRRGPS 518
A PRRV L +P T+ + R+GPS
Sbjct: 23 AAVAGPRRVKLPMPQATIGFILAWRKGPS 51
>02_01_0216 + 1427490-1427789
Length = 99
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3
Query: 577 GGGASRAHSGQGSAAGLHPREGPLRVPGTEDTVPVGSRRSTRRGLHATAGKGA 419
GG + AH G G+ AG G G + + VG+ + G AG GA
Sbjct: 23 GGAGASAHVGVGAGAGADAGVGAAVGAGADAALGVGAGAAGAAGAGVGAGIGA 75
>11_06_0562 +
25003246-25003746,25004975-25005214,25005576-25006097,
25006184-25007248,25007350-25007656,25007761-25008001,
25008104-25008302,25008771-25008852,25008959-25009209,
25010061-25010219,25010220-25010603
Length = 1316
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = -3
Query: 583 SPGGGASRAHSGQGSAAGLHPREGPLRVPGTEDTVPVGSRRSTRRGLHATAGKGA 419
+PGG + G AA + P T TVP GS R T A +G A
Sbjct: 85 APGGAETAQRQGAPPAAVTSVQGAPRAPASTAATVPQGSPRRTVAAQSAPSGAAA 139
>11_06_0038 - 19486260-19486341,19487141-19487289
Length = 76
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = -3
Query: 679 RRPHGPRALQCGRARRTLPLPESGGLLCTCPRSPGGGASRAHSGQGSAAG---LHPREGP 509
R P P L GRA T GG ++ GGG+ + +G G L PRE P
Sbjct: 6 RAPQTPTELGRGRATSTDGSKRQGGGAARRRQASGGGSEGVRARRGLVLGSRQLQPREMP 65
>09_02_0259 - 6385758-6386199,6387493-6387641
Length = 196
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -3
Query: 628 LPLPESGGLLCTCPRSPGGGASRAHSGQGSAAGLHPREGPLRVPGT 491
+PL G L + PR+ GG R G+G AA LHP L PGT
Sbjct: 1 MPLRRGGALPLSAPRAAAGGL-RGGGGRG-AALLHPT--CLSPPGT 42
>06_01_1031 - 8049493-8049747,8051719-8052561
Length = 365
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 324 GVSCDVIDLQSILPWDEETVCNSVKKTGRC-LISHEAPLTSGFGAELAATVQ 172
GVS V++L P E + + G L++H A + SGF A L A V+
Sbjct: 57 GVSIPVVNLSLPAPLAAEAAAGAARDWGFFYLVNHHALVPSGFTAGLLAAVR 108
>05_07_0267 +
28818396-28818513,28819292-28819697,28819796-28819973,
28820414-28820553,28820629-28821874,28821952-28822052,
28822170-28822314,28822755-28822823,28822910-28822955,
28823049-28823422,28823622-28823701,28823813-28823948,
28824199-28824358,28824582-28824664,28825417-28825545
Length = 1136
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +2
Query: 140 IGASKCRKHSSCTVAASSAPNPDVSGASWDIKHRPVFFTELH 265
+GAS K S A S D +G SW IK R F ELH
Sbjct: 698 VGASIV-KSGSGMFAVYSVSVTDANGNSWSIKRRFRHFEELH 738
>01_06_1123 +
34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/76 (31%), Positives = 30/76 (39%)
Frame = +3
Query: 381 SPPAWPRRRLLTSAPFPAVACNPRRVLLRLPTGTVSSVPGTRRGPSRGCRPAADPWPLWA 560
SPPA RR LL S+P P L L T + S+ G S P+P W+
Sbjct: 32 SPPA-SRRHLLLSSPAP---------LRTLSTASASAAAGGASSDSYSSGSCHSPFPEWS 81
Query: 561 REAPPPGDRGHVQRRP 608
R G+ R P
Sbjct: 82 RLVDRLSAAGYGARAP 97
>01_05_0265 +
20188160-20188211,20188291-20189019,20189103-20189231,
20189857-20189938,20190034-20190166,20190269-20190340,
20190478-20190573,20190651-20190764,20190838-20191050,
20191144-20191242,20191328-20191488,20191589-20191685,
20191828-20191989,20192068-20192148,20192242-20192320,
20192414-20192550,20192638-20192688,20192776-20192844,
20193583-20193700,20194142-20194197
Length = 909
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +3
Query: 417 SAPFPAVACNPRRVLLRLPTGTVSSVPGTRRGPSRGCRPAADPWP----LWAREAPPPGD 584
++P P+V+ R LP S RRG R R +A P+P L E PP
Sbjct: 13 NSPPPSVSSPDVRPSSPLPATNSSPPQSGRRGGGRRRRGSASPYPSSPSLGGFETPP--- 69
Query: 585 RGHVQRRPPDSGS 623
H RR P G+
Sbjct: 70 --HPGRRTPSGGA 80
>12_02_1012 -
25281820-25281987,25282337-25282409,25283370-25283420,
25283523-25283932,25284083-25284413,25285340-25285439,
25287091-25287370
Length = 470
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 483 VSSVPGTRRGPSRGCRPAADP 545
V++VP R+GP RG +PA P
Sbjct: 325 VATVPFKRKGPGRGRKPAQPP 345
>11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -3
Query: 715 QSEV--QIWRG-VRQRRPHGPRALQCGRARRTLPLPESGGLLCTCPRSPGGGASRAHSGQ 545
+SEV ++W G V QRR C R LPLP+ C S GG AS G+
Sbjct: 935 ESEVDSEVWLGWVAQRRV-------CSRLETRLPLPKLNTSCCLVTLSRGGRASNLSRGR 987
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 85 VERFEDMREGRVPAGHSSYRRLQVQKTFLLHGGGEL 192
+E F + GR+PAG ++LQ + H GE+
Sbjct: 255 IELFSNQLSGRIPAGLGGLKKLQQLDISMNHISGEI 290
>07_03_1293 -
25563431-25563545,25564078-25564196,25564300-25564467,
25564565-25564627,25564709-25564816,25565125-25565237,
25565313-25565609,25565724-25565802,25566116-25566224,
25566324-25566365,25567023-25567153,25568100-25568648
Length = 630
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +3
Query: 420 APFPAVACNPRRVLLRLPTGTVSSVPGTRRGPSRGCRPAADPWPLWAREAPPPGDRG 590
+P P+ P R LLRLP S R+ +R P P P + G RG
Sbjct: 74 SPAPSAPTTPARRLLRLPFPPPSPAKHIRQALARRHGPPRPPIPEEGGDVEGEGGRG 130
>05_02_0156 + 7163756-7163834,7165447-7166225
Length = 285
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -3
Query: 589 PRSPGGGASRAHSGQGSAAGLHPREGPLRVPGTEDTVPVGSRRSTRR 449
P PG + + G + PREGPL PG + P+ R RR
Sbjct: 59 PHQPGELSGVSFEGGHGGQRVLPREGPL--PGLQADAPLHPRHRRRR 103
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 381 SPPAWPRRRLLTSAPFPAVACNPRRVLLRLPTGTVSSVPGTRRGPSRGC 527
+PP R +L APF V C+ L++LPT GTRR C
Sbjct: 856 APPRHHCRPVLRGAPF--VVCSGCNRLVQLPTDFAVPSKGTRRLQCGSC 902
>03_02_0760 +
10960381-10960461,10960740-10961003,10961334-10961619,
10961637-10962394
Length = 462
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 613 SGGLLCTCPRSPGGGASRAHSGQGSAAGLHPREGPLRVPGT 491
+GG PG RA S G+A L P +G +PGT
Sbjct: 319 AGGGATGAAAVPGSACVRAASPGGTATFLEPTDGAAVLPGT 359
>02_05_0121 + 26015578-26015613,26015734-26016066,26016184-26016978
Length = 387
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -3
Query: 661 RALQCGRARRTLP-LPESGGLLCTCPRSPGGGASRAHSGQGSAAGLHPREGP-LRVPGTE 488
R + A LP LP + L C + R H G SA L P P + TE
Sbjct: 135 RIMDDSLAELPLPQLPAAAAALAACGKPQH---RRPHEGAASAL-LDPMRTPTICALSTE 190
Query: 487 DTVPVGSRRSTR 452
VPV SRRS R
Sbjct: 191 ALVPVKSRRSKR 202
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,204,929
Number of Sequences: 37544
Number of extensions: 575141
Number of successful extensions: 2846
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2823
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -