Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d04r
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79695-1|CAB01970.1|  366|Caenorhabditis elegans Hypothetical pr...   345   3e-95
AF038606-5|AAB92024.2|  352|Caenorhabditis elegans Hypothetical ...   137   1e-32
Z72514-2|CAA96675.2|  422|Caenorhabditis elegans Hypothetical pr...    31   1.3  
L11247-3|AAA28008.1|  278|Caenorhabditis elegans Collagen protei...    30   2.2  
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p...    29   2.9  
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical...    29   2.9  
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical...    29   2.9  
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ...    29   2.9  
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ...    29   2.9  
AF047659-10|AAC04430.1|  798|Caenorhabditis elegans Hypothetical...    29   3.9  
Z22180-10|CAO82052.1|  360|Caenorhabditis elegans Hypothetical p...    29   5.1  
Z22180-9|CAO82051.1|  304|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z22180-2|CAD54146.1|  392|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z22180-1|CAA80176.2|  371|Caenorhabditis elegans Hypothetical pr...    29   5.1  

>Z79695-1|CAB01970.1|  366|Caenorhabditis elegans Hypothetical
           protein F27D4.5 protein.
          Length = 366

 Score =  345 bits (847), Expect = 3e-95
 Identities = 158/254 (62%), Positives = 195/254 (76%)
 Frame = -1

Query: 795 AGATAIAEIXFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSAVGHGGLYHSQ 616
           AGATAIAEI F DYIFPA+DQ+VNEAAK RYRSG ++D G LTVR    AVGHG LYHSQ
Sbjct: 113 AGATAIAEIQFGDYIFPAYDQLVNEAAKFRYRSGNQFDCGKLTVRTTWGAVGHGALYHSQ 172

Query: 615 SPEAFFAHXXXXXXXXXXXPIAAKGLLLACIRERDPCVFLEPKILYRSAAEEVPVEDYTL 436
           SPEA F H           P+ AKGLLL+CIR+ +PC+F EPKILYR A+E+VP  DYT+
Sbjct: 173 SPEANFTHTPGLKLVVPRGPVQAKGLLLSCIRDPNPCIFFEPKILYRLASEDVPTGDYTI 232

Query: 435 PLGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVSCDVIDLQSILPWDEETVCNS 256
           PLG+A+T+R G   TLV WGTQVHV LE A +A++KL    +VIDLQ+I PWDE+ V  S
Sbjct: 233 PLGQAETVRSGKDLTLVAWGTQVHVALEAAQLAKEKLNADVEVIDLQTIQPWDEDHVVES 292

Query: 255 VKKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAPIARVTGWDAPFPHVFEPFYLPD 76
           V+KTGR +++HEAP++SGFGAE+A+TVQ+ CFL+LE+PI RV G+D PFPHV EPFYLP 
Sbjct: 293 VQKTGRLIVTHEAPISSGFGAEIASTVQKRCFLNLESPIDRVAGFDTPFPHVHEPFYLPT 352

Query: 75  KWRCYQALIQLINY 34
             R + A+ + +NY
Sbjct: 353 VHRVFDAIKKSVNY 366


>AF038606-5|AAB92024.2|  352|Caenorhabditis elegans Hypothetical
           protein C04C3.3 protein.
          Length = 352

 Score =  137 bits (331), Expect = 1e-32
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 6/259 (2%)
 Frame = -1

Query: 795 AGATAIAEIXFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSAVGHGGLYHSQ 616
           AG   I E    ++   A DQI+N AAK  Y S G      +  R P  A       HSQ
Sbjct: 94  AGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPV-PIVFRGPNGAAAGVAAQHSQ 152

Query: 615 SPEAFFAHXXXXXXXXXXXPIAAKGLLLACIRERDPCVFLEPKILYRSA---AEEVPVED 445
              A++AH              AKGLL A IR+ +P VFLE +ILY  +    +EV  +D
Sbjct: 153 DFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEILYGQSFPVGDEVLSDD 212

Query: 444 YTLPLGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVSCDVIDLQSILPWDEETV 265
           + +P+GKA+  R G   T+V +   V   LE A    + +GVS +VI+L+S+ P+D E++
Sbjct: 213 FVVPIGKAKIERAGDHVTIVSYSRGVEFSLEAAKQL-EAIGVSAEVINLRSLRPFDFESI 271

Query: 264 CNSVKKTGRCLISHEAPLTSGFGAELAATVQE-ECFLHLEAPIARVTGWDAPFPH--VFE 94
             SV KT   +        +G G+E+AA V E + F  L+AP+ RVTG D P P+    E
Sbjct: 272 RQSVHKTHHLVSVETGWPFAGIGSEIAAQVMESDVFDQLDAPLLRVTGVDVPMPYTQTLE 331

Query: 93  PFYLPDKWRCYQALIQLIN 37
              LP      +A+ + +N
Sbjct: 332 AAALPTAEHVVKAVKKSLN 350


>Z72514-2|CAA96675.2|  422|Caenorhabditis elegans Hypothetical
           protein T10B10.2 protein.
          Length = 422

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -1

Query: 744 AFDQIVNEAAKARYRSGGEYDSGALTVRAPCSAVG 640
           A+D +V++  KA YR+GG  +S    + APCS +G
Sbjct: 151 AYDLVVDQIHKAAYRNGGLGNS----IYAPCSKIG 181


>L11247-3|AAA28008.1|  278|Caenorhabditis elegans Collagen protein
           91 protein.
          Length = 278

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 664 PRALQCGRARRTLPLPESGGLLCTCPRSPGG 572
           P+ +  GRARR   LP+   L   CP  P G
Sbjct: 64  PKEMLLGRARRQAALPDCQALAKNCPPGPPG 94


>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
            protein JC8.10b protein.
          Length = 1119

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/75 (29%), Positives = 30/75 (40%)
 Frame = +3

Query: 384  PPAWPRRRLLTSAPFPAVACNPRRVLLRLPTGTVSSVPGTRRGPSRGCRPAADPWPLWAR 563
            PP  P +     +P  A   NP       P    S++P     P+RG      P  +  R
Sbjct: 1045 PPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIP---LPPTRGASVGPGPPAVPVR 1101

Query: 564  EAPPPGDRGHVQRRP 608
            +APPP  R  +  RP
Sbjct: 1102 KAPPPPPRPVIPPRP 1116


>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
            protein JC8.10a protein.
          Length = 1113

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/75 (29%), Positives = 30/75 (40%)
 Frame = +3

Query: 384  PPAWPRRRLLTSAPFPAVACNPRRVLLRLPTGTVSSVPGTRRGPSRGCRPAADPWPLWAR 563
            PP  P +     +P  A   NP       P    S++P     P+RG      P  +  R
Sbjct: 1039 PPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIP---LPPTRGASVGPGPPAVPVR 1095

Query: 564  EAPPPGDRGHVQRRP 608
            +APPP  R  +  RP
Sbjct: 1096 KAPPPPPRPVIPPRP 1110


>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
            protein JC8.10b protein.
          Length = 1119

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/75 (29%), Positives = 30/75 (40%)
 Frame = +3

Query: 384  PPAWPRRRLLTSAPFPAVACNPRRVLLRLPTGTVSSVPGTRRGPSRGCRPAADPWPLWAR 563
            PP  P +     +P  A   NP       P    S++P     P+RG      P  +  R
Sbjct: 1045 PPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIP---LPPTRGASVGPGPPAVPVR 1101

Query: 564  EAPPPGDRGHVQRRP 608
            +APPP  R  +  RP
Sbjct: 1102 KAPPPPPRPVIPPRP 1116


>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
            protein JC8.10a protein.
          Length = 1113

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/75 (29%), Positives = 30/75 (40%)
 Frame = +3

Query: 384  PPAWPRRRLLTSAPFPAVACNPRRVLLRLPTGTVSSVPGTRRGPSRGCRPAADPWPLWAR 563
            PP  P +     +P  A   NP       P    S++P     P+RG      P  +  R
Sbjct: 1039 PPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIP---LPPTRGASVGPGPPAVPVR 1095

Query: 564  EAPPPGDRGHVQRRP 608
            +APPP  R  +  RP
Sbjct: 1096 KAPPPPPRPVIPPRP 1110


>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
            UNC-26B protein.
          Length = 1113

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/75 (29%), Positives = 30/75 (40%)
 Frame = +3

Query: 384  PPAWPRRRLLTSAPFPAVACNPRRVLLRLPTGTVSSVPGTRRGPSRGCRPAADPWPLWAR 563
            PP  P +     +P  A   NP       P    S++P     P+RG      P  +  R
Sbjct: 1039 PPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIP---LPPTRGASVGPGPPAVPVR 1095

Query: 564  EAPPPGDRGHVQRRP 608
            +APPP  R  +  RP
Sbjct: 1096 KAPPPPPRPVIPPRP 1110


>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
            UNC-26A protein.
          Length = 1119

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 22/75 (29%), Positives = 30/75 (40%)
 Frame = +3

Query: 384  PPAWPRRRLLTSAPFPAVACNPRRVLLRLPTGTVSSVPGTRRGPSRGCRPAADPWPLWAR 563
            PP  P +     +P  A   NP       P    S++P     P+RG      P  +  R
Sbjct: 1045 PPLAPPQSNNNKSPPQACLFNPFTQSAPSPAPPPSTIP---LPPTRGASVGPGPPAVPVR 1101

Query: 564  EAPPPGDRGHVQRRP 608
            +APPP  R  +  RP
Sbjct: 1102 KAPPPPPRPVIPPRP 1116


>AF047659-10|AAC04430.1|  798|Caenorhabditis elegans Hypothetical
           protein K07H8.10 protein.
          Length = 798

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = -3

Query: 589 PRSPGGGASRAHSGQGSAAGLHPREGPLRVPGTEDTVPVGSRRSTRRGLHATAGKGAD 416
           PR  GGG  R   G+G  +G  PR G     G +     G  R   RG  ++  +G D
Sbjct: 6   PRGRGGGGFR--GGRGGGSGFTPRGGGGGFRGGDRGRSPGGFRGGDRGRSSSGFRGGD 61


>Z22180-10|CAO82052.1|  360|Caenorhabditis elegans Hypothetical
           protein K11H3.1d protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = -1

Query: 318 SCDVIDL-QSILPWDEETVCNSVKKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAP 142
           SC + DL  +        VC +  KTG+ +   E  L +G  A+   T  EE +L +   
Sbjct: 266 SCGIADLITTCYGGRNRKVCEAFVKTGKSMAEVEKELLNGQSAQGPLTA-EEVYLMMHK- 323

Query: 141 IARVTGWDAPFP 106
               TG DA FP
Sbjct: 324 ----TGLDAKFP 331


>Z22180-9|CAO82051.1|  304|Caenorhabditis elegans Hypothetical
           protein K11H3.1c protein.
          Length = 304

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = -1

Query: 318 SCDVIDL-QSILPWDEETVCNSVKKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAP 142
           SC + DL  +        VC +  KTG+ +   E  L +G  A+   T  EE +L +   
Sbjct: 210 SCGIADLITTCYGGRNRKVCEAFVKTGKSMAEVEKELLNGQSAQGPLTA-EEVYLMMHK- 267

Query: 141 IARVTGWDAPFP 106
               TG DA FP
Sbjct: 268 ----TGLDAKFP 275


>Z22180-2|CAD54146.1|  392|Caenorhabditis elegans Hypothetical
           protein K11H3.1b protein.
          Length = 392

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = -1

Query: 318 SCDVIDL-QSILPWDEETVCNSVKKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAP 142
           SC + DL  +        VC +  KTG+ +   E  L +G  A+   T  EE +L +   
Sbjct: 298 SCGIADLITTCYGGRNRKVCEAFVKTGKSMAEVEKELLNGQSAQGPLTA-EEVYLMMHK- 355

Query: 141 IARVTGWDAPFP 106
               TG DA FP
Sbjct: 356 ----TGLDAKFP 363


>Z22180-1|CAA80176.2|  371|Caenorhabditis elegans Hypothetical
           protein K11H3.1a protein.
          Length = 371

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = -1

Query: 318 SCDVIDL-QSILPWDEETVCNSVKKTGRCLISHEAPLTSGFGAELAATVQEECFLHLEAP 142
           SC + DL  +        VC +  KTG+ +   E  L +G  A+   T  EE +L +   
Sbjct: 277 SCGIADLITTCYGGRNRKVCEAFVKTGKSMAEVEKELLNGQSAQGPLTA-EEVYLMMHK- 334

Query: 141 IARVTGWDAPFP 106
               TG DA FP
Sbjct: 335 ----TGLDAKFP 342


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,503,848
Number of Sequences: 27780
Number of extensions: 386387
Number of successful extensions: 1411
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)