Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d04f
(639 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071212-1|AAL48834.1| 364|Drosophila melanogaster RE25729p pro... 205 5e-53
BT001756-1|AAN71511.1| 365|Drosophila melanogaster RH05604p pro... 68 9e-12
AY047573-1|AAK77305.1| 365|Drosophila melanogaster GH08474p pro... 68 9e-12
AE014297-4317|AAF56855.2| 365|Drosophila melanogaster CG11876-P... 68 9e-12
AE014297-4316|AAN14149.1| 365|Drosophila melanogaster CG11876-P... 68 9e-12
BT024274-1|ABC86336.1| 273|Drosophila melanogaster IP14839p pro... 46 4e-05
AE014297-4319|AAN14151.1| 273|Drosophila melanogaster CG11876-P... 46 4e-05
AE014297-4318|AAN14150.1| 273|Drosophila melanogaster CG11876-P... 46 4e-05
AY070857-1|AAL48479.1| 56|Drosophila melanogaster GM10545p pro... 30 3.0
Y14577-1|CAA74915.1| 539|Drosophila melanogaster delta-aminolev... 29 4.0
Y14576-1|CAA74914.1| 539|Drosophila melanogaster delta-aminolev... 29 4.0
AY084198-1|AAL89936.1| 539|Drosophila melanogaster SD01515p pro... 29 4.0
AE013599-3754|AAF47119.1| 539|Drosophila melanogaster CG3017-PA... 29 4.0
Y00843-1|CAA68766.1| 410|Drosophila melanogaster protein ( Dros... 28 9.3
AY553965-1|AAS90559.1| 748|Drosophila melanogaster thisbe protein. 28 9.3
AE014297-3536|AAF56290.2| 213|Drosophila melanogaster CG33339-P... 28 9.3
AE013599-1345|AAF58621.2| 748|Drosophila melanogaster CG12443-P... 28 9.3
>AY071212-1|AAL48834.1| 364|Drosophila melanogaster RE25729p
protein.
Length = 364
Score = 205 bits (500), Expect = 5e-53
Identities = 97/155 (62%), Positives = 109/155 (70%)
Frame = +2
Query: 137 SHFIYYPDKERPVDGETTKMNMMQAINNAMDITLKNNPTAVLFGEDVAFGGVFRCALGLQ 316
SHF YYP + G +MNM AINNAMD+ L N +A+LFGEDV FGGVFRC++ L+
Sbjct: 28 SHFTYYPTRM----GTGKRMNMFNAINNAMDLALDENKSALLFGEDVGFGGVFRCSVNLR 83
Query: 317 EKYGKDRVFNTPLCEQXXXXXXXXXXXXXXXXXXEIQFADYIFPAFDQIVNEAAKARYRS 496
KYG RVFNTPLCEQ EIQFADYIFP+FDQIVNEAAK RYRS
Sbjct: 84 NKYGSQRVFNTPLCEQGIAGFAIGVANTGATAIAEIQFADYIFPSFDQIVNEAAKYRYRS 143
Query: 497 GGEYDSGALTVRAPCSAVGHGGLYHSQSPEAFFAH 601
GG +D G+LT R PC AVGHG LYHSQSPEA+FAH
Sbjct: 144 GGLFDCGSLTFRVPCGAVGHGALYHSQSPEAYFAH 178
>BT001756-1|AAN71511.1| 365|Drosophila melanogaster RH05604p
protein.
Length = 365
Score = 68.1 bits (159), Expect = 9e-12
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Frame = +2
Query: 191 KMNMMQAINNAMDITLKNNPTAVLFGEDVA-FGGVFRCALGLQEKYGKDRVFNTPLCEQX 367
+M + A+N+A+D L + + GE+VA + G ++ + GL +KYG RV +TP+ E
Sbjct: 28 QMTVRDALNSALDDELARDDRVFILGEEVAQYDGAYKVSRGLWKKYGDKRVIDTPITEMG 87
Query: 368 XXXXXXXXXXXXXXXXXEIQFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSA 547
E ++ A D I+N AAK Y S G + + R P A
Sbjct: 88 FAGIAVGAAMAGLRPVCEFMTWNFSMQAIDHIINSAAKTFYMSAGAVNV-PIVFRGPNGA 146
Query: 548 VGHGGLYHSQSPEAFFAH 601
HSQ A++AH
Sbjct: 147 ASGVAAQHSQCFAAWYAH 164
>AY047573-1|AAK77305.1| 365|Drosophila melanogaster GH08474p
protein.
Length = 365
Score = 68.1 bits (159), Expect = 9e-12
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Frame = +2
Query: 191 KMNMMQAINNAMDITLKNNPTAVLFGEDVA-FGGVFRCALGLQEKYGKDRVFNTPLCEQX 367
+M + A+N+A+D L + + GE+VA + G ++ + GL +KYG RV +TP+ E
Sbjct: 28 QMTVRDALNSALDDELARDDRVFILGEEVAQYDGAYKVSRGLWKKYGDKRVIDTPITEMG 87
Query: 368 XXXXXXXXXXXXXXXXXEIQFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSA 547
E ++ A D I+N AAK Y S G + + R P A
Sbjct: 88 FAGIAVGAAMAGLRPVCEFMTWNFSMQAIDHIINSAAKTFYMSAGAVNV-PIVFRGPNGA 146
Query: 548 VGHGGLYHSQSPEAFFAH 601
HSQ A++AH
Sbjct: 147 ASGVAAQHSQCFAAWYAH 164
>AE014297-4317|AAF56855.2| 365|Drosophila melanogaster CG11876-PD,
isoform D protein.
Length = 365
Score = 68.1 bits (159), Expect = 9e-12
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Frame = +2
Query: 191 KMNMMQAINNAMDITLKNNPTAVLFGEDVA-FGGVFRCALGLQEKYGKDRVFNTPLCEQX 367
+M + A+N+A+D L + + GE+VA + G ++ + GL +KYG RV +TP+ E
Sbjct: 28 QMTVRDALNSALDDELARDDRVFILGEEVAQYDGAYKVSRGLWKKYGDKRVIDTPITEMG 87
Query: 368 XXXXXXXXXXXXXXXXXEIQFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSA 547
E ++ A D I+N AAK Y S G + + R P A
Sbjct: 88 FAGIAVGAAMAGLRPVCEFMTWNFSMQAIDHIINSAAKTFYMSAGAVNV-PIVFRGPNGA 146
Query: 548 VGHGGLYHSQSPEAFFAH 601
HSQ A++AH
Sbjct: 147 ASGVAAQHSQCFAAWYAH 164
>AE014297-4316|AAN14149.1| 365|Drosophila melanogaster CG11876-PA,
isoform A protein.
Length = 365
Score = 68.1 bits (159), Expect = 9e-12
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Frame = +2
Query: 191 KMNMMQAINNAMDITLKNNPTAVLFGEDVA-FGGVFRCALGLQEKYGKDRVFNTPLCEQX 367
+M + A+N+A+D L + + GE+VA + G ++ + GL +KYG RV +TP+ E
Sbjct: 28 QMTVRDALNSALDDELARDDRVFILGEEVAQYDGAYKVSRGLWKKYGDKRVIDTPITEMG 87
Query: 368 XXXXXXXXXXXXXXXXXEIQFADYIFPAFDQIVNEAAKARYRSGGEYDSGALTVRAPCSA 547
E ++ A D I+N AAK Y S G + + R P A
Sbjct: 88 FAGIAVGAAMAGLRPVCEFMTWNFSMQAIDHIINSAAKTFYMSAGAVNV-PIVFRGPNGA 146
Query: 548 VGHGGLYHSQSPEAFFAH 601
HSQ A++AH
Sbjct: 147 ASGVAAQHSQCFAAWYAH 164
>BT024274-1|ABC86336.1| 273|Drosophila melanogaster IP14839p
protein.
Length = 273
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 191 KMNMMQAINNAMDITLKNNPTAVLFGEDVA-FGGVFRCALGLQEKYGKDRVFNTPLCE 361
+M + A+N+A+D L + + GE+VA + G ++ + GL +KYG RV +TP+ E
Sbjct: 28 QMTVRDALNSALDDELARDDRVFILGEEVAQYDGAYKVSRGLWKKYGDKRVIDTPITE 85
>AE014297-4319|AAN14151.1| 273|Drosophila melanogaster CG11876-PC,
isoform C protein.
Length = 273
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 191 KMNMMQAINNAMDITLKNNPTAVLFGEDVA-FGGVFRCALGLQEKYGKDRVFNTPLCE 361
+M + A+N+A+D L + + GE+VA + G ++ + GL +KYG RV +TP+ E
Sbjct: 28 QMTVRDALNSALDDELARDDRVFILGEEVAQYDGAYKVSRGLWKKYGDKRVIDTPITE 85
>AE014297-4318|AAN14150.1| 273|Drosophila melanogaster CG11876-PB,
isoform B protein.
Length = 273
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 191 KMNMMQAINNAMDITLKNNPTAVLFGEDVA-FGGVFRCALGLQEKYGKDRVFNTPLCE 361
+M + A+N+A+D L + + GE+VA + G ++ + GL +KYG RV +TP+ E
Sbjct: 28 QMTVRDALNSALDDELARDDRVFILGEEVAQYDGAYKVSRGLWKKYGDKRVIDTPITE 85
>AY070857-1|AAL48479.1| 56|Drosophila melanogaster GM10545p
protein.
Length = 56
Score = 29.9 bits (64), Expect = 3.0
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 274 IFTEQYSSWIILQCDVHCIVYCLH-HIHLC 188
IF ++ SW + C +HC+ CL ++ +C
Sbjct: 15 IFKTEFFSWTLQPCSLHCLPVCLSVYLSVC 44
>Y14577-1|CAA74915.1| 539|Drosophila melanogaster
delta-aminolevulinate synthase protein.
Length = 539
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 308 PKHI*RHPRMRHLHRTIQQLDYS 240
PKHI RH + HLH+ ++Q D S
Sbjct: 248 PKHIFRHNDVDHLHQLLKQTDKS 270
>Y14576-1|CAA74914.1| 539|Drosophila melanogaster
delta-aminolevulinate synthase protein.
Length = 539
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 308 PKHI*RHPRMRHLHRTIQQLDYS 240
PKHI RH + HLH+ ++Q D S
Sbjct: 248 PKHIFRHNDVDHLHQLLKQTDKS 270
>AY084198-1|AAL89936.1| 539|Drosophila melanogaster SD01515p
protein.
Length = 539
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 308 PKHI*RHPRMRHLHRTIQQLDYS 240
PKHI RH + HLH+ ++Q D S
Sbjct: 248 PKHIFRHNDVDHLHQLLKQTDKS 270
>AE013599-3754|AAF47119.1| 539|Drosophila melanogaster CG3017-PA
protein.
Length = 539
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 308 PKHI*RHPRMRHLHRTIQQLDYS 240
PKHI RH + HLH+ ++Q D S
Sbjct: 248 PKHIFRHNDVDHLHQLLKQTDKS 270
>Y00843-1|CAA68766.1| 410|Drosophila melanogaster protein (
Drosophila melanogasterH2.0 homeobox gene. ).
Length = 410
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 481 SEVQIW-RGVRQRRPHGPRALQCGRARRTLPLPESGGLLCTCPRSPGGGASRA 636
++V++W + R + H L+ G+ ++ +PESGG+ T S G A
Sbjct: 329 AQVKVWFQNRRMKWRHTRENLKSGQEKQPSAVPESGGVFKTSTPSGDGAPQEA 381
>AY553965-1|AAS90559.1| 748|Drosophila melanogaster thisbe protein.
Length = 748
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 7 DNSLLPNSTVVGFRDVKNDKFKYKKY 84
D S + N T+VGF D N++FK Y
Sbjct: 49 DTSQIQNITIVGFPDYLNNEFKIALY 74
>AE014297-3536|AAF56290.2| 213|Drosophila melanogaster CG33339-PA
protein.
Length = 213
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 116 NYAKRMSSHFIYYPDKERPVDGETTKMNMMQAINNAM 226
+Y+KR S++ YY D R E+ ++++ I AM
Sbjct: 109 SYSKRPESYYPYYADPYRNAHYESFQLDLRSCIKRAM 145
>AE013599-1345|AAF58621.2| 748|Drosophila melanogaster CG12443-PA
protein.
Length = 748
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 7 DNSLLPNSTVVGFRDVKNDKFKYKKY 84
D S + N T+VGF D N++FK Y
Sbjct: 49 DTSQIQNITIVGFPDYLNNEFKIALY 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,419,712
Number of Sequences: 53049
Number of extensions: 603834
Number of successful extensions: 1807
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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