Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d03f
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 271 2e-73
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 271 2e-73
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 271 3e-73
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 271 3e-73
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 271 3e-73
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 268 2e-72
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 268 2e-72
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 268 2e-72
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 265 2e-71
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 28 4.7
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 28 4.7
U22832-1|AAA64507.1| 293|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF045642-5|AAC02582.1| 374|Caenorhabditis elegans Hypothetical ... 28 6.2
Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical pr... 27 8.2
AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 271 bits (665), Expect = 2e-73
Identities = 135/187 (72%), Positives = 155/187 (82%), Gaps = 7/187 (3%)
Frame = +1
Query: 85 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 261
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 262 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 426
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 427 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMTT 603
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF I+EGLMTT
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 604 VHATTAT 624
VHA TAT
Sbjct: 184 VHAVTAT 190
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 271 bits (665), Expect = 2e-73
Identities = 135/187 (72%), Positives = 155/187 (82%), Gaps = 7/187 (3%)
Frame = +1
Query: 85 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 261
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 262 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 426
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 427 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMTT 603
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF I+EGLMTT
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 604 VHATTAT 624
VHA TAT
Sbjct: 184 VHAVTAT 190
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 271 bits (664), Expect = 3e-73
Identities = 134/187 (71%), Positives = 155/187 (82%), Gaps = 7/187 (3%)
Frame = +1
Query: 85 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 261
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 262 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 426
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 427 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMTT 603
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLMTT
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 604 VHATTAT 624
VHA TAT
Sbjct: 184 VHAVTAT 190
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 271 bits (664), Expect = 3e-73
Identities = 134/187 (71%), Positives = 155/187 (82%), Gaps = 7/187 (3%)
Frame = +1
Query: 85 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 261
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 262 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 426
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 427 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMTT 603
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLMTT
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 604 VHATTAT 624
VHA TAT
Sbjct: 184 VHAVTAT 190
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 271 bits (664), Expect = 3e-73
Identities = 134/187 (71%), Positives = 155/187 (82%), Gaps = 7/187 (3%)
Frame = +1
Query: 85 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 261
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 262 DGFLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKK 426
FL+V + +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 427 VIISAPSADAPMFVVGVNLEAYDPS-FKVISNASCTTNCLAPLAKVIHDNFEIVEGLMTT 603
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLMTT
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 604 VHATTAT 624
VHA TAT
Sbjct: 184 VHAVTAT 190
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 268 bits (657), Expect = 2e-72
Identities = 132/185 (71%), Positives = 156/185 (84%), Gaps = 7/185 (3%)
Frame = +1
Query: 91 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 267
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 268 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 432
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 433 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMTTVH 609
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLMTTVH
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 610 ATTAT 624
A TAT
Sbjct: 186 AVTAT 190
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 268 bits (657), Expect = 2e-72
Identities = 132/185 (71%), Positives = 156/185 (84%), Gaps = 7/185 (3%)
Frame = +1
Query: 91 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 267
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 268 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 432
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 433 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMTTVH 609
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLMTTVH
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 610 ATTAT 624
A TAT
Sbjct: 186 AVTAT 190
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 268 bits (657), Expect = 2e-72
Identities = 132/185 (71%), Positives = 156/185 (84%), Gaps = 7/185 (3%)
Frame = +1
Query: 91 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 267
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 268 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 432
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 433 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMTTVH 609
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLMTTVH
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 610 ATTAT 624
A TAT
Sbjct: 186 AVTAT 190
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 265 bits (650), Expect = 2e-71
Identities = 131/185 (70%), Positives = 155/185 (83%), Gaps = 7/185 (3%)
Frame = +1
Query: 91 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 267
+GINGFGRIGRLVLRA++EK + V A+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 268 FLVV-----NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVI 432
+L+V + +KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 433 ISAPSADAPMFVVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMTTVH 609
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLMTTVH
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
Query: 610 ATTAT 624
A TAT
Sbjct: 186 AVTAT 190
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 29.9 bits (64), Expect = 1.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 96 NQWIWPHWPFGAP 134
N+ +WPHW FG+P
Sbjct: 426 NEQVWPHWRFGSP 438
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 188 PMKGSFIATT*APFSIEARSTKRP-MRPNPLIPIFDMLSASYR 63
PM S T + S+E+ TKR R NP+ P FD++ + R
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVIDGTAR 211
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 188 PMKGSFIATT*APFSIEARSTKRP-MRPNPLIPIFDMLSASYR 63
PM S T + S+E+ TKR R NP+ P FD++ + R
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVIDGTAR 211
>U22832-1|AAA64507.1| 293|Caenorhabditis elegans Hypothetical
protein C09F5.2 protein.
Length = 293
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 154 AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDGFLVVNGN 288
A +V + F+ Y+++ + + GRFK V+ FL V N
Sbjct: 235 AMLVPVGVVFVVFSYLIHKNRVSHSLGRFKHKVDTMKQFLDVEAN 279
>AF045642-5|AAC02582.1| 374|Caenorhabditis elegans Hypothetical
protein C17H12.3 protein.
Length = 374
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +2
Query: 35 WWWSVIQQIFYNLPITCQKLESMDLAALAVWCSVLLLKRELK 160
+WW ++QQ + + C+ +E+ W + K+E+K
Sbjct: 165 FWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVK 206
>Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical
protein R09D1.5 protein.
Length = 429
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 303 ENGNFVTVNNKESI-LNLNTALKTAMGGIILEKINHIVKTDE 181
E GNF+T NK+SI L A++ +GG+ + ++ + +E
Sbjct: 365 ETGNFLTFENKKSIEAKLAYAIEHNLGGVWIHLVDKDNENEE 406
>AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical
protein B0524.4 protein.
Length = 772
Score = 27.5 bits (58), Expect = 8.2
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = +1
Query: 241 KGSVEVQDGFLVVNGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGA 420
KG+++ D F V G K+A E GK+GA+ G KA A GGA
Sbjct: 707 KGTLKELDAFFVAYGKKLA---EGGKAGNSGGKSGAKNGPGKAGAKNEPGKAGA--GGGA 761
Query: 421 KK 426
KK
Sbjct: 762 KK 763
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,883,016
Number of Sequences: 27780
Number of extensions: 321954
Number of successful extensions: 813
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -