Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d02r
         (513 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M21045-2|AAA28853.1|  151|Drosophila melanogaster protein ( D.me...   212   2e-55
M21045-1|AAA28852.1|  151|Drosophila melanogaster protein ( D.me...   212   2e-55
AY071321-1|AAL48943.1|  151|Drosophila melanogaster RE34379p pro...   212   2e-55
AE014298-1091|AAF46299.1|  151|Drosophila melanogaster CG1527-PA...   212   2e-55
AE014298-1090|AAF46297.1|  151|Drosophila melanogaster CG1524-PB...   212   2e-55
AE014298-1089|AAF46298.1|  151|Drosophila melanogaster CG1524-PA...   212   2e-55
AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p pro...   136   2e-32

>M21045-2|AAA28853.1|  151|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S14 A and B genes,
           complete cds. ).
          Length = 151

 Score =  212 bits (518), Expect = 2e-55
 Identities = 111/140 (79%), Positives = 113/140 (80%)
 Frame = -3

Query: 472 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 293
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 292 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 113
           KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA           GAQ       
Sbjct: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120

Query: 112 XXSMKIGRIEDVTPVPSDST 53
             SMKIGRIEDVTP+PSDST
Sbjct: 121 RSSMKIGRIEDVTPIPSDST 140


>M21045-1|AAA28852.1|  151|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S14 A and B genes,
           complete cds. ).
          Length = 151

 Score =  212 bits (518), Expect = 2e-55
 Identities = 111/140 (79%), Positives = 113/140 (80%)
 Frame = -3

Query: 472 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 293
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 292 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 113
           KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA           GAQ       
Sbjct: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120

Query: 112 XXSMKIGRIEDVTPVPSDST 53
             SMKIGRIEDVTP+PSDST
Sbjct: 121 RSSMKIGRIEDVTPIPSDST 140


>AY071321-1|AAL48943.1|  151|Drosophila melanogaster RE34379p
           protein.
          Length = 151

 Score =  212 bits (518), Expect = 2e-55
 Identities = 111/140 (79%), Positives = 113/140 (80%)
 Frame = -3

Query: 472 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 293
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 292 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 113
           KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA           GAQ       
Sbjct: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120

Query: 112 XXSMKIGRIEDVTPVPSDST 53
             SMKIGRIEDVTP+PSDST
Sbjct: 121 RSSMKIGRIEDVTPIPSDST 140


>AE014298-1091|AAF46299.1|  151|Drosophila melanogaster CG1527-PA
           protein.
          Length = 151

 Score =  212 bits (518), Expect = 2e-55
 Identities = 111/140 (79%), Positives = 113/140 (80%)
 Frame = -3

Query: 472 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 293
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 292 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 113
           KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA           GAQ       
Sbjct: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120

Query: 112 XXSMKIGRIEDVTPVPSDST 53
             SMKIGRIEDVTP+PSDST
Sbjct: 121 RSSMKIGRIEDVTPIPSDST 140


>AE014298-1090|AAF46297.1|  151|Drosophila melanogaster CG1524-PB,
           isoform B protein.
          Length = 151

 Score =  212 bits (518), Expect = 2e-55
 Identities = 111/140 (79%), Positives = 113/140 (80%)
 Frame = -3

Query: 472 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 293
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 292 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 113
           KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA           GAQ       
Sbjct: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120

Query: 112 XXSMKIGRIEDVTPVPSDST 53
             SMKIGRIEDVTP+PSDST
Sbjct: 121 RSSMKIGRIEDVTPIPSDST 140


>AE014298-1089|AAF46298.1|  151|Drosophila melanogaster CG1524-PA,
           isoform A protein.
          Length = 151

 Score =  212 bits (518), Expect = 2e-55
 Identities = 111/140 (79%), Positives = 113/140 (80%)
 Frame = -3

Query: 472 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 293
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 292 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXGAQXXXXXXX 113
           KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA           GAQ       
Sbjct: 61  KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALA 120

Query: 112 XXSMKIGRIEDVTPVPSDST 53
             SMKIGRIEDVTP+PSDST
Sbjct: 121 RSSMKIGRIEDVTPIPSDST 140


>AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p
           protein.
          Length = 123

 Score =  136 bits (329), Expect = 2e-32
 Identities = 67/75 (89%), Positives = 68/75 (90%)
 Frame = -3

Query: 472 MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 293
           MAPRK KV KEEVQV LGPQ   GE VFGVAHI+ASFNDTFVHVTDLSGRETIARVTGGM
Sbjct: 1   MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGM 60

Query: 292 KVKADRDEASPYAAM 248
           KVKADRDEASPYAAM
Sbjct: 61  KVKADRDEASPYAAM 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,265,568
Number of Sequences: 53049
Number of extensions: 532631
Number of successful extensions: 1330
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)