Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d01r
(761 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070606-1|AAL48077.1| 147|Drosophila melanogaster RE71014p pro... 113 2e-25
AE014134-1462|AAF52642.1| 147|Drosophila melanogaster CG7781-PA... 113 2e-25
AY071652-1|AAL49274.1| 148|Drosophila melanogaster RE73208p pro... 56 5e-08
AE014134-1464|AAN11164.1| 148|Drosophila melanogaster CG14275-P... 56 5e-08
AE014134-1463|AAF52643.1| 148|Drosophila melanogaster CG14275-P... 56 5e-08
BT010209-1|AAQ23527.1| 155|Drosophila melanogaster RH58203p pro... 50 3e-06
AY069299-1|AAL39444.1| 155|Drosophila melanogaster HL02087p pro... 50 3e-06
AE013599-1772|AAO41394.1| 155|Drosophila melanogaster CG6329-PD... 50 3e-06
AE013599-1771|AAG22271.1| 155|Drosophila melanogaster CG6329-PC... 50 3e-06
AE013599-1770|AAF58332.1| 155|Drosophila melanogaster CG6329-PB... 50 3e-06
AE013599-1769|AAM71008.1| 155|Drosophila melanogaster CG6329-PA... 50 3e-06
AE014134-2176|AAF53178.1| 151|Drosophila melanogaster CG17218-P... 41 0.002
AE014297-3266|AAF56092.1| 768|Drosophila melanogaster CG17111-P... 34 0.24
BT015962-1|AAV36847.1| 146|Drosophila melanogaster RH46294p pro... 30 3.0
AE014134-3310|AAF53941.2| 146|Drosophila melanogaster CG14401-P... 30 3.0
BT025061-1|ABE73232.1| 388|Drosophila melanogaster IP15635p pro... 30 4.0
AF217281-1|AAF27637.1| 1616|Drosophila melanogaster ecdysone-ind... 30 4.0
AE014296-1440|AAF50429.2| 1616|Drosophila melanogaster CG32356-P... 30 4.0
AY071242-1|AAL48864.1| 149|Drosophila melanogaster RE28342p pro... 29 6.9
AE014298-984|AAF46227.1| 149|Drosophila melanogaster CG14430-PA... 29 6.9
AY070650-1|AAL48121.1| 214|Drosophila melanogaster RH03540p pro... 29 9.2
AE014298-1179|AAF46374.2| 214|Drosophila melanogaster CG15347-P... 29 9.2
>AY070606-1|AAL48077.1| 147|Drosophila melanogaster RE71014p
protein.
Length = 147
Score = 113 bits (272), Expect = 2e-25
Identities = 52/111 (46%), Positives = 67/111 (60%), Gaps = 8/111 (7%)
Frame = -2
Query: 730 AIVCYQCNSHNDSRCIMEDLPDTLRQPC--------KSTDTMCRKISQVVEFEMNGMPPD 575
AI C+ CNSH D+ C ++ PD L + C K T CRKI+Q++EF +N +PPD
Sbjct: 21 AIKCFVCNSHKDANCALDIPPDNLLKDCDEQYSSRGKGIPTYCRKITQIIEFSVNSLPPD 80
Query: 574 NRVIRGCGWDESNYKGRCYQRSGFGGRQEVCSCLTDGCNSASLPVMGTTVM 422
+RVIR C + CYQR+GFGGRQ VCSC TD CN A MG + +
Sbjct: 81 SRVIRTCAYQNQTSTNYCYQRAGFGGRQVVCSCDTDNCNGAG--AMGASAL 129
>AE014134-1462|AAF52642.1| 147|Drosophila melanogaster CG7781-PA
protein.
Length = 147
Score = 113 bits (272), Expect = 2e-25
Identities = 52/111 (46%), Positives = 67/111 (60%), Gaps = 8/111 (7%)
Frame = -2
Query: 730 AIVCYQCNSHNDSRCIMEDLPDTLRQPC--------KSTDTMCRKISQVVEFEMNGMPPD 575
AI C+ CNSH D+ C ++ PD L + C K T CRKI+Q++EF +N +PPD
Sbjct: 21 AIKCFVCNSHKDANCALDIPPDNLLKDCDEQYSSRGKGIPTYCRKITQIIEFSVNSLPPD 80
Query: 574 NRVIRGCGWDESNYKGRCYQRSGFGGRQEVCSCLTDGCNSASLPVMGTTVM 422
+RVIR C + CYQR+GFGGRQ VCSC TD CN A MG + +
Sbjct: 81 SRVIRTCAYQNQTSTNYCYQRAGFGGRQVVCSCDTDNCNGAG--AMGASAL 129
>AY071652-1|AAL49274.1| 148|Drosophila melanogaster RE73208p
protein.
Length = 148
Score = 56.0 bits (129), Expect = 5e-08
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Frame = -2
Query: 730 AIVCYQCNSHNDSRC--IMEDLPDTLRQPCKSTDTM--------CRKISQVVEFEMNGMP 581
AI C+QCNSH++ C ++ + P R TD + CRK V+ FE N
Sbjct: 23 AIRCHQCNSHDNEDCGGLVVNTPRAQRDNQYLTDCVPPSGEVAFCRKT--VINFEQND-- 78
Query: 580 PDNRVIRGCGWDESNYKGRCYQRSGFGGRQEVCSCLTDGCNSAS 449
+ R+ R CG+ + C+ G +Q +C+C +GCN AS
Sbjct: 79 -ERRIERSCGFIPEKIQNACFTADNEGYKQIICTCPDEGCNGAS 121
>AE014134-1464|AAN11164.1| 148|Drosophila melanogaster CG14275-PB,
isoform B protein.
Length = 148
Score = 56.0 bits (129), Expect = 5e-08
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Frame = -2
Query: 730 AIVCYQCNSHNDSRC--IMEDLPDTLRQPCKSTDTM--------CRKISQVVEFEMNGMP 581
AI C+QCNSH++ C ++ + P R TD + CRK V+ FE N
Sbjct: 23 AIRCHQCNSHDNEDCGGLVVNTPRAQRDNQYLTDCVPPSGEVAFCRKT--VINFEQND-- 78
Query: 580 PDNRVIRGCGWDESNYKGRCYQRSGFGGRQEVCSCLTDGCNSAS 449
+ R+ R CG+ + C+ G +Q +C+C +GCN AS
Sbjct: 79 -ERRIERSCGFIPEKIQNACFTADNEGYKQIICTCPDEGCNGAS 121
>AE014134-1463|AAF52643.1| 148|Drosophila melanogaster CG14275-PA,
isoform A protein.
Length = 148
Score = 56.0 bits (129), Expect = 5e-08
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Frame = -2
Query: 730 AIVCYQCNSHNDSRC--IMEDLPDTLRQPCKSTDTM--------CRKISQVVEFEMNGMP 581
AI C+QCNSH++ C ++ + P R TD + CRK V+ FE N
Sbjct: 23 AIRCHQCNSHDNEDCGGLVVNTPRAQRDNQYLTDCVPPSGEVAFCRKT--VINFEQND-- 78
Query: 580 PDNRVIRGCGWDESNYKGRCYQRSGFGGRQEVCSCLTDGCNSAS 449
+ R+ R CG+ + C+ G +Q +C+C +GCN AS
Sbjct: 79 -ERRIERSCGFIPEKIQNACFTADNEGYKQIICTCPDEGCNGAS 121
>BT010209-1|AAQ23527.1| 155|Drosophila melanogaster RH58203p
protein.
Length = 155
Score = 50.0 bits (114), Expect = 3e-06
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Frame = -2
Query: 757 LCAVCGASPAIVCYQCNSHNDSRC-------IMEDLPDTLRQPC-----KSTDTMCRKIS 614
LC + + A++CY CNS D RC + ++ + ++P K T+CRK
Sbjct: 15 LCCI-QVTTALMCYDCNSEFDPRCGDPFEPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTV 73
Query: 613 QVVEFEMNGMPPDNRVIRGCGW-DESNYKGRCYQRSGFGGRQEV-CSCLTDGCNSASLPV 440
Q + + R++RGCG+ + N +C +RSG + CSC D CN A+ P
Sbjct: 74 QKIYGK-------TRIVRGCGYIPDENTDNKCVRRSGTHDVAAIYCSCTKDLCNGANSPA 126
Query: 439 MGTTVML 419
G +ML
Sbjct: 127 -GQWMML 132
>AY069299-1|AAL39444.1| 155|Drosophila melanogaster HL02087p
protein.
Length = 155
Score = 50.0 bits (114), Expect = 3e-06
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Frame = -2
Query: 757 LCAVCGASPAIVCYQCNSHNDSRC-------IMEDLPDTLRQPC-----KSTDTMCRKIS 614
LC + + A++CY CNS D RC + ++ + ++P K T+CRK
Sbjct: 15 LCCI-QVTTALMCYDCNSEFDPRCGDPFEPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTV 73
Query: 613 QVVEFEMNGMPPDNRVIRGCGW-DESNYKGRCYQRSGFGGRQEV-CSCLTDGCNSASLPV 440
Q + + R++RGCG+ + N +C +RSG + CSC D CN A+ P
Sbjct: 74 QKIYGK-------TRIVRGCGYIPDENTDNKCVRRSGTHDVAAIYCSCTKDLCNGANSPA 126
Query: 439 MGTTVML 419
G +ML
Sbjct: 127 -GQWMML 132
>AE013599-1772|AAO41394.1| 155|Drosophila melanogaster CG6329-PD,
isoform D protein.
Length = 155
Score = 50.0 bits (114), Expect = 3e-06
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Frame = -2
Query: 757 LCAVCGASPAIVCYQCNSHNDSRC-------IMEDLPDTLRQPC-----KSTDTMCRKIS 614
LC + + A++CY CNS D RC + ++ + ++P K T+CRK
Sbjct: 15 LCCI-QVTTALMCYDCNSEFDPRCGDPFEPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTV 73
Query: 613 QVVEFEMNGMPPDNRVIRGCGW-DESNYKGRCYQRSGFGGRQEV-CSCLTDGCNSASLPV 440
Q + + R++RGCG+ + N +C +RSG + CSC D CN A+ P
Sbjct: 74 QKIYGK-------TRIVRGCGYIPDENTDNKCVRRSGTHDVAAIYCSCTKDLCNGANSPA 126
Query: 439 MGTTVML 419
G +ML
Sbjct: 127 -GQWMML 132
>AE013599-1771|AAG22271.1| 155|Drosophila melanogaster CG6329-PC,
isoform C protein.
Length = 155
Score = 50.0 bits (114), Expect = 3e-06
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Frame = -2
Query: 757 LCAVCGASPAIVCYQCNSHNDSRC-------IMEDLPDTLRQPC-----KSTDTMCRKIS 614
LC + + A++CY CNS D RC + ++ + ++P K T+CRK
Sbjct: 15 LCCI-QVTTALMCYDCNSEFDPRCGDPFEPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTV 73
Query: 613 QVVEFEMNGMPPDNRVIRGCGW-DESNYKGRCYQRSGFGGRQEV-CSCLTDGCNSASLPV 440
Q + + R++RGCG+ + N +C +RSG + CSC D CN A+ P
Sbjct: 74 QKIYGK-------TRIVRGCGYIPDENTDNKCVRRSGTHDVAAIYCSCTKDLCNGANSPA 126
Query: 439 MGTTVML 419
G +ML
Sbjct: 127 -GQWMML 132
>AE013599-1770|AAF58332.1| 155|Drosophila melanogaster CG6329-PB,
isoform B protein.
Length = 155
Score = 50.0 bits (114), Expect = 3e-06
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Frame = -2
Query: 757 LCAVCGASPAIVCYQCNSHNDSRC-------IMEDLPDTLRQPC-----KSTDTMCRKIS 614
LC + + A++CY CNS D RC + ++ + ++P K T+CRK
Sbjct: 15 LCCI-QVTTALMCYDCNSEFDPRCGDPFEPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTV 73
Query: 613 QVVEFEMNGMPPDNRVIRGCGW-DESNYKGRCYQRSGFGGRQEV-CSCLTDGCNSASLPV 440
Q + + R++RGCG+ + N +C +RSG + CSC D CN A+ P
Sbjct: 74 QKIYGK-------TRIVRGCGYIPDENTDNKCVRRSGTHDVAAIYCSCTKDLCNGANSPA 126
Query: 439 MGTTVML 419
G +ML
Sbjct: 127 -GQWMML 132
>AE013599-1769|AAM71008.1| 155|Drosophila melanogaster CG6329-PA,
isoform A protein.
Length = 155
Score = 50.0 bits (114), Expect = 3e-06
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Frame = -2
Query: 757 LCAVCGASPAIVCYQCNSHNDSRC-------IMEDLPDTLRQPC-----KSTDTMCRKIS 614
LC + + A++CY CNS D RC + ++ + ++P K T+CRK
Sbjct: 15 LCCI-QVTTALMCYDCNSEFDPRCGDPFEPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTV 73
Query: 613 QVVEFEMNGMPPDNRVIRGCGW-DESNYKGRCYQRSGFGGRQEV-CSCLTDGCNSASLPV 440
Q + + R++RGCG+ + N +C +RSG + CSC D CN A+ P
Sbjct: 74 QKIYGK-------TRIVRGCGYIPDENTDNKCVRRSGTHDVAAIYCSCTKDLCNGANSPA 126
Query: 439 MGTTVML 419
G +ML
Sbjct: 127 -GQWMML 132
>AE014134-2176|AAF53178.1| 151|Drosophila melanogaster CG17218-PA,
isoform A protein.
Length = 151
Score = 40.7 bits (91), Expect = 0.002
Identities = 40/125 (32%), Positives = 52/125 (41%), Gaps = 17/125 (13%)
Frame = -2
Query: 757 LCAVCGASPAIVCYQCNSHNDSRCIMEDLPDTLR-QPCKSTD----------TMCRKISQ 611
LC + AI C+ C S ND +C TL C+ TMCRKI Q
Sbjct: 14 LCCLLQLGQAIKCWDCRSDNDPKCGDPFDNSTLAITDCQQAPELEHLKGVRPTMCRKIRQ 73
Query: 610 VVEFEMNGMPPDNRVIRGCGW-DESNYKGR---CYQRSG-FGGRQEVCSCLT-DGCNSAS 449
V E R R C + E +G C R+G + E C+C + DGCNSA
Sbjct: 74 KVHGEW-------RYFRSCAYMGEPGIEGDERFCLMRTGSYNIFMEFCTCNSKDGCNSAG 126
Query: 448 LPVMG 434
+ +G
Sbjct: 127 IHRLG 131
>AE014297-3266|AAF56092.1| 768|Drosophila melanogaster CG17111-PA
protein.
Length = 768
Score = 33.9 bits (74), Expect = 0.24
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 129 HLGHVCVNTSMLLELFIVYLHCTANLL 209
HL +VC+N S+L+ LFI +L C LL
Sbjct: 699 HLDNVCINQSLLIALFIFWLICQVALL 725
>BT015962-1|AAV36847.1| 146|Drosophila melanogaster RH46294p
protein.
Length = 146
Score = 30.3 bits (65), Expect = 3.0
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Frame = -2
Query: 757 LCAVCGASPAIVCYQCNSHNDSRC----IMEDLPDTLRQPCKSTDTMCRKISQVVEFEMN 590
L + ++ AI CY+C+S N+ C + +D+ T + ++ + + + ++
Sbjct: 13 LVTLASSARAITCYECDSVNNPGCGERFVGDDISTTDCDVVANMRSLGAEATCLTKYH-E 71
Query: 589 GMPPDNRVI-RGCGWDESNYKG-RCYQRSG----FGGRQEVCSCLTDGCNSAS-LPVMGT 431
GMP D R + R C + +++ G C F C TD CN+A+ L +
Sbjct: 72 GMPGDTRFVRRSCYFGDASPIGVSCDDGPDPVVPFMNFLGCTLCDTDLCNAAAGLSTLPL 131
Query: 430 TVMLLTLALL 401
+ L L LL
Sbjct: 132 VIALSILGLL 141
>AE014134-3310|AAF53941.2| 146|Drosophila melanogaster CG14401-PA
protein.
Length = 146
Score = 30.3 bits (65), Expect = 3.0
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Frame = -2
Query: 757 LCAVCGASPAIVCYQCNSHNDSRC----IMEDLPDTLRQPCKSTDTMCRKISQVVEFEMN 590
L + ++ AI CY+C+S N+ C + +D+ T + ++ + + + ++
Sbjct: 13 LVTLASSARAITCYECDSVNNPGCGERFVGDDISTTDCDVVANMRSLGAEATCLTKYH-E 71
Query: 589 GMPPDNRVI-RGCGWDESNYKG-RCYQRSG----FGGRQEVCSCLTDGCNSAS-LPVMGT 431
GMP D R + R C + +++ G C F C TD CN+A+ L +
Sbjct: 72 GMPGDTRFVRRSCYFGDASPIGVSCDDGPDPVVPFMNFLGCTLCDTDLCNAAAGLSTLPL 131
Query: 430 TVMLLTLALL 401
+ L L LL
Sbjct: 132 VIALSILGLL 141
>BT025061-1|ABE73232.1| 388|Drosophila melanogaster IP15635p
protein.
Length = 388
Score = 29.9 bits (64), Expect = 4.0
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 753 VRFVEQAQQSSATNATVTTTPDASWR-TCRTRCGSRASPLT 634
V VEQ S+ T T TTTP + R T RT + A+P T
Sbjct: 196 VEKVEQPASSTTTTTTTTTTPRPTTRTTSRTTTTTTAAPPT 236
>AF217281-1|AAF27637.1| 1616|Drosophila melanogaster
ecdysone-inducible gene E1 protein.
Length = 1616
Score = 29.9 bits (64), Expect = 4.0
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 753 VRFVEQAQQSSATNATVTTTPDASWR-TCRTRCGSRASPLT 634
V VEQ S+ T T TTTP + R T RT + A+P T
Sbjct: 196 VEKVEQPASSTTTTTTTTTTPRPTTRTTSRTTTTTTAAPPT 236
>AE014296-1440|AAF50429.2| 1616|Drosophila melanogaster CG32356-PA,
isoform A protein.
Length = 1616
Score = 29.9 bits (64), Expect = 4.0
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 753 VRFVEQAQQSSATNATVTTTPDASWR-TCRTRCGSRASPLT 634
V VEQ S+ T T TTTP + R T RT + A+P T
Sbjct: 196 VEKVEQPASSTTTTTTTTTTPRPTTRTTSRTTTTTTAAPPT 236
>AY071242-1|AAL48864.1| 149|Drosophila melanogaster RE28342p
protein.
Length = 149
Score = 29.1 bits (62), Expect = 6.9
Identities = 38/125 (30%), Positives = 47/125 (37%), Gaps = 7/125 (5%)
Frame = -2
Query: 754 CAVCGASPAIVCYQCNSHNDSRCIMEDLPDTLRQPCKSTDTMCRKISQVVEFEMNGMPPD 575
C VC S +QC + D+PD Q C S + V FE G+
Sbjct: 34 CYVCDTSDTEHPFQCGEWFERY----DIPDIQPQNCSSVHGAQFCVKHVGRFE-GGIGAK 88
Query: 574 NRVIRGCGW-DESNYKGRCYQRSGFGGRQEVCSCL----TDGCNSASLPVM--GTTVMLL 416
R C D NY C G R + SC+ TDGCN+A + G LL
Sbjct: 89 ----RFCSSKDMGNY---CDYVRNKGDRMDYRSCIYTCDTDGCNAAGRLELEWGVAAALL 141
Query: 415 TLALL 401
TL L
Sbjct: 142 TLTWL 146
>AE014298-984|AAF46227.1| 149|Drosophila melanogaster CG14430-PA
protein.
Length = 149
Score = 29.1 bits (62), Expect = 6.9
Identities = 38/125 (30%), Positives = 47/125 (37%), Gaps = 7/125 (5%)
Frame = -2
Query: 754 CAVCGASPAIVCYQCNSHNDSRCIMEDLPDTLRQPCKSTDTMCRKISQVVEFEMNGMPPD 575
C VC S +QC + D+PD Q C S + V FE G+
Sbjct: 34 CYVCDTSDTEHPFQCGEWFERY----DIPDIQPQNCSSVHGAQFCVKHVGRFE-GGIGAK 88
Query: 574 NRVIRGCGW-DESNYKGRCYQRSGFGGRQEVCSCL----TDGCNSASLPVM--GTTVMLL 416
R C D NY C G R + SC+ TDGCN+A + G LL
Sbjct: 89 ----RFCSSKDMGNY---CDYVRNKGDRMDYRSCIYTCDTDGCNAAGRLELEWGVAAALL 141
Query: 415 TLALL 401
TL L
Sbjct: 142 TLTWL 146
>AY070650-1|AAL48121.1| 214|Drosophila melanogaster RH03540p
protein.
Length = 214
Score = 28.7 bits (61), Expect = 9.2
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = -2
Query: 721 CYQCNSHNDSRCIMEDLPDTLRQPCKSTDTMCRKISQVVEFEMNGMPPDNRVIRGCGWDE 542
C QCNS ++ RC + L L + C + C S+V+ D IRGC D
Sbjct: 22 CIQCNSKDNERCATDPL-SLLNRNCSDGSSNC--YSRVL---------DGYTIRGCAVDL 69
Query: 541 SN-YKGRCYQRSGFGGRQEVCSCLTDGCNSASLPV 440
N + C ++C+ ++GCN + P+
Sbjct: 70 DNATRNSCNNEL----LCQLCT-YSEGCNRNTFPL 99
>AE014298-1179|AAF46374.2| 214|Drosophila melanogaster CG15347-PA
protein.
Length = 214
Score = 28.7 bits (61), Expect = 9.2
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = -2
Query: 721 CYQCNSHNDSRCIMEDLPDTLRQPCKSTDTMCRKISQVVEFEMNGMPPDNRVIRGCGWDE 542
C QCNS ++ RC + L L + C + C S+V+ D IRGC D
Sbjct: 22 CIQCNSKDNERCATDPL-SLLNRNCSDGSSNC--YSRVL---------DGYTIRGCAVDL 69
Query: 541 SN-YKGRCYQRSGFGGRQEVCSCLTDGCNSASLPV 440
N + C ++C+ ++GCN + P+
Sbjct: 70 DNATRNSCNNEL----LCQLCT-YSEGCNRNTFPL 99
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,132,263
Number of Sequences: 53049
Number of extensions: 575493
Number of successful extensions: 1940
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1932
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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