Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c20r
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VPM1 Cluster: CG3645-PA, isoform A; n=2; Diptera|Rep:... 171 1e-41
UniRef50_Q6P1R4 Cluster: tRNA-dihydrouridine synthase 1-like; n=... 87 4e-16
UniRef50_UPI0000586CAD Cluster: PREDICTED: similar to Dus1l prot... 80 6e-14
UniRef50_Q4S086 Cluster: Chromosome undetermined SCAF14784, whol... 77 3e-13
UniRef50_Q9XVN8 Cluster: Putative uncharacterized protein; n=2; ... 50 5e-05
UniRef50_Q5CSA9 Cluster: Dus1p, tRNA dihydrouridine synthase; n=... 47 5e-04
UniRef50_Q55BV8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.014
UniRef50_Q9HGN6 Cluster: tRNA dihydrouridine synthase Dus1; n=1;... 41 0.033
UniRef50_A7TKM4 Cluster: Putative uncharacterized protein; n=1; ... 40 0.058
UniRef50_A5K1E0 Cluster: tRNA-dihydrouridine synthase, putative;... 40 0.076
UniRef50_Q4UGK9 Cluster: Putative uncharacterized protein; n=2; ... 37 0.41
UniRef50_Q4YBL9 Cluster: Putative uncharacterized protein; n=5; ... 37 0.54
UniRef50_Q4QGZ0 Cluster: Putative uncharacterized protein; n=3; ... 37 0.54
UniRef50_Q4D174 Cluster: Dihydrouridine synthase (Dus), putative... 36 0.71
UniRef50_A0BRF2 Cluster: Chromosome undetermined scaffold_122, w... 36 0.71
UniRef50_UPI00006CBDCB Cluster: hypothetical protein TTHERM_0031... 36 1.2
UniRef50_Q2R2M4 Cluster: BSD domain containing protein, expresse... 36 1.2
UniRef50_Q54GH2 Cluster: Putative basic-leucine zipper (BZIP) tr... 36 1.2
UniRef50_A7AQM0 Cluster: Dihydrouridine synthase, putative; n=1;... 36 1.2
UniRef50_Q8I647 Cluster: Putative uncharacterized protein PFB097... 35 1.6
UniRef50_A3LS04 Cluster: [Hydroxymethylglutaryl-CoA reductase(NA... 35 1.6
UniRef50_A2F0T9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_A2DW68 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_Q8IAZ5 Cluster: Putative uncharacterized protein MAL8P1... 34 2.9
UniRef50_UPI0001509DCA Cluster: hypothetical protein TTHERM_0013... 34 3.8
UniRef50_A0D4S6 Cluster: Chromosome undetermined scaffold_38, wh... 34 3.8
UniRef50_A7NUB4 Cluster: Chromosome chr18 scaffold_1, whole geno... 33 5.0
UniRef50_Q689C5 Cluster: PFC0325c protein; n=4; cellular organis... 33 5.0
UniRef50_Q57V78 Cluster: TRNA-dihydrouridine synthase 1, putativ... 33 5.0
UniRef50_A0LZC3 Cluster: Two-component system sensor histidine k... 33 6.6
UniRef50_Q8ID34 Cluster: Putative uncharacterized protein PF13_0... 33 6.6
UniRef50_Q5JEQ9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_UPI00006CDD6A Cluster: hypothetical protein TTHERM_0029... 33 8.8
>UniRef50_Q9VPM1 Cluster: CG3645-PA, isoform A; n=2; Diptera|Rep:
CG3645-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 505
Score = 171 bits (417), Expect = 1e-41
Identities = 86/222 (38%), Positives = 127/222 (57%), Gaps = 2/222 (0%)
Frame = -3
Query: 692 GINPVTWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDF 513
G++P W++A EYLELV +PCPSS++RGHLFK+FH I +N++ RQ LATA + F
Sbjct: 253 GVSPPVWQMAHEYLELVQLHPCPSSFIRGHLFKLFHHIMNIRQNSELRQYLATANQLVQF 312
Query: 512 KKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILPPWICQPYVRMSPEAHTQKMHE-L 336
+ V + ++ KY+P+ +G++ YE E+ + + +L L PW+CQPY+R SPE+H QK+ E +
Sbjct: 313 QAVVQQVRAKYEPFHKGEVPYEPEQMAAGSEEDLPLSPWLCQPYIRASPESHRQKIAEKV 372
Query: 335 SKNQNNQECKRINEDQDGNHISXXXXXXXXXXXXRPQKAD-QNQNGRNGDICFNDKCPNP 159
+ ++ KR D+DG IS RP K + Q Q+ + + +C NP
Sbjct: 373 REAEDPNRTKRQYFDKDGKEISRKRMKKLRRRQRRPNKTEAQIQHRHERRLEYCSECANP 432
Query: 158 LGGXXXXXXXXXXXXXXCYEEDLDCRGHRILVHTRREIAKLF 33
G CY D DC GH I + +RR AKLF
Sbjct: 433 QGSKCEFQLCRVCCKDRCYNNDRDCPGHGIFIKSRRARAKLF 474
>UniRef50_Q6P1R4 Cluster: tRNA-dihydrouridine synthase 1-like; n=20;
Euteleostomi|Rep: tRNA-dihydrouridine synthase 1-like -
Homo sapiens (Human)
Length = 473
Score = 87.0 bits (206), Expect = 4e-16
Identities = 67/216 (31%), Positives = 90/216 (41%), Gaps = 1/216 (0%)
Frame = -3
Query: 692 GINPVTWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDF 513
G +P WELAEEYL++V +PCP SYVR HLFK++H T + + R+ LA + +
Sbjct: 244 GRSPAVWELAEEYLDIVREHPCPLSYVRAHLFKLWH--HTLQVHQELREELAKVKTLEGI 301
Query: 512 KKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILP-PWICQPYVRMSPEAHTQKMHEL 336
V + LK + Q +E TG LP WICQPY+R P E
Sbjct: 302 AAVSQELKLRCQE------EISRQEGAKPTG---DLPFHWICQPYIRPGP-------REG 345
Query: 335 SKNQNNQECKRINEDQDGNHISXXXXXXXXXXXXRPQKADQNQNGRNGDICFNDKCPNPL 156
SK + KR E+++G P K C D+C NP
Sbjct: 346 SKEKAGARSKRALEEEEGG-TEVLSKNKQKKQLRNPHKTFDPSLKPKYAKC--DQCGNPK 402
Query: 155 GGXXXXXXXXXXXXXXCYEEDLDCRGHRILVHTRRE 48
G +E DC GH +L T+ E
Sbjct: 403 GNRCVFSLCRGCCKKRASKETADCPGHGLLFKTKLE 438
>UniRef50_UPI0000586CAD Cluster: PREDICTED: similar to Dus1l
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Dus1l protein - Strongylocentrotus
purpuratus
Length = 291
Score = 79.8 bits (188), Expect = 6e-14
Identities = 63/214 (29%), Positives = 92/214 (42%)
Frame = -3
Query: 692 GINPVTWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDF 513
G +P W++ +EY++LV YP P S VR HLFKI H + + D R LA A++I D
Sbjct: 48 GTHPKVWDITDEYIDLVKTYPTPLSAVRAHLFKILH--HSLMVHIDLRIDLARAKSIGDC 105
Query: 512 KKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILPPWICQPYVRMSPEAHTQKMHELS 333
+++C+ L+ + E D G LP W+CQPY R SP+ K E
Sbjct: 106 EEICKTLRGRC----EEDAAKPDAPTKPEDGK---LPHWLCQPYFRPSPKEAEAKRAE-- 156
Query: 332 KNQNNQECKRINEDQDGNHISXXXXXXXXXXXXRPQKADQNQNGRNGDICFNDKCPNPLG 153
KN+ + I +D + +S P R + C KCPNP G
Sbjct: 157 KNR-KRPLSMIIDDLNNEGLS---KSQIKKRVRNPSVIFHRPAVRQYEKC--AKCPNPRG 210
Query: 152 GXXXXXXXXXXXXXXCYEEDLDCRGHRILVHTRR 51
++ DC GH +L T++
Sbjct: 211 LKCVFSECRACCKHTAHKAVADCPGHHLLFATKK 244
>UniRef50_Q4S086 Cluster: Chromosome undetermined SCAF14784, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14784,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 505
Score = 77.4 bits (182), Expect = 3e-13
Identities = 53/138 (38%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Frame = -3
Query: 692 GINPVTWELAEEYLELVYRY-PCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNIND 516
G +P WE+AEEYLE+V ++ PC SYVR HLFK++H T + D R+ LA + ++
Sbjct: 257 GRSPPVWEMAEEYLEVVRKHPPCSLSYVRAHLFKLWH--HTLQIHQDLREDLAKVKTLDG 314
Query: 515 FKKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILPPWICQPYVRMSPEAHTQKMHEL 336
V + LK Q QE D E ++G +L P WICQPYVR P+
Sbjct: 315 LADVSKQLK---QRCQEEIASGADAE---KSG-DLPFPHWICQPYVRPLPKEPLANGDSQ 367
Query: 335 SKNQNNQEC-KRINEDQD 285
+ C KR ED D
Sbjct: 368 ASEAKKTLCQKRALEDSD 385
>UniRef50_Q9XVN8 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 527
Score = 50.0 bits (114), Expect = 5e-05
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Frame = -3
Query: 677 TWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCE 498
TW++A EYLE ++ +S +R H+F+I H + E D R ++ I DF+ + E
Sbjct: 307 TWKIAAEYLEYAKKFNAGTSAIRAHVFRICH--HSLLEYEDLRMRVSLEHRIEDFENIVE 364
Query: 497 NLKNKYQPYQEGKIHYEDE-----ENISRTG--YNLI----LPPWICQPYVRMSPEAHTQ 351
L + + E + E E ENI R G N I P WI +PY R+ A
Sbjct: 365 ELAKRAKSDAEAGKNREVEARTLFENI-RNGILMNAIEVSKQPHWISKPYFRLKEVAKES 423
Query: 350 KMHELSKNQNNQECKRI 300
+ E K ++ +++
Sbjct: 424 IVGEGEKTFREKQKEKL 440
>UniRef50_Q5CSA9 Cluster: Dus1p, tRNA dihydrouridine synthase; n=2;
Cryptosporidium|Rep: Dus1p, tRNA dihydrouridine synthase
- Cryptosporidium parvum Iowa II
Length = 409
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = -3
Query: 683 PVTWELAEEYLELVYRYPCPS-SYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKK 507
P +++A EYL+ YP P+ +R HL++IFH IF+ + R + + +++F+
Sbjct: 258 PSQFQIALEYLDYCILYPPPNVGIIRTHLYRIFHTIFSLPGAHIFRDEINNSHQVHEFQL 317
Query: 506 VCENLKNKY 480
+NL+N Y
Sbjct: 318 FVQNLENFY 326
>UniRef50_Q55BV8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1547
Score = 41.9 bits (94), Expect = 0.014
Identities = 29/103 (28%), Positives = 49/103 (47%)
Frame = -3
Query: 623 SSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCENLKNKYQPYQEGKIHYED 444
S Y+ LF F + NN++ L+AT +FK + N K+K P Q+ + +D
Sbjct: 1331 SKYITDALFLSFDN--NKNNNNNNNNLIATVDKYGNFKILNLNQKHKLLPLQQQQQQQQD 1388
Query: 443 EENISRTGYNLILPPWICQPYVRMSPEAHTQKMHELSKNQNNQ 315
E+I N +P I P V+ S + K+++L +N+
Sbjct: 1389 GEDIVPPIVNNFMPV-ILDPVVQFSLKETCMKLYQLKSPLSNK 1430
>UniRef50_Q9HGN6 Cluster: tRNA dihydrouridine synthase Dus1; n=1;
Schizosaccharomyces pombe|Rep: tRNA dihydrouridine
synthase Dus1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 399
Score = 40.7 bits (91), Expect = 0.033
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Frame = -3
Query: 671 ELAEEYLELVYRYPCPSSY-----VRGHLFKIFHKIFTFDENNDDRQLLA---TAQNIND 516
++ EEYL ++ + S Y ++GHLFK+ + + + D R LA T ++
Sbjct: 261 DMCEEYLNIIREFKLESDYSSLSAIKGHLFKLMRPLLSI--HTDIRSKLAQGCTPRDFET 318
Query: 515 FKKVCENLKNKYQPYQE-GKIHYEDE--ENISRTGYNLILPPWICQPYVR 375
F V L+ + +E G+I+ + + E++ + ++P W QPY+R
Sbjct: 319 FPPVVAMLRKRLLECEEKGEINEDKDVKESVKDSMGYPVIPWWRVQPYIR 368
>UniRef50_A7TKM4 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 416
Score = 39.9 bits (89), Expect = 0.058
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Frame = -3
Query: 566 ENNDDRQLLATAQNINDFKKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILPPWICQ 387
ENN R+ ++ Q + K++ N+KNK Q+ +I+ + + YN+ILP Q
Sbjct: 83 ENNASRRDKSSIQRV---KEIYNNIKNK--SIQDDEIYQVISSVVKKDLYNIILPSKNTQ 137
Query: 386 P---YVRMSPEAHTQKMHELSKNQNNQECKRINEDQDGNHISXXXXXXXXXXXXRPQKAD 216
+++ P++ K+H S + N + +QDG+ +S K +
Sbjct: 138 SKKDHIKTKPKSADLKIHMSSHGKLNNIIDELKINQDGSGLSKNIGDPYDLNTKLDMKLE 197
Query: 215 QNQN 204
N+N
Sbjct: 198 ANEN 201
>UniRef50_A5K1E0 Cluster: tRNA-dihydrouridine synthase, putative;
n=5; Plasmodium|Rep: tRNA-dihydrouridine synthase,
putative - Plasmodium vivax
Length = 340
Score = 39.5 bits (88), Expect = 0.076
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = -3
Query: 686 NPVTWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDF 513
N T ++ EY +L +Y + Y++GHLFK+ +K F + D R +L +++D+
Sbjct: 254 NVHTVDVVNEYYDLFLQYESNTKYLKGHLFKMLYKY--FQVHTDLRDMLNNCHSLDDY 309
>UniRef50_Q4UGK9 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 359
Score = 37.1 bits (82), Expect = 0.41
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = -3
Query: 671 ELAEEYLELVYRYPCPS-SYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCEN 495
++ EEYL ++ P S ++GH FKI +K ++++D R ++ A I F+ V +
Sbjct: 248 DIFEEYLSILKGSPRQKISCIKGHAFKILYKY--INQHHDIRTAISNANTIKKFENVVYD 305
Query: 494 LKN 486
L+N
Sbjct: 306 LRN 308
>UniRef50_Q4YBL9 Cluster: Putative uncharacterized protein; n=5;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 1958
Score = 36.7 bits (81), Expect = 0.54
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = -3
Query: 569 DENNDDRQLLATAQNINDFKKVCENLK-NKYQPYQEGKIHYEDEENISRTGYNLILPPWI 393
D +D LLA +ND K EN K K Y E KI+YE + +N+ LPP
Sbjct: 652 DMRDDIDILLANIDKLNDEKNATENEKEQKELKYNELKINYEHKVKECNKFFNM-LPP-- 708
Query: 392 CQPYVRMSPEAHTQKMHELSKNQNNQECKRINEDQDGNHIS 270
+M + +K H SK + N + N+ ++G S
Sbjct: 709 -----KMKKKIEYEKKHRNSK-EGNINMSQFNKGKNGKRTS 743
>UniRef50_Q4QGZ0 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1012
Score = 36.7 bits (81), Expect = 0.54
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = -3
Query: 686 NPVTWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKK 507
+P T +Y E+ RYP P + H FDE++DD Q AQN D ++
Sbjct: 208 SPSTEAWEAKYREVYARYPLPVA----HAAASSADSHNFDEDDDDTQPEVHAQNNEDLQE 263
Query: 506 VCENLKNKYQPY 471
CE L Y+ +
Sbjct: 264 FCEKLGIAYETH 275
>UniRef50_Q4D174 Cluster: Dihydrouridine synthase (Dus), putative;
n=2; Trypanosoma cruzi|Rep: Dihydrouridine synthase
(Dus), putative - Trypanosoma cruzi
Length = 548
Score = 36.3 bits (80), Expect = 0.71
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = -3
Query: 665 AEEYLELVYRYPCPSSYVRGHLFK-IFH 585
A+EYL+ V RYP ++V+ HLFK +FH
Sbjct: 374 AQEYLQFVQRYPVDLAFVKAHLFKMLFH 401
>UniRef50_A0BRF2 Cluster: Chromosome undetermined scaffold_122,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_122,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 269
Score = 36.3 bits (80), Expect = 0.71
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Frame = -3
Query: 524 INDFKKVCENLKNKYQPYQEGKIHYEDEE----NISRTG--YNLILPPWICQPYVRMSPE 363
I+ ++++ + + KYQ QE ++ Y+DEE +S T Y + P I ++M
Sbjct: 17 ISTYEELIQEILQKYQTIQEIELSYQDEEGDIIQVSNTSDLYAINEPDKIT---IQMKAR 73
Query: 362 AHTQKMHELSKNQNNQE--CKRINEDQ 288
QK EL K + QE K+I E Q
Sbjct: 74 QDEQKQQELEKEKKRQEIKLKKIKEQQ 100
>UniRef50_UPI00006CBDCB Cluster: hypothetical protein TTHERM_00316510;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00316510 - Tetrahymena thermophila SB210
Length = 3459
Score = 35.5 bits (78), Expect = 1.2
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Frame = -3
Query: 560 NDDRQLLATAQNINDFKKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILPPWICQPY 381
++D +L ++ QN ND +N KN Q Q + + NI++ N I QP
Sbjct: 2813 DNDNKLKSSQQNHNDI----QNSKNLQQGQQSSNL--QQNSNITQ---NKIQQD---QPS 2860
Query: 380 VRMSPEAHTQKMHELSKNQNNQECKRIN-EDQDGNHISXXXXXXXXXXXXRPQKADQNQN 204
+ +A TQK E + Q+ N EDQ N + Q ++NQN
Sbjct: 2861 QSIQSQAQTQKEKETEAAKKQQQSNPPNLEDQKQNQVQGKVVLENDSKLKSQQNQNENQN 2920
Query: 203 GRN 195
+N
Sbjct: 2921 SKN 2923
>UniRef50_Q2R2M4 Cluster: BSD domain containing protein, expressed;
n=5; Oryza sativa|Rep: BSD domain containing protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 430
Score = 35.5 bits (78), Expect = 1.2
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = -3
Query: 689 INPVTWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFK 510
+ V ELA+ +EL CPS G +KI+ + + DD LL+T Q + K
Sbjct: 170 VESVAPELADLRIEL-----CPSHMSEGCFWKIYFVLLHPKLSKDDADLLSTPQILEARK 224
Query: 509 KVCENLKNKYQP 474
K+ NL+++ +P
Sbjct: 225 KLSRNLQSESKP 236
>UniRef50_Q54GH2 Cluster: Putative basic-leucine zipper (BZIP)
transcription factor; n=1; Dictyostelium discoideum
AX4|Rep: Putative basic-leucine zipper (BZIP)
transcription factor - Dictyostelium discoideum AX4
Length = 897
Score = 35.5 bits (78), Expect = 1.2
Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
Frame = -3
Query: 569 DENNDDRQLLATAQNINDFKKVCEN-LKNKYQPYQEGKIHYEDEENISRTGYNLILPPWI 393
+ N++D Q L Q+I + C+ ++ + Q YQ+ YED+ + Y
Sbjct: 87 ETNSNDPQYLERLQSIQQQQHQCQTQIQQQLQNYQQ---QYEDQYQQRQQQYQ----DQY 139
Query: 392 CQPYVRMSPEAHTQKMHELSKNQNNQECKRINEDQDGNHISXXXXXXXXXXXXRPQK-AD 216
+PY SP + + ++ N NN N + + N S ++
Sbjct: 140 QKPY--SSPPLNFNSIPPITNNNNNNNNNNNNNNNNNNSNSNSNSNSNSNSNSNSNSNSN 197
Query: 215 QNQNGRNGDICFND 174
N N N +IC N+
Sbjct: 198 SNNNNINNNICINN 211
>UniRef50_A7AQM0 Cluster: Dihydrouridine synthase, putative; n=1;
Babesia bovis|Rep: Dihydrouridine synthase, putative -
Babesia bovis
Length = 355
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 671 ELAEEYLELVYRYPCPS-SYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCEN 495
++ +EYL +V RYP S +RGH FKI + + + R L A +++DF V
Sbjct: 246 DIMDEYLGIVRRYPDQSPCCIRGHAFKILFQ--HCQRHPEIRNRLTDAMSLDDFSSVVSY 303
Query: 494 LK 489
L+
Sbjct: 304 LR 305
>UniRef50_Q8I647 Cluster: Putative uncharacterized protein PFB0976w;
n=2; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0976w - Plasmodium falciparum
(isolate 3D7)
Length = 66
Score = 35.1 bits (77), Expect = 1.6
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 77 DLYNPSLLRNTYFYNIFYIICMYIYRPED*DIYH*NKYLHFAHS 208
DL++PS + + IF+I +Y+++ D DIYH ++H HS
Sbjct: 18 DLHHPSSFPMAFLFQIFFID-LYLFQYMDDDIYHHPYHIHVYHS 60
>UniRef50_A3LS04 Cluster: [Hydroxymethylglutaryl-CoA
reductase(NADPH)] kinase KIN2; n=1; Pichia stipitis|Rep:
[Hydroxymethylglutaryl-CoA reductase(NADPH)] kinase KIN2
- Pichia stipitis (Yeast)
Length = 1174
Score = 35.1 bits (77), Expect = 1.6
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -3
Query: 410 ILPPW-ICQPYVRMSPEAHTQKMHELSKNQNNQECK-RINEDQDGNHISXXXXXXXXXXX 237
+LPP I P R SP+ TQ+ ++NQ Q+ + + GNH +
Sbjct: 84 LLPPASIASPSTRESPKGQTQQQSNQNQNQQGQQNQGHSRHEHHGNHHTAQQSHSSQHHQ 143
Query: 236 XRPQKADQNQNGRNGDICFNDK 171
+PQ Q+Q+ F+ K
Sbjct: 144 QQPQSQSQSQSQSQSQQQFHRK 165
>UniRef50_A2F0T9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2781
Score = 34.7 bits (76), Expect = 2.2
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Frame = -3
Query: 602 LFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCENLKNKYQPYQEGKIHY--EDEENIS 429
+F I +F+ NDD ++ +ND +KV N+ + +++ I+ E ++S
Sbjct: 1025 MFAIISNEISFNMRNDDISVVLNNLLMNDKQKVTVGKLNQLK-FEDNTIYILGETHFDLS 1083
Query: 428 RTGYNLILPPWICQP-YVRMSP---EAHTQKMHELSKNQNNQECKRINE 294
+G+ +LP ++ P + SP E QK+ E+S N+N+ K + +
Sbjct: 1084 NSGFGYLLPIFVKDPVHFLKSPQQKEKTPQKVTEVS-NENSTPIKLVTD 1131
>UniRef50_A2DW68 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 979
Score = 34.7 bits (76), Expect = 2.2
Identities = 24/126 (19%), Positives = 51/126 (40%)
Frame = -3
Query: 566 ENNDDRQLLATAQNINDFKKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILPPWICQ 387
+ N+D + +D + V N ++K Q + + + ++ G + +P ++
Sbjct: 322 KTNEDESFDPEFPSPSDKQYVDSNTQSKSQISNKNENEISYTSSTAQDGEKMPIPRFLSG 381
Query: 386 PYVRMSPEAHTQKMHELSKNQNNQECKRINEDQDGNHISXXXXXXXXXXXXRPQKADQNQ 207
R + T S+ QN++E R++ + + +H+S Q + Q
Sbjct: 382 QLNRTKTDFETATSQSQSQAQNSEERSRVSNENENSHLSQGSRASRNASNS--QIGNSKQ 439
Query: 206 NGRNGD 189
N RN D
Sbjct: 440 NSRNLD 445
>UniRef50_Q8IAZ5 Cluster: Putative uncharacterized protein
MAL8P1.82; n=4; Plasmodium|Rep: Putative uncharacterized
protein MAL8P1.82 - Plasmodium falciparum (isolate 3D7)
Length = 1833
Score = 34.3 bits (75), Expect = 2.9
Identities = 23/99 (23%), Positives = 40/99 (40%)
Frame = -3
Query: 569 DENNDDRQLLATAQNINDFKKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILPPWIC 390
+ NN++ + + NIN +C N+ + Y K +D +I R G N
Sbjct: 104 NNNNNNNNINNNSSNINP--NICNNINRSKEKYDNIKYFIDDPVDIIRKGENQYCD---T 158
Query: 389 QPYVRMSPEAHTQKMHELSKNQNNQECKRINEDQDGNHI 273
Q + + +L + N Q K+ +D D N+I
Sbjct: 159 QNVSKKKKKDKMNSSFDLWETNNKQNDKKYVDDNDNNNI 197
>UniRef50_UPI0001509DCA Cluster: hypothetical protein
TTHERM_00138470; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00138470 - Tetrahymena
thermophila SB210
Length = 728
Score = 33.9 bits (74), Expect = 3.8
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = -3
Query: 596 KIFHKIFTFDENNDDRQLLATAQNINDFKKVCENLKNKYQPYQEGKIHYEDEENISRTGY 417
K+ + F ENN + Q AQN N KK EN +N++ +++ K H + N Y
Sbjct: 489 KLCKQDFVKQENNLNEQ--DKAQNFNFVKKE-ENNQNQFLEFKQ-KNHKISKNNFHNHQY 544
Query: 416 N--LILPPWICQPYVRMSPEAHTQKMHELSK 330
LPP + YV+ E + QK E S+
Sbjct: 545 GNESELPPKFSEIYVKQIDEQYDQKFFESSE 575
>UniRef50_A0D4S6 Cluster: Chromosome undetermined scaffold_38, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_38,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 265
Score = 33.9 bits (74), Expect = 3.8
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -3
Query: 494 LKNKYQPYQEGKIHYEDEENISRTGYNLILPPWICQPYVRMSPEAHTQKMHELSKNQNNQ 315
+ N+ Q Y+ K Y++EE I GY+ I W C+ + H+Q+ + ++K + N
Sbjct: 11 IANRPQIYRLSKGKYKEEELIDAGGYSQI---WKCEGFAIKRMLIHSQETYLMAKQEINI 67
Query: 314 ECKRINE 294
KR+ E
Sbjct: 68 MKKRLPE 74
>UniRef50_A7NUB4 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 381
Score = 33.5 bits (73), Expect = 5.0
Identities = 25/117 (21%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Frame = -3
Query: 629 CPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCENLKNKYQPYQE-GKIH 453
CPS +G+ +KI+ + N D +LL+T Q + + L+ K +P + +H
Sbjct: 197 CPSHMSKGYFWKIYFVLLHSRLNRQDAELLSTPQIVAARAMWMQELQKKTKPEPDCTSLH 256
Query: 452 YEDEENISRT-GYNLILPPWICQPY-VRMSPEAHTQKMHELSKNQNNQECKRINEDQ 288
ED + + + N+ + +P ++ + T+K + L+ +++ K + E++
Sbjct: 257 QEDSASTNNSHSENMPFRTFALEPVSFPVTTDLETEK-YTLANSESQISDKSVIEEK 312
>UniRef50_Q689C5 Cluster: PFC0325c protein; n=4; cellular
organisms|Rep: PFC0325c protein - Plasmodium falciparum
Length = 528
Score = 33.5 bits (73), Expect = 5.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -3
Query: 572 FDENNDDRQLLATAQ-NINDFKKVCENLKNKYQPYQEGKIH-YEDEENISRTGY 417
F ENNDD++ A+ + ND K + ++Y + H Y+DEEN+ ++ Y
Sbjct: 384 FMENNDDKENEPYAEVHYNDDKYIDNQYDDRYYNGNRDQYHFYDDEENVHKSKY 437
>UniRef50_Q57V78 Cluster: TRNA-dihydrouridine synthase 1, putative;
n=1; Trypanosoma brucei|Rep: TRNA-dihydrouridine
synthase 1, putative - Trypanosoma brucei
Length = 520
Score = 33.5 bits (73), Expect = 5.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 665 AEEYLELVYRYPCPSSYVRGHLFKIFH 585
A EYLELV R+P +V+ H FK+ +
Sbjct: 373 ASEYLELVRRFPVDIGFVKAHFFKMLY 399
>UniRef50_A0LZC3 Cluster: Two-component system sensor histidine
kinase; n=1; Gramella forsetii KT0803|Rep: Two-component
system sensor histidine kinase - Gramella forsetii
(strain KT0803)
Length = 370
Score = 33.1 bits (72), Expect = 6.6
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 323 SDFYLARAFSVYVLLVTFSHKVDISMVVKLNCTLSWIYFLHLHNVFSLLDKVDIYFL-DF 499
S+F + YV++V++ + IS LN W+ + +H +FS+L + I + DF
Sbjct: 53 SEFLVHNLLFDYVIVVSYMTLIAISTKRFLNKNYPWVKIISIHTLFSILIGLIIRLIFDF 112
Query: 500 HKLS*SHL 523
+ + H+
Sbjct: 113 YSIIAGHI 120
>UniRef50_Q8ID34 Cluster: Putative uncharacterized protein PF13_0352;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF13_0352 - Plasmodium falciparum
(isolate 3D7)
Length = 1046
Score = 33.1 bits (72), Expect = 6.6
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = -1
Query: 208 RMGEMEIFVSMINVLILWAVNVHTNYVKNVVKISVTKKTWIVEVTGYLFILEEKL 44
++G+ I ++++ LI +NV+ NY+KN +K+ +KT + ++ +KL
Sbjct: 845 KLGDDNIKKNILDSLIQNDINVYNNYIKNFMKLKEYQKTKTLSTNNKKYLKAKKL 899
>UniRef50_Q5JEQ9 Cluster: Putative uncharacterized protein; n=1;
Thermococcus kodakarensis KOD1|Rep: Putative
uncharacterized protein - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 788
Score = 33.1 bits (72), Expect = 6.6
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = -3
Query: 473 YQEGKIHYEDEENISRTGYNLILPPWICQPYVRMSPEAHTQKMHELSKNQNNQECKRINE 294
Y ++H DE+ + G +LIL + Y+ E + + E+ K + Q K + E
Sbjct: 90 YVYRRLHSVDEKTAKQVGRDLILLGQKIEEYLTGKVEVFSDFVFEVEKIRKGQPTKAVRE 149
Query: 293 DQDGNH 276
D NH
Sbjct: 150 PADRNH 155
>UniRef50_UPI00006CDD6A Cluster: hypothetical protein
TTHERM_00294520; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00294520 - Tetrahymena
thermophila SB210
Length = 964
Score = 32.7 bits (71), Expect = 8.8
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = -3
Query: 590 FHKIFTFDENNDDRQLLATAQNINDFKKVCENLKNKYQPYQEGKIHYEDEENIS 429
F+K+FT D + D+ A + N+ + K N KN+ + KI+++D E+++
Sbjct: 474 FYKVFTKDNEDSDKPEFAQSINLQEIK----NSKNESDLMNQYKINFQDYEDLN 523
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,599,128
Number of Sequences: 1657284
Number of extensions: 11618704
Number of successful extensions: 36523
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 34250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36468
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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