Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c20r
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.0  
EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        23   6.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.1  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
 Frame = -3

Query: 587  HKIFTFDENNDDRQLLATAQNINDFKKVCEN------LKNKYQPYQEGKIHYEDEENISR 426
            H++ T + +  D+Q     Q + +++++ +N      L N ++  +E    +    N SR
Sbjct: 3188 HEVSTLEHSQIDKQFHDLKQTVQEYRQLADNRNSGNWLDNIFKDIEEDFNVFLSTVNHSR 3247

Query: 425  TGYNLILPPWICQPYVRMSPEAHTQKMHELSKNQNNQECKRINEDQDGNH 276
            T Y       +C+    +S E   +  H L     +   + +N  + G H
Sbjct: 3248 TFYY-----QLCERIAALSDELE-ESRHILQHKLYSNNSQSLNNFKFGLH 3291


>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
 Frame = -2

Query: 426 DRVQFNFTTMD---MSTLCENVTRSTYTE 349
           +RV FN T      ++T CE VTR   TE
Sbjct: 152 ERVSFNGTKATAERINTWCEKVTRGRITE 180


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
 Frame = -3

Query: 587  HKIFTFDENNDDRQLLATAQNINDFKKVCEN------LKNKYQPYQEGKIHYEDEENISR 426
            H++ T + +  D+Q     Q + +++++ +N      L N ++  +E    +    N SR
Sbjct: 3191 HEVSTLEHSQIDKQFHDLKQTVQEYRQLADNRNSGNWLDNIFKDIKEDFNVFLSTVNPSR 3250

Query: 425  TGY 417
            T Y
Sbjct: 3251 TFY 3253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,780
Number of Sequences: 2352
Number of extensions: 12769
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)