Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c20r
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064918-1|AAH64918.1| 473|Homo sapiens dihydrouridine synthase... 87 6e-17
BC062566-1|AAH62566.1| 473|Homo sapiens DUS1L protein protein. 87 6e-17
BC017081-1|AAH17081.4| 406|Homo sapiens DUS1L protein protein. 87 6e-17
BC003659-1|AAH03659.2| 299|Homo sapiens DUS1L protein protein. 79 1e-14
BC004435-1|AAH04435.1| 277|Homo sapiens cyclin B1 interacting p... 31 3.9
BC001218-1|AAH01218.1| 277|Homo sapiens cyclin B1 interacting p... 31 3.9
BC000369-1|AAH00369.1| 277|Homo sapiens cyclin B1 interacting p... 31 3.9
AK026233-1|BAB15403.1| 277|Homo sapiens protein ( Homo sapiens ... 31 3.9
AF216381-1|AAF36386.1| 277|Homo sapiens enhancer of invasion 10... 31 3.9
>BC064918-1|AAH64918.1| 473|Homo sapiens dihydrouridine synthase
1-like (S. cerevisiae) protein.
Length = 473
Score = 87.0 bits (206), Expect = 6e-17
Identities = 67/216 (31%), Positives = 90/216 (41%), Gaps = 1/216 (0%)
Frame = -3
Query: 692 GINPVTWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDF 513
G +P WELAEEYL++V +PCP SYVR HLFK++H T + + R+ LA + +
Sbjct: 244 GRSPAVWELAEEYLDIVREHPCPLSYVRAHLFKLWH--HTLQVHQELREELAKVKTLEGI 301
Query: 512 KKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILP-PWICQPYVRMSPEAHTQKMHEL 336
V + LK + Q +E TG LP WICQPY+R P E
Sbjct: 302 AAVSQELKLRCQE------EISRQEGAKPTG---DLPFHWICQPYIRPGP-------REG 345
Query: 335 SKNQNNQECKRINEDQDGNHISXXXXXXXXXXXXRPQKADQNQNGRNGDICFNDKCPNPL 156
SK + KR E+++G P K C D+C NP
Sbjct: 346 SKEKAGARSKRALEEEEGG-TEVLSKNKQKKQLRNPHKTFDPSLKPKYAKC--DQCGNPK 402
Query: 155 GGXXXXXXXXXXXXXXCYEEDLDCRGHRILVHTRRE 48
G +E DC GH +L T+ E
Sbjct: 403 GNRCVFSLCRGCCKKRASKETADCPGHGLLFKTKLE 438
>BC062566-1|AAH62566.1| 473|Homo sapiens DUS1L protein protein.
Length = 473
Score = 87.0 bits (206), Expect = 6e-17
Identities = 67/216 (31%), Positives = 90/216 (41%), Gaps = 1/216 (0%)
Frame = -3
Query: 692 GINPVTWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDF 513
G +P WELAEEYL++V +PCP SYVR HLFK++H T + + R+ LA + +
Sbjct: 244 GRSPAVWELAEEYLDIVREHPCPLSYVRAHLFKLWH--HTLQVHQELREELAKVKTLEGI 301
Query: 512 KKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILP-PWICQPYVRMSPEAHTQKMHEL 336
V + LK + Q +E TG LP WICQPY+R P E
Sbjct: 302 AAVSQELKLRCQE------EISRQEGAKPTG---DLPFHWICQPYIRPGP-------REG 345
Query: 335 SKNQNNQECKRINEDQDGNHISXXXXXXXXXXXXRPQKADQNQNGRNGDICFNDKCPNPL 156
SK + KR E+++G P K C D+C NP
Sbjct: 346 SKEKAGARSKRALEEEEGG-TEVLSKNKQKKQLRNPHKTFDPSLKPKYAKC--DQCGNPK 402
Query: 155 GGXXXXXXXXXXXXXXCYEEDLDCRGHRILVHTRRE 48
G +E DC GH +L T+ E
Sbjct: 403 GNRCVFSLCRGCCKKRASKETADCPGHGLLFKTKLE 438
>BC017081-1|AAH17081.4| 406|Homo sapiens DUS1L protein protein.
Length = 406
Score = 87.0 bits (206), Expect = 6e-17
Identities = 67/216 (31%), Positives = 90/216 (41%), Gaps = 1/216 (0%)
Frame = -3
Query: 692 GINPVTWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDF 513
G +P WELAEEYL++V +PCP SYVR HLFK++H T + + R+ LA + +
Sbjct: 177 GRSPAVWELAEEYLDIVREHPCPLSYVRAHLFKLWH--HTLQVHQELREELAKVKTLEGI 234
Query: 512 KKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILP-PWICQPYVRMSPEAHTQKMHEL 336
V + LK + Q +E TG LP WICQPY+R P E
Sbjct: 235 AAVSQELKLRCQE------EISRQEGAKPTG---DLPFHWICQPYIRPGP-------REG 278
Query: 335 SKNQNNQECKRINEDQDGNHISXXXXXXXXXXXXRPQKADQNQNGRNGDICFNDKCPNPL 156
SK + KR E+++G P K C D+C NP
Sbjct: 279 SKEKAGARSKRALEEEEGG-TEVLSKNKQKKQLRNPHKTFDPSLKPKYAKC--DQCGNPK 335
Query: 155 GGXXXXXXXXXXXXXXCYEEDLDCRGHRILVHTRRE 48
G +E DC GH +L T+ E
Sbjct: 336 GNRCVFSLCRGCCKKRASKETADCPGHGLLFKTKLE 371
>BC003659-1|AAH03659.2| 299|Homo sapiens DUS1L protein protein.
Length = 299
Score = 79.4 bits (187), Expect = 1e-14
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = -3
Query: 692 GINPVTWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDF 513
G +P WELAEEYL++V +PCP SYVR HLFK++H T + + R+ LA + +
Sbjct: 113 GRSPAVWELAEEYLDIVREHPCPLSYVRAHLFKLWH--HTLQVHQELREELAKVKTLEGI 170
Query: 512 KKVCENLKNKYQPYQEGKIHYEDEENISRTGYNLILP-PWICQPYVRMSPEAHTQKMHEL 336
V + LK + Q +E TG LP WICQPY+R P E
Sbjct: 171 AAVSQELKLRCQE------EISRQEGAKPTG---DLPFHWICQPYIRPGP-------REG 214
Query: 335 SKNQNNQECKRINEDQDG 282
SK + KR E+++G
Sbjct: 215 SKEKAGARSKRALEEEEG 232
>BC004435-1|AAH04435.1| 277|Homo sapiens cyclin B1 interacting
protein 1 protein.
Length = 277
Score = 31.1 bits (67), Expect = 3.9
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = -3
Query: 677 TWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCE 498
T+++ +E L Y + S GHL K KI+T + D +L + + KKV E
Sbjct: 97 TYQVHQERLYQEYNF----SKAEGHL-KQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLE 151
Query: 497 NLKNKYQPYQE 465
K K+ E
Sbjct: 152 EYKKKFSDISE 162
>BC001218-1|AAH01218.1| 277|Homo sapiens cyclin B1 interacting
protein 1 protein.
Length = 277
Score = 31.1 bits (67), Expect = 3.9
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = -3
Query: 677 TWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCE 498
T+++ +E L Y + S GHL K KI+T + D +L + + KKV E
Sbjct: 97 TYQVHQERLYQEYNF----SKAEGHL-KQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLE 151
Query: 497 NLKNKYQPYQE 465
K K+ E
Sbjct: 152 EYKKKFSDISE 162
>BC000369-1|AAH00369.1| 277|Homo sapiens cyclin B1 interacting
protein 1 protein.
Length = 277
Score = 31.1 bits (67), Expect = 3.9
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = -3
Query: 677 TWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCE 498
T+++ +E L Y + S GHL K KI+T + D +L + + KKV E
Sbjct: 97 TYQVHQERLYQEYNF----SKAEGHL-KQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLE 151
Query: 497 NLKNKYQPYQE 465
K K+ E
Sbjct: 152 EYKKKFSDISE 162
>AK026233-1|BAB15403.1| 277|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22580 fis, clone HSI02563. ).
Length = 277
Score = 31.1 bits (67), Expect = 3.9
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = -3
Query: 677 TWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCE 498
T+++ +E L Y + S GHL K KI+T + D +L + + KKV E
Sbjct: 97 TYQVHQERLYQEYNF----SKAEGHL-KQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLE 151
Query: 497 NLKNKYQPYQE 465
K K+ E
Sbjct: 152 EYKKKFSDISE 162
>AF216381-1|AAF36386.1| 277|Homo sapiens enhancer of invasion 10
protein.
Length = 277
Score = 31.1 bits (67), Expect = 3.9
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = -3
Query: 677 TWELAEEYLELVYRYPCPSSYVRGHLFKIFHKIFTFDENNDDRQLLATAQNINDFKKVCE 498
T+++ +E L Y + S GHL K KI+T + D +L + + KKV E
Sbjct: 97 TYQVHQERLYQEYNF----SKAEGHL-KQMEKIYTQQIQSKDVELTSMKGEVTSMKKVLE 151
Query: 497 NLKNKYQPYQE 465
K K+ E
Sbjct: 152 EYKKKFSDISE 162
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,468,559
Number of Sequences: 237096
Number of extensions: 1677689
Number of successful extensions: 3241
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3234
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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