Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c20f
         (588 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   3.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   3.3  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   4.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   7.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.7  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 302 CGNNPEIMASAAKLAEEYCDAIDINLGC 385
           CGN     AS  K   E CD I  N+ C
Sbjct: 54  CGNGLAFDASDPKFLTENCDYIH-NVDC 80


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 302 CGNNPEIMASAAKLAEEYCDAIDINLGC 385
           CGN     AS  K   E CD I  N+ C
Sbjct: 54  CGNGLAFDASDPKFLTENCDYIH-NVDC 80


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 545 WHNLLICQYLQIFSLYM*LVWKQP 474
           W+N    QYLQ  +LY  L ++ P
Sbjct: 37  WYNPYYYQYLQNAALYHKLQFRGP 60


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 566 IQMLLASWHNLLICQY 519
           +Q+L A W+ LLI  +
Sbjct: 244 VQLLRAGWNELLIAAF 259


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 86  LCNYYLRGELLFFCTIML 33
           LC+ Y    LLF+C  ++
Sbjct: 74  LCSGYFTVHLLFYCPFII 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,402
Number of Sequences: 336
Number of extensions: 2985
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)