Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c20f
         (588 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    34   0.003
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   2.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   5.5  
AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450 CY...    23   7.3  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   9.7  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 34.3 bits (75), Expect = 0.003
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
 Frame = +2

Query: 215 HSNVFTKDAKYRKDNLV-TCEEDRPLIVQFCGNNPEIMASAAKLAEEYCDAIDINLGCPQ 391
           HS +  KDAK   D    T E D PL+V+   NN  ++ + A+   +Y   + +N  C  
Sbjct: 255 HSLLLNKDAKVPYDTKYDTIEGDYPLVVK-KSNNHTVLITQARSFGKYVGRLTVNFDCEG 313

Query: 392 SIAKRGRYGSFL----QDDWELLKEI 457
            +     Y  ++    + D E+L+E+
Sbjct: 314 EVQSWEGYPIYMNNSVKQDEEVLREL 339


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 131 APMVDASEL-AWRLLCRRHGANLCYTPMLHSNV 226
           AP     +L  +R L R H +  C++P+ HSNV
Sbjct: 396 APHTPIEKLRCYRCLERGHVSRDCHSPVNHSNV 428


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 256 VFPVFSIFCKNITM*HRSVAQICTMPST 173
           +FPV    C++I   +R + Q C    T
Sbjct: 531 LFPVHKKGCRSIVSNYRGITQTCATAKT 558


>AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450
           CYP6Z1 protein.
          Length = 494

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 469 HCSHDLFQ*FPVILKKGSISSSFSNRLRTSKV 374
           +C HD    F V L+  +   SF N +RT+ V
Sbjct: 190 NCLHDPDDAFRVALRDLNNPDSFMNNIRTAGV 221


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 484 GNSLGHCSHDLFQ*FPVILKKG 419
           G   GH SHD F  FP  +K G
Sbjct: 382 GPGSGHRSHDSFVLFPRKVKVG 403


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,568
Number of Sequences: 2352
Number of extensions: 11722
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)