Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c20f
(588 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064918-1|AAH64918.1| 473|Homo sapiens dihydrouridine synthase... 244 1e-64
BC062566-1|AAH62566.1| 473|Homo sapiens DUS1L protein protein. 244 1e-64
BC017081-1|AAH17081.4| 406|Homo sapiens DUS1L protein protein. 165 8e-41
U62767-1|AAD00100.1| 307|Homo sapiens PP35 protein. 118 2e-26
BC006527-1|AAH06527.1| 493|Homo sapiens dihydrouridine synthase... 77 4e-14
AK000406-1|BAA91143.1| 493|Homo sapiens protein ( Homo sapiens ... 77 4e-14
AB101210-1|BAE07219.1| 493|Homo sapiens up-regulated in lung ca... 77 4e-14
BC003659-1|AAH03659.2| 299|Homo sapiens DUS1L protein protein. 56 9e-08
BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase... 53 7e-07
BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein. 53 7e-07
BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein. 53 7e-07
AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens ... 53 7e-07
AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein, s... 52 2e-06
AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein. 41 0.003
BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine dehyd... 40 0.005
U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine dehydro... 40 0.007
U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine dehydro... 40 0.007
BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine dehyd... 40 0.007
BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine dehyd... 40 0.007
AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine dehyd... 40 0.007
AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine dehyd... 40 0.007
BC111774-1|AAI11775.1| 196|Homo sapiens DUS4L protein protein. 38 0.020
BC012180-1|AAH12180.1| 621|Homo sapiens KIAA1279 protein. 30 7.0
AL359844-4|CAH72378.1| 621|Homo sapiens KIAA1279 protein. 30 7.0
AB033105-1|BAA86593.1| 632|Homo sapiens KIAA1279 protein protein. 30 7.0
>BC064918-1|AAH64918.1| 473|Homo sapiens dihydrouridine synthase
1-like (S. cerevisiae) protein.
Length = 473
Score = 244 bits (598), Expect = 1e-64
Identities = 106/166 (63%), Positives = 132/166 (79%), Gaps = 2/166 (1%)
Frame = +2
Query: 95 WIFELNNPQFVVAPMVDASELAWRLLCRRHGANLCYTPMLHSNVFTKDAKYRKDNLV--T 268
W L + VVAPMVD SELAWRLL RRHGA LCYTPMLH+ VF +DA YRK+NL
Sbjct: 10 WSRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEV 69
Query: 269 CEEDRPLIVQFCGNNPEIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQDDWELL 448
C EDRPLIVQFC N+PE+ AA LA++YCDAID+NLGCPQ IAKRG YG+FLQD+W+LL
Sbjct: 70 CPEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLL 129
Query: 449 KEIVTAMSKAVSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLTVH 586
+ ++ + +S+P+TCK+R+F +IDK+V YA+MLE +GC+LLTVH
Sbjct: 130 QRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVH 175
>BC062566-1|AAH62566.1| 473|Homo sapiens DUS1L protein protein.
Length = 473
Score = 244 bits (598), Expect = 1e-64
Identities = 106/166 (63%), Positives = 132/166 (79%), Gaps = 2/166 (1%)
Frame = +2
Query: 95 WIFELNNPQFVVAPMVDASELAWRLLCRRHGANLCYTPMLHSNVFTKDAKYRKDNLV--T 268
W L + VVAPMVD SELAWRLL RRHGA LCYTPMLH+ VF +DA YRK+NL
Sbjct: 10 WSRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEV 69
Query: 269 CEEDRPLIVQFCGNNPEIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQDDWELL 448
C EDRPLIVQFC N+PE+ AA LA++YCDAID+NLGCPQ IAKRG YG+FLQD+W+LL
Sbjct: 70 CPEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLL 129
Query: 449 KEIVTAMSKAVSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLTVH 586
+ ++ + +S+P+TCK+R+F +IDK+V YA+MLE +GC+LLTVH
Sbjct: 130 QRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVH 175
>BC017081-1|AAH17081.4| 406|Homo sapiens DUS1L protein protein.
Length = 406
Score = 165 bits (402), Expect = 8e-41
Identities = 67/106 (63%), Positives = 89/106 (83%)
Frame = +2
Query: 269 CEEDRPLIVQFCGNNPEIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQDDWELL 448
C EDRPLIVQFC N+PE+ AA LA++YCDAID+NLGCPQ IAKRG YG+FLQD+W+LL
Sbjct: 3 CPEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLL 62
Query: 449 KEIVTAMSKAVSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLTVH 586
+ ++ + +S+P+TCK+R+F +IDK+V YA+MLE +GC+LLTVH
Sbjct: 63 QRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVH 108
>U62767-1|AAD00100.1| 307|Homo sapiens PP35 protein.
Length = 307
Score = 118 bits (283), Expect = 2e-26
Identities = 61/157 (38%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Frame = +2
Query: 125 VVAPMVDASELAWRLLCRRHGANLCYTPMLHSNVFTKDAKYRKDNLVTCEEDRPLIVQFC 304
V APMV S+LA+R L R++ +LCYTPM+ + F K K R T + D PLIVQF
Sbjct: 20 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKARDSEFTTNQGDCPLIVQFA 79
Query: 305 GNNPEIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKAVS 484
N+ +++ AA++ Y + IDIN GCPQ A YG+ L + EL++++V + V
Sbjct: 80 ANDARLLSDAARIVCPYANGIDINCGCPQRWAMAEGYGACLINKPELVQDMVKQVRNQVE 139
Query: 485 IP---ITCKVRIFEDIDKSVNYAKMLEASGCKLLTVH 586
P ++ K+RI +D+ ++V+ + EA+G +TVH
Sbjct: 140 TPGFSVSIKIRINDDLKRTVDLCQKAEATGVSWITVH 176
>BC006527-1|AAH06527.1| 493|Homo sapiens dihydrouridine synthase
2-like, SMM1 homolog (S. cerevisiae) protein.
Length = 493
Score = 77.4 bits (182), Expect = 4e-14
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 15/171 (8%)
Frame = +2
Query: 119 QFVVAPMVDASELAWRLLCRRHGANLCYTPML------------HSNVFTKDAKYRKDNL 262
+ ++APMV L RLL +GA++ Y L + + T D D +
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRV 72
Query: 263 V--TCEEDRPLIV-QFCGNNPEIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQD 433
V TCE ++ +V Q ++ E + A+L E ID+N+GCP+ + +G G+ L
Sbjct: 73 VFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLS 132
Query: 434 DWELLKEIVTAMSKAVSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLTVH 586
D + +++I++ + K P+TCK+RI ++ +++ K +E +G + VH
Sbjct: 133 DPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVH 183
>AK000406-1|BAA91143.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ20399 fis, clone KAT00581. ).
Length = 493
Score = 77.4 bits (182), Expect = 4e-14
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 15/171 (8%)
Frame = +2
Query: 119 QFVVAPMVDASELAWRLLCRRHGANLCYTPML------------HSNVFTKDAKYRKDNL 262
+ ++APMV L RLL +GA++ Y L + + T D D +
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRV 72
Query: 263 V--TCEEDRPLIV-QFCGNNPEIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQD 433
V TCE ++ +V Q ++ E + A+L E ID+N+GCP+ + +G G+ L
Sbjct: 73 VFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLS 132
Query: 434 DWELLKEIVTAMSKAVSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLTVH 586
D + +++I++ + K P+TCK+RI ++ +++ K +E +G + VH
Sbjct: 133 DPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVH 183
>AB101210-1|BAE07219.1| 493|Homo sapiens up-regulated in lung
cancer 8 protein.
Length = 493
Score = 77.4 bits (182), Expect = 4e-14
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 15/171 (8%)
Frame = +2
Query: 119 QFVVAPMVDASELAWRLLCRRHGANLCYTPML------------HSNVFTKDAKYRKDNL 262
+ ++APMV L RLL +GA++ Y L + + T D D +
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRV 72
Query: 263 V--TCEEDRPLIV-QFCGNNPEIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQD 433
V TCE ++ +V Q ++ E + A+L E ID+N+GCP+ + +G G+ L
Sbjct: 73 VFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLS 132
Query: 434 DWELLKEIVTAMSKAVSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLTVH 586
D + +++I++ + K P+TCK+RI ++ +++ K +E +G + VH
Sbjct: 133 DPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVH 183
>BC003659-1|AAH03659.2| 299|Homo sapiens DUS1L protein protein.
Length = 299
Score = 56.0 bits (129), Expect = 9e-08
Identities = 21/35 (60%), Positives = 31/35 (88%)
Frame = +2
Query: 482 SIPITCKVRIFEDIDKSVNYAKMLEASGCKLLTVH 586
++ +TCK+R+F +IDK+V YA+MLE +GC+LLTVH
Sbjct: 10 TLSVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVH 44
>BC009973-1|AAH09973.1| 650|Homo sapiens dihydrouridine synthase
3-like (S. cerevisiae) protein.
Length = 650
Score = 53.2 bits (122), Expect = 7e-07
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Frame = +2
Query: 128 VAPMVDASELAWRLLCRRHGANL-CYTPMLHSNVFTKD-AKYRKDNLVTCEEDRPLIVQF 301
+AP+ L +R +C+R GA++ C + +N+ +++ CE+ VQ
Sbjct: 309 LAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDI--FGVQL 366
Query: 302 CGNNPEIMASAAKLAEEYC--DAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSK 475
G P+ M A+L D +DIN+GCP + + G L + ++IV M++
Sbjct: 367 EGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQ 426
Query: 476 AVSIPITCKVR--IFEDIDKSVNYAKMLEASGCKLLTVH 586
+ +P+T K+R + E ++ + L G L+T+H
Sbjct: 427 VLDVPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTLH 465
>BC008362-1|AAH08362.1| 613|Homo sapiens DUS3L protein protein.
Length = 613
Score = 53.2 bits (122), Expect = 7e-07
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Frame = +2
Query: 128 VAPMVDASELAWRLLCRRHGANL-CYTPMLHSNVFTKD-AKYRKDNLVTCEEDRPLIVQF 301
+AP+ L +R +C+R GA++ C + +N+ +++ CE+ VQ
Sbjct: 272 LAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDI--FGVQL 329
Query: 302 CGNNPEIMASAAKLAEEYC--DAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSK 475
G P+ M A+L D +DIN+GCP + + G L + ++IV M++
Sbjct: 330 EGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQ 389
Query: 476 AVSIPITCKVR--IFEDIDKSVNYAKMLEASGCKLLTVH 586
+ +P+T K+R + E ++ + L G L+T+H
Sbjct: 390 VLDVPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTLH 428
>BC004549-1|AAH04549.1| 408|Homo sapiens DUS3L protein protein.
Length = 408
Score = 53.2 bits (122), Expect = 7e-07
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Frame = +2
Query: 128 VAPMVDASELAWRLLCRRHGANL-CYTPMLHSNVFTKD-AKYRKDNLVTCEEDRPLIVQF 301
+AP+ L +R +C+R GA++ C + +N+ +++ CE+ VQ
Sbjct: 67 LAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDI--FGVQL 124
Query: 302 CGNNPEIMASAAKLAEEYC--DAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSK 475
G P+ M A+L D +DIN+GCP + + G L + ++IV M++
Sbjct: 125 EGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQ 184
Query: 476 AVSIPITCKVR--IFEDIDKSVNYAKMLEASGCKLLTVH 586
+ +P+T K+R + E ++ + L G L+T+H
Sbjct: 185 VLDVPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTLH 223
>AK023958-1|BAB14740.1| 650|Homo sapiens protein ( Homo sapiens
cDNA FLJ13896 fis, clone THYRO1001703, weakly similar to
NIFR3-LIKE PROTEIN. ).
Length = 650
Score = 53.2 bits (122), Expect = 7e-07
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Frame = +2
Query: 128 VAPMVDASELAWRLLCRRHGANL-CYTPMLHSNVFTKD-AKYRKDNLVTCEEDRPLIVQF 301
+AP+ L +R +C+R GA++ C + +N+ +++ CE+ VQ
Sbjct: 309 LAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDI--FGVQL 366
Query: 302 CGNNPEIMASAAKLAEEYC--DAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSK 475
G P+ M A+L D +DIN+GCP + + G L + ++IV M++
Sbjct: 367 EGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQ 426
Query: 476 AVSIPITCKVR--IFEDIDKSVNYAKMLEASGCKLLTVH 586
+ +P+T K+R + E ++ + L G L+T+H
Sbjct: 427 VLDVPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTLH 465
>AL365411-1|CAB96955.1| 465|Homo sapiens hypothetical protein,
similar to (AF091072.1) predicted protein [Homo sapiens]
protein.
Length = 465
Score = 51.6 bits (118), Expect = 2e-06
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Frame = +2
Query: 128 VAPMVDASELAWRLLCRRHGANL-CYTPMLHSNVFTKD-AKYRKDNLVTCEEDRPLIVQF 301
+AP+ L +R +C+R GA++ C + +N+ +++ CE+ VQ
Sbjct: 292 LAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDI--FGVQL 349
Query: 302 CGNNPEIMASAAKLAEEYC--DAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSK 475
G P+ M A+L D +DIN+GCP + + G L + ++IV M++
Sbjct: 350 EGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQ 409
Query: 476 AVSIPITCKVRIFEDIDKSVNYAKML 553
+ +P+T K+R + + VN A L
Sbjct: 410 VLDVPLTVKIR--TGVQERVNLAHRL 433
>AF091072-1|AAC72941.1| 223|Homo sapiens unknown protein.
Length = 223
Score = 41.1 bits (92), Expect = 0.003
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 359 DAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKAVSIPITCKVR--IFEDIDKS 532
D +DIN+GCP + + G L + ++IV M++ + +P+T K+R + E ++ +
Sbjct: 12 DFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIRTGVQERVNLA 71
Query: 533 VNYAKMLEASGCKLLTVH 586
L G L+T+H
Sbjct: 72 HRLLPELRDWGVALVTLH 89
>BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 40.3 bits (90), Expect = 0.005
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 302 CGNNPEIMASAAKLAEEY-CDAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKA 478
C N AK +E+ DA+++NL CP + +RG G D EL++ I + +A
Sbjct: 643 CSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERG-MGLACGQDPELVRNICRWVRQA 701
Query: 479 VSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLT 580
V IP K + ++ V+ A+ + G +T
Sbjct: 702 VQIPFFAK--LTPNVTDIVSIARAAKEGGANGIT 733
>U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 39.9 bits (89), Expect = 0.007
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 302 CGNNPEIMASAAKLAEEY-CDAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKA 478
C N AK +E+ DA+++NL CP + +RG G D EL++ I + +A
Sbjct: 643 CSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERG-MGLACGQDPELVRNICRWVRQA 701
Query: 479 VSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLT 580
V IP K + ++ V+ A+ + G +T
Sbjct: 702 VQIPFFAK--LTPNVTDIVSIARAAKEGGANGVT 733
>U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 39.9 bits (89), Expect = 0.007
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 302 CGNNPEIMASAAKLAEEY-CDAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKA 478
C N AK +E+ DA+++NL CP + +RG G D EL++ I + +A
Sbjct: 643 CSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERG-MGLACGQDPELVRNICRWVRQA 701
Query: 479 VSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLT 580
V IP K + ++ V+ A+ + G +T
Sbjct: 702 VQIPFFAK--LTPNVTDIVSIARAAKEGGANGVT 733
>BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 39.9 bits (89), Expect = 0.007
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 302 CGNNPEIMASAAKLAEEY-CDAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKA 478
C N AK +E+ DA+++NL CP + +RG G D EL++ I + +A
Sbjct: 643 CSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERG-MGLACGQDPELVRNICRWVRQA 701
Query: 479 VSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLT 580
V IP K + ++ V+ A+ + G +T
Sbjct: 702 VQIPFFAK--LTPNVTDIVSIARAAKEGGANGVT 733
>BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 39.9 bits (89), Expect = 0.007
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 302 CGNNPEIMASAAKLAEEY-CDAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKA 478
C N AK +E+ DA+++NL CP + +RG G D EL++ I + +A
Sbjct: 643 CSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERG-MGLACGQDPELVRNICRWVRQA 701
Query: 479 VSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLT 580
V IP K + ++ V+ A+ + G +T
Sbjct: 702 VQIPFFAK--LTPNVTDIVSIARAAKEGGANGVT 733
>AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 39.9 bits (89), Expect = 0.007
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 302 CGNNPEIMASAAKLAEEY-CDAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKA 478
C N AK +E+ DA+++NL CP + +RG G D EL++ I + +A
Sbjct: 643 CSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERG-MGLACGQDPELVRNICRWVRQA 701
Query: 479 VSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLT 580
V IP K + ++ V+ A+ + G +T
Sbjct: 702 VQIPFFAK--LTPNVTDIVSIARAAKEGGANGVT 733
>AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 39.9 bits (89), Expect = 0.007
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 302 CGNNPEIMASAAKLAEEY-CDAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKA 478
C N AK +E+ DA+++NL CP + +RG G D EL++ I + +A
Sbjct: 643 CSYNKNDWTELAKKSEDSGADALELNLSCPHGMGERG-MGLACGQDPELVRNICRWVRQA 701
Query: 479 VSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLT 580
V IP K + ++ V+ A+ + G +T
Sbjct: 702 VQIPFFAK--LTPNVTDIVSIARAAKEGGANGVT 733
>BC111774-1|AAI11775.1| 196|Homo sapiens DUS4L protein protein.
Length = 196
Score = 38.3 bits (85), Expect = 0.020
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +2
Query: 413 YGSFLQDDWELLKEIVTAMSKAVSIP---ITCKVRIFEDIDKSVNYAKMLEASGCKLLTV 583
YG+ L + EL++++V + V P ++ K+RI +D+ ++V+ + EA+G +TV
Sbjct: 5 YGACLINKPELVQDMVKQVRNQVETPGFSVSIKIRIHDDLKRTVDLCQKAEATGVSWITV 64
Query: 584 H 586
H
Sbjct: 65 H 65
>BC012180-1|AAH12180.1| 621|Homo sapiens KIAA1279 protein.
Length = 621
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 212 LHSNVFTKDAKYRKDNLVTCEEDRPLIVQFCGNNPE 319
L+ + T D K +NL T E IV +C +PE
Sbjct: 553 LYGKIITADPKKELENLATSLEHYKFIVDYCEKHPE 588
>AL359844-4|CAH72378.1| 621|Homo sapiens KIAA1279 protein.
Length = 621
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 212 LHSNVFTKDAKYRKDNLVTCEEDRPLIVQFCGNNPE 319
L+ + T D K +NL T E IV +C +PE
Sbjct: 553 LYGKIITADPKKELENLATSLEHYKFIVDYCEKHPE 588
>AB033105-1|BAA86593.1| 632|Homo sapiens KIAA1279 protein protein.
Length = 632
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 212 LHSNVFTKDAKYRKDNLVTCEEDRPLIVQFCGNNPE 319
L+ + T D K +NL T E IV +C +PE
Sbjct: 564 LYGKIITADPKKELENLATSLEHYKFIVDYCEKHPE 599
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,526,947
Number of Sequences: 237096
Number of extensions: 1561131
Number of successful extensions: 2418
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2410
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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