Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c20f
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical pr... 180 9e-46
U21323-13|AAA62547.2| 284|Caenorhabditis elegans Hypothetical p... 106 1e-23
AL032643-4|CAA21662.1| 436|Caenorhabditis elegans Hypothetical ... 80 1e-15
AF125451-6|AAD12825.1| 554|Caenorhabditis elegans Hypothetical ... 47 9e-06
U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical pr... 33 0.20
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 30 1.1
L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease pr... 30 1.1
L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease pr... 30 1.1
AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered cut... 30 1.1
AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered cut... 30 1.1
AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered cut... 30 1.1
AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered cut... 30 1.1
AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered cut... 30 1.1
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 30 1.1
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z75550-11|CAE17966.1| 133|Caenorhabditis elegans Hypothetical p... 28 4.3
Z66513-6|CAA91335.1| 565|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical p... 27 7.5
Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical p... 27 7.5
Z67995-2|CAA91944.2| 458|Caenorhabditis elegans Hypothetical pr... 27 7.5
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 27 7.5
>Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical
protein F36A2.2 protein.
Length = 527
Score = 180 bits (437), Expect = 9e-46
Identities = 79/166 (47%), Positives = 118/166 (71%), Gaps = 2/166 (1%)
Frame = +2
Query: 95 WIFELNNPQF--VVAPMVDASELAWRLLCRRHGANLCYTPMLHSNVFTKDAKYRKDNLVT 268
W L N + V+APMVD SELA+R+ R++GA L +TPM+H+++F D YR+++L
Sbjct: 64 WKETLENQRITKVLAPMVDQSELAFRMFTRKYGAQLTFTPMIHAHLFVNDGTYRRNSLAL 123
Query: 269 CEEDRPLIVQFCGNNPEIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQDDWELL 448
+ DRPL+VQFC N + +A +L E+ CD +D+NLGCPQ +AKRGRYGS+LQD+ +L+
Sbjct: 124 VKADRPLVVQFCANKVDTFLAACRLVEDVCDGVDLNLGCPQMVAKRGRYGSWLQDEVDLI 183
Query: 449 KEIVTAMSKAVSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLTVH 586
E+V+A+ +PI+CK+R+ +D ++V YAK L +G +LTVH
Sbjct: 184 CEMVSAVRDYCRLPISCKIRVRDDRQQTVEYAKRLVDAGATMLTVH 229
>U21323-13|AAA62547.2| 284|Caenorhabditis elegans Hypothetical
protein C45G9.2 protein.
Length = 284
Score = 106 bits (254), Expect = 1e-23
Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 3/153 (1%)
Frame = +2
Query: 137 MVDASELAWRLLCRRHGANLCYTPMLHSNVFTKDAKYRKDNLVTCEEDRPLIVQFCGNNP 316
MV S+LA+R L R + ++C+TPM+++ F + K R L CE D PLIVQF ++P
Sbjct: 1 MVRYSKLAFRQLVRVYDVDVCFTPMIYAKNFIESEKCRSSELSVCEGDSPLIVQFATDDP 60
Query: 317 EIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKAVSIP-- 490
+++ AA++ + +D+N GCP+ + +GS L ELL ++V + P
Sbjct: 61 FVLSEAAEMVYKCSTGVDLNCGCPKHDVRSKGFGSALLSKPELLADMVRQTRARIPDPDF 120
Query: 491 -ITCKVRIFEDIDKSVNYAKMLEASGCKLLTVH 586
++ K+RI DI+K+V+ + EA+G LTVH
Sbjct: 121 SVSLKIRINHDIEKTVDLCRKAEAAGVTHLTVH 153
>AL032643-4|CAA21662.1| 436|Caenorhabditis elegans Hypothetical
protein Y54E5A.6 protein.
Length = 436
Score = 79.8 bits (188), Expect = 1e-15
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Frame = +2
Query: 125 VVAPMVDASELAWRLLCRRHGANLCYTP------MLHSNVFTKDA----KYRK-DNLV-- 265
++APMV A RLLC ++GA+LCYT ++ + +A YR D+++
Sbjct: 10 ILAPMVRAGRTPLRLLCLKYGADLCYTEEIVDKKLIEATRVVNEALGTIDYRNGDDIILR 69
Query: 266 -TCEEDRPLIVQFCGNNPEIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQDDWE 442
EE I+Q N+ E A A++ + ID+N+GCP+ + G+ L E
Sbjct: 70 LAPEEKGRCILQIGTNSGEKAAKIAQIVGDDVAGIDVNMGCPKPFSIHCGMGAALLTQTE 129
Query: 443 LLKEIVTAMSKAVSIPITCKVRIFEDIDKSVNYAKMLEASGCKLLTVH 586
+ +I+T++ A +P+TCK+R+ +D + ++ + +E L VH
Sbjct: 130 KIVDILTSLKSAAKVPVTCKIRVLDDPEDTLKLVQEIEKCRVSALGVH 177
>AF125451-6|AAD12825.1| 554|Caenorhabditis elegans Hypothetical
protein Y37E11B.5 protein.
Length = 554
Score = 47.2 bits (107), Expect = 9e-06
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Frame = +2
Query: 128 VAPMVDASELAWRLLCRRHGANL-CYTPMLHSNVFTKDA-KYRKDNLVTCEEDRPLIVQF 301
+AP+ L +R +C +GA++ C L +++ + A +Y CE + VQ
Sbjct: 208 LAPLTTVGNLPFRRICVDYGADITCGEMALATSILSGTASEYSLLKRHPCE--KIFGVQL 265
Query: 302 CGNNPEIMASAAKLAEEYCDA--IDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSK 475
G + MA A+++ E D IDIN+GCP + + G L + L E++ A
Sbjct: 266 AGGFADTMAKASQIVVENFDVDFIDINMGCPIDVVNQKGGGCALPSRPQKLFEVLAATKS 325
Query: 476 AVS--IPITCKVR--IFEDIDKSVNYAKMLE 556
+ P+T K+R + E + K+ Y + ++
Sbjct: 326 VLGGCCPLTVKIRTGMKEGVLKAPEYVEHMK 356
>U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical
protein C25F6.3 protein.
Length = 1059
Score = 32.7 bits (71), Expect = 0.20
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 308 NNPEIMASAAKLAEEYCDAIDINLGCPQSIAKRGRYGSFLQDDWELLKEIVTAMSKAVSI 487
N + + A K E D +++NL CP + ++G G E++KEI + V I
Sbjct: 660 NKADWIELATKSEEAGADILELNLSCPHGMGEKG-MGLACGQSPEIVKEICRWVRACVKI 718
Query: 488 PITCKV 505
P K+
Sbjct: 719 PFFPKM 724
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 369 SIASQYSSANFAADAIISGLLPQNCTIK--GRSSSQVTRLSFLYLA 238
SIA+ YSSA+F AI++ +P CT K G S+S + LA
Sbjct: 10 SIATTYSSADFRQPAIVTVDVPGGCTDKHTGTSASAPLAAGIIALA 55
>L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease
protein.
Length = 658
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 369 SIASQYSSANFAADAIISGLLPQNCTIK--GRSSSQVTRLSFLYLA 238
SIA+ YSSA+F AI++ +P CT K G S+S + LA
Sbjct: 383 SIATTYSSADFRQPAIVTVDVPGGCTDKHTGTSASAPLAAGIIALA 428
>L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease
protein.
Length = 684
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 369 SIASQYSSANFAADAIISGLLPQNCTIK--GRSSSQVTRLSFLYLA 238
SIA+ YSSA+F AI++ +P CT K G S+S + LA
Sbjct: 383 SIATTYSSADFRQPAIVTVDVPGGCTDKHTGTSASAPLAAGIIALA 428
>AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered
cuticle protein 4, isoformf protein.
Length = 666
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 369 SIASQYSSANFAADAIISGLLPQNCTIK--GRSSSQVTRLSFLYLA 238
SIA+ YSSA+F AI++ +P CT K G S+S + LA
Sbjct: 383 SIATTYSSADFRQPAIVTVDVPGGCTDKHTGTSASAPLAAGIIALA 428
>AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered
cuticle protein 4, isoforme protein.
Length = 699
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 369 SIASQYSSANFAADAIISGLLPQNCTIK--GRSSSQVTRLSFLYLA 238
SIA+ YSSA+F AI++ +P CT K G S+S + LA
Sbjct: 383 SIATTYSSADFRQPAIVTVDVPGGCTDKHTGTSASAPLAAGIIALA 428
>AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered
cuticle protein 4, isoforma protein.
Length = 670
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 369 SIASQYSSANFAADAIISGLLPQNCTIK--GRSSSQVTRLSFLYLA 238
SIA+ YSSA+F AI++ +P CT K G S+S + LA
Sbjct: 383 SIATTYSSADFRQPAIVTVDVPGGCTDKHTGTSASAPLAAGIIALA 428
>AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered
cuticle protein 4, isoformb protein.
Length = 730
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 369 SIASQYSSANFAADAIISGLLPQNCTIK--GRSSSQVTRLSFLYLA 238
SIA+ YSSA+F AI++ +P CT K G S+S + LA
Sbjct: 383 SIATTYSSADFRQPAIVTVDVPGGCTDKHTGTSASAPLAAGIIALA 428
>AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered
cuticle protein 4, isoformc protein.
Length = 827
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 369 SIASQYSSANFAADAIISGLLPQNCTIK--GRSSSQVTRLSFLYLA 238
SIA+ YSSA+F AI++ +P CT K G S+S + LA
Sbjct: 383 SIATTYSSADFRQPAIVTVDVPGGCTDKHTGTSASAPLAAGIIALA 428
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 369 SIASQYSSANFAADAIISGLLPQNCTIK--GRSSSQVTRLSFLYLA 238
SIA+ YSSA+F AI++ +P CT K G S+S + LA
Sbjct: 383 SIATTYSSADFRQPAIVTVDVPGGCTDKHTGTSASAPLAAGIIALA 428
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 125 VVAPMVDASELAWRLLCRRHGANLCYTPMLHSNV 226
V+ P LAWR LC+ G + TP++ N+
Sbjct: 905 VLYPFTGHMVLAWRTLCKLKGLDYTKTPVVFENI 938
>Z75550-11|CAE17966.1| 133|Caenorhabditis elegans Hypothetical
protein T22C1.12 protein.
Length = 133
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 446 LKEIVTAMSKAVSIPITCKVRIFEDIDKSVNYAKM 550
L + ++ +A S+P+ CK + + +D V YAKM
Sbjct: 8 LVAFIISLVQAESVPVMCKCPVLKQVDAEV-YAKM 41
>Z66513-6|CAA91335.1| 565|Caenorhabditis elegans Hypothetical
protein F54D5.9 protein.
Length = 565
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 407 GRYGSFLQDDWELLKEIVTAMSKAVSIPITCKVRIFEDIDKSVNYAKML 553
G Y +FL+ W + + M K + C +I E++D ++ A++L
Sbjct: 481 GCYKAFLEKIWNVQSSRLKEMVKNATNTTECSEKIREELDGQLSMARLL 529
>Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical
protein C08B6.1b protein.
Length = 540
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 405 EEDMDPFFKMTGNY*KRS*LQCPRLF 482
E D+ FFKM GN+ K QC +F
Sbjct: 105 ESDIALFFKMAGNFSKTCGYQCQHVF 130
>Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical
protein C08B6.1a protein.
Length = 536
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 405 EEDMDPFFKMTGNY*KRS*LQCPRLF 482
E D+ FFKM GN+ K QC +F
Sbjct: 105 ESDIALFFKMAGNFSKTCGYQCQHVF 130
>Z67995-2|CAA91944.2| 458|Caenorhabditis elegans Hypothetical
protein M153.2 protein.
Length = 458
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -1
Query: 387 GHPRLMSIASQYSSANFAADAIISGLLPQNCTIKGRSSSQVTRLSFLYL 241
G+ L I + ++ ANFAA I+ L P+ + G + ++ FL+L
Sbjct: 50 GYYSLAIIYAVFTVANFAAAPIVDILTPKWAMVFGSCCYTIFQVGFLFL 98
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/84 (21%), Positives = 35/84 (41%)
Frame = -1
Query: 342 NFAADAIISGLLPQNCTIKGRSSSQVTRLSFLYLASFVKTLLCNIGV*HKFAPCRLQSRR 163
NF A +I LL + GR+ + T ++F + + +L + + +P QS
Sbjct: 893 NFTAYQLIPDLLGATGAVSGRALTSSTPINFAIASYYYLDVLIHADFTYLLSPADYQSLV 952
Query: 162 QASSLASTIGATTNCGLFNSKIQL 91
+ + T G T + I++
Sbjct: 953 SSITFRPTQGTATLSTAYKKAIEI 976
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,181,758
Number of Sequences: 27780
Number of extensions: 265394
Number of successful extensions: 590
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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