Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c20f
         (588 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.0  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/29 (34%), Positives = 11/29 (37%)
 Frame = +2

Query: 95  WIFELNNPQFVVAPMVDASELAWRLLCRR 181
           WI    NP        D     WRL CR+
Sbjct: 349 WINSAINPFIYAFYSADFRLAFWRLTCRK 377


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 106 LKNPVSHYVIIIYEANYYFFVR 41
           L+N +++++  I    YYFF+R
Sbjct: 216 LENKLNYFIEDIGLNTYYFFLR 237


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 13  NHNDCELSIIVQKNNNSPRK 72
           NH D   +I++   NN+  K
Sbjct: 479 NHADFSYTIVINNRNNTSMK 498


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,558
Number of Sequences: 438
Number of extensions: 3198
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)