Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c19r
(722 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16350.1 68414.m01956 inosine-5'-monophosphate dehydrogenase,... 195 2e-50
At1g79470.1 68414.m09262 inosine-5'-monophosphate dehydrogenase ... 192 2e-49
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 38 0.007
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 36 0.027
At3g14420.3 68416.m01828 (S)-2-hydroxy-acid oxidase, peroxisomal... 36 0.036
At3g14420.2 68416.m01827 (S)-2-hydroxy-acid oxidase, peroxisomal... 36 0.036
At3g14420.1 68416.m01826 (S)-2-hydroxy-acid oxidase, peroxisomal... 36 0.036
At3g14415.1 68416.m01824 (S)-2-hydroxy-acid oxidase, peroxisomal... 36 0.036
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 34 0.11
At5g64250.2 68418.m08072 2-nitropropane dioxygenase family / NPD... 31 0.77
At5g64250.1 68418.m08071 2-nitropropane dioxygenase family / NPD... 31 0.77
At3g09920.1 68416.m01183 phosphatidylinositol-4-phosphate 5-kina... 30 1.8
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 29 3.1
At1g33700.1 68414.m04167 expressed protein contains Pfam domain ... 28 5.5
>At1g16350.1 68414.m01956 inosine-5'-monophosphate dehydrogenase,
putative strong similarity to SP|P47996 gb|L34684
inosine monophosphate dehydrogenase (IMPDH) from
Arabidopsis thaliana; member of the PF|00478 IMP
dehydrogenase family
Length = 502
Score = 195 bits (476), Expect = 2e-50
Identities = 103/186 (55%), Positives = 130/186 (69%)
Frame = -3
Query: 720 TQEVMACGCPQATAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAG 541
TQEV A G QATAVY+V++ A VPVIADGGI + GHI+K+L LGASTVMMGS LAG
Sbjct: 323 TQEVCAVGRGQATAVYKVSTLAAQHGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 382
Query: 540 TSEAPGEYFFSDGVRLKKYRGMGSLEAMESKDGKGSAMSRYFHKESDKHRVAQGVSGSIV 361
++EAPG Y + +G R+KKYRGMGSLEAM KGS RY ++ K ++AQGV G++
Sbjct: 383 STEAPGAYEYRNGRRVKKYRGMGSLEAMT----KGSD-QRYL-GDTAKLKIAQGVVGAVA 436
Query: 360 DKGSVLRFLPYLQAGMQHSCQDLGARSVSVLREMSHSGDLRFMKRTYSAQLEGNVHGLFS 181
DKGSVL+F+PY ++ QDLGA S+ E+ LR RT +AQ+EG +HGL S
Sbjct: 437 DKGSVLKFIPYTMHAVKQGFQDLGASSLQSAHELLRDNTLRLEARTGAAQIEGGIHGLVS 496
Query: 180 YEKRLF 163
YEK+ F
Sbjct: 497 YEKKSF 502
>At1g79470.1 68414.m09262 inosine-5'-monophosphate dehydrogenase
identical to inosine-5'-monophosphate dehydrogenase
SP|P47996 {Arabidopsis thaliana}
Length = 503
Score = 192 bits (469), Expect = 2e-49
Identities = 103/186 (55%), Positives = 129/186 (69%)
Frame = -3
Query: 720 TQEVMACGCPQATAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAG 541
TQEV A G QATAVY+V S A +PVIADGGI + GHI+K+L LGASTVMMGS LAG
Sbjct: 324 TQEVCAVGRGQATAVYKVCSIAAQSGIPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 383
Query: 540 TSEAPGEYFFSDGVRLKKYRGMGSLEAMESKDGKGSAMSRYFHKESDKHRVAQGVSGSIV 361
++EAPG Y +++G R+KKYRGMGSLEAM KGS RY ++ K ++AQGV G++
Sbjct: 384 STEAPGGYEYTNGKRIKKYRGMGSLEAMT----KGSD-QRYLGDQT-KLKIAQGVVGAVA 437
Query: 360 DKGSVLRFLPYLQAGMQHSCQDLGARSVSVLREMSHSGDLRFMKRTYSAQLEGNVHGLFS 181
DKGSVL+ +PY ++ QDLGA S+ + S LR RT +AQ+EG VHGL S
Sbjct: 438 DKGSVLKLIPYTMHAVKQGFQDLGASSLQSAHGLLRSNILRLEARTGAAQVEGGVHGLVS 497
Query: 180 YEKRLF 163
YEK+ F
Sbjct: 498 YEKKSF 503
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = -3
Query: 693 PQATAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGEYF 514
P V + +A +PV+ DGG++ + K+LALGA V++G + A GE
Sbjct: 261 PATITVLEEVVHAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGLAAKGE-- 318
Query: 513 FSDGVR 496
DGV+
Sbjct: 319 --DGVK 322
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 35.9 bits (79), Expect = 0.027
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = -3
Query: 684 TAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGEYFFSD 505
T + +V R +PV+ DGG++ + K+LALGA V++G + A GE D
Sbjct: 265 TVLEEVVQVVRG-RIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIIYGLAAKGE----D 319
Query: 504 GVR 496
GV+
Sbjct: 320 GVK 322
>At3g14420.3 68416.m01828 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 366
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -3
Query: 693 PQATAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGE 520
P + + A +PV DGG++ + K+LALGAS + +G + + A GE
Sbjct: 262 PATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGE 319
>At3g14420.2 68416.m01827 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 367
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -3
Query: 693 PQATAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGE 520
P + + A +PV DGG++ + K+LALGAS + +G + + A GE
Sbjct: 263 PATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGE 320
>At3g14420.1 68416.m01826 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 367
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -3
Query: 693 PQATAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGE 520
P + + A +PV DGG++ + K+LALGAS + +G + + A GE
Sbjct: 263 PATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGE 320
>At3g14415.1 68416.m01824 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 367
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -3
Query: 693 PQATAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGE 520
P + + A VPV DGG++ + K+LALGAS + +G + A GE
Sbjct: 263 PATISALEEVVKATQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFALAAEGE 320
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -3
Query: 642 VPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGE 520
+PV DGG++ + K+LALGAS V +G + A GE
Sbjct: 280 IPVFLDGGVRRGTDVFKALALGASGVFVGRPSLFSLAADGE 320
>At5g64250.2 68418.m08072 2-nitropropane dioxygenase family / NPD
family contains Pfam profile PF03060: oxidoreductase,
2-nitropropane dioxygenase (NPD) family
Length = 333
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 645 NVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEA 529
++PVIA GGI + +L+LGA V +G+ T E+
Sbjct: 164 DIPVIAAGGIVDGRGYVAALSLGAQGVCLGTRFVATHES 202
>At5g64250.1 68418.m08071 2-nitropropane dioxygenase family / NPD
family contains Pfam profile PF03060: oxidoreductase,
2-nitropropane dioxygenase (NPD) family
Length = 293
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 645 NVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEA 529
++PVIA GGI + +L+LGA V +G+ T E+
Sbjct: 124 DIPVIAAGGIVDGRGYVAALSLGAQGVCLGTRFVATHES 162
>At3g09920.1 68416.m01183 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 815
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 597 IKSLALGASTVMMGSLLAGTSEAPGEYFFSDG 502
++ L L GSLL E PG+Y +SDG
Sbjct: 47 VRELVLPDGESYSGSLLGNVPEGPGKYIWSDG 78
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 139 DEILLSSNKTN*KILYVKISKFLMYICYIMNIFHGFFVCIV 17
DE+LL+ N +L V++ +F+M + ++ F FF +V
Sbjct: 418 DEMLLNEATENTGLLLVQVQRFMMVLSSVVQQFSNFFNWLV 458
>At1g33700.1 68414.m04167 expressed protein contains Pfam domain
PF04685: Protein of unknown function, DUF608
Length = 947
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -3
Query: 648 FNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGEYFFSDGVRLKKYR-GMG 472
FNV + DG +V ++ + ST++ + AGT+ + +G+ K +R G
Sbjct: 780 FNVMRVRDGTRGAVNGMLPDGRVDTSTMVSREVWAGTTYSVAACMIQEGLADKGFRTASG 839
Query: 471 SLEAMESKDGKGSA 430
EA S G G A
Sbjct: 840 IYEAAWSDRGLGCA 853
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,177,209
Number of Sequences: 28952
Number of extensions: 309817
Number of successful extensions: 776
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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