BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c19f
(584 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 25 1.8
AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside ... 24 3.2
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 24 3.2
AF316638-1|AAG45166.1| 211|Anopheles gambiae glutathione S-tran... 23 7.3
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 23 7.3
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 9.6
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 25.0 bits (52), Expect = 1.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 103 NKKNEYFVNFIARAPAKCETTSTSTPFLSHYPQT 2
N + +YF F P TTST P L P+T
Sbjct: 492 NGRGKYFQRFAKTTPLTTTTTSTEEPALE--PET 523
>AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside
phosphorylase protein.
Length = 353
Score = 24.2 bits (50), Expect = 3.2
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 488 ENSVKSTSSV-YSNGHSDRS*HGHIHGALR 574
+N ST+ V ++NGH + +GH +G R
Sbjct: 8 QNGKASTNGVPHANGHHQQHQNGHSNGVAR 37
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 24.2 bits (50), Expect = 3.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 466 STSSAVKSIYPGSSKKSLYVSPSLLAKVSSADNPSRRSP 350
S SSA + + GS + +P+LL+ +S N S + P
Sbjct: 1363 SISSAAQHDFQGSHRSPNGCAPNLLSSTTSTTNFSYQHP 1401
>AF316638-1|AAG45166.1| 211|Anopheles gambiae glutathione
S-transferase D12 protein.
Length = 211
Score = 23.0 bits (47), Expect = 7.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 391 LTVKDLHITISYCCLDI 441
LT+ D I +S+C LD+
Sbjct: 150 LTIADFSIFVSFCSLDM 166
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 23.0 bits (47), Expect = 7.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 441 IDFTAEEVDLTSPLTKKILLKAPLVSTPMDTVTE 542
+D A E DLTS + K A +VST M + +
Sbjct: 585 VDPLAREDDLTSLIDSKFESGAGIVSTTMTKMAD 618
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 22.6 bits (46), Expect = 9.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 477 PLTKKILLKAPLVSTPMDT 533
P T+ +LLK PLVS T
Sbjct: 1082 PTTRTLLLKRPLVSARYGT 1100
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,656
Number of Sequences: 2352
Number of extensions: 10254
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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