Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c18f
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.2  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   6.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   6.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   6.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.2  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +2

Query: 524 WTGGSTAPSPTSRTKGKCGSCWS 592
           W+ G  A   +S       SCWS
Sbjct: 20  WSSGPNATLQSSACTDDLSSCWS 42


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 318 QTQPEVRNGPRFLQAGHEQVRRH 386
           QT P +  GPRF      +  +H
Sbjct: 63  QTHPSIGGGPRFSSGVGRKAWKH 85


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 318 QTQPEVRNGPRFLQAGHEQVRRH 386
           QT P +  GPRF      +  +H
Sbjct: 63  QTHPSIGGGPRFSSGVGRKAWKH 85



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 567 LVLDVGDGAVLPPV 526
           LVL VG  A LPPV
Sbjct: 683 LVLQVGTHADLPPV 696


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 399 VREDYERLQQNCQTQQESV 455
           +REDY RL + C+   E +
Sbjct: 269 LREDYNRLCRLCKRVDEEI 287


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 399 VREDYERLQQNCQTQQESV 455
           +REDY RL + C+   E +
Sbjct: 269 LREDYNRLCRLCKRVDEEI 287


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 399 VREDYERLQQNCQTQQESV 455
           +REDY RL + C+   E +
Sbjct: 269 LREDYNRLCRLCKRVDEEI 287


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 77  FHSCIKNKCNLIHIHNKDNH 136
           +++C+ +   L+ I  K NH
Sbjct: 458 YYTCVSDGSKLVSIQRKCNH 477


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,930
Number of Sequences: 336
Number of extensions: 2918
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)