Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c18f
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical pr... 65 4e-11
AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily a... 46 3e-05
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical pr... 36 0.023
U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical p... 36 0.023
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 1.5
Z81103-3|CAB03209.1| 467|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 2.6
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 2.6
AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical ... 29 2.6
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81531-8|CAB04322.2| 344|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF067607-6|AAY86221.1| 461|Caenorhabditis elegans Hypothetical ... 28 4.6
AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical... 28 6.0
Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical pr... 27 8.0
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical
protein T03E6.7 protein.
Length = 337
Score = 64.9 bits (151), Expect = 4e-11
Identities = 35/119 (29%), Positives = 67/119 (56%)
Frame = +1
Query: 214 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 393
E+W +K Y SE E+ M+ + ++ I HN+ + +G ++++G+N D+
Sbjct: 30 EKWDDYKEDFDKEY-SESEEQTYMEAFVKNMIHIENHNRDHRLGRKTFEMGLNHIADLPF 88
Query: 394 HEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQG 570
++ K +NG+ + ++ +K S F++P NV++P++VDWR VTD+K+QG
Sbjct: 89 SQYRK-LNGYRRLFGDSR---IKNSS----SFLAPFNVQVPDEVDWRDTHLVTDVKNQG 139
Score = 33.5 bits (73), Expect = 0.12
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 560 RTKGKCGSCWSFSTTGA 610
+ +G CGSCW+FS TGA
Sbjct: 136 KNQGMCGSCWAFSATGA 152
>AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily
assigned gene nameprotein 196 protein.
Length = 477
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/111 (28%), Positives = 53/111 (47%)
Frame = +1
Query: 238 QHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMN 417
+H Y ++ E R +++ ++ +I + QK E G Y G K+ DM EF K M
Sbjct: 180 RHEKKYTNKREVLKRFRVFKKNAKVI-RELQKNEQGTAVY--GFTKFSDMTTMEFKKIML 236
Query: 418 GFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQG 570
+ + + +Y + ++ LPE DWR+ GAVT +K+QG
Sbjct: 237 PY----QWEQPVYPMEQANFEKHDVTINEEDLPESFDWREKGAVTQVKNQG 283
Score = 34.3 bits (75), Expect = 0.070
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 560 RTKGKCGSCWSFSTTG 607
+ +G CGSCW+FSTTG
Sbjct: 280 KNQGNCGSCWAFSTTG 295
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 226 AFK-LQHRLNYESEVEDNF-RMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 399
AFK L +N+ S ++ R +Y++ K + +HN YE+G+ SYK+ N++ L E
Sbjct: 134 AFKSLMDVINFNSTAKEGLKRFNVYSKVKKEVDEHNIMYELGMSSYKMSTNQFSVALDGE 193
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +1
Query: 214 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 393
+E+ F ++++ NY+ E+E FR + + + + K N+ + K G+NK+ D+
Sbjct: 45 KEFEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSK 104
Query: 394 HEFVKTMNGFNKTAKHNKNL 453
E + F K+N N+
Sbjct: 105 KEIHGMYSKFG-PPKNNTNV 123
>Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical
protein R07E3.1b protein.
Length = 348
Score = 35.9 bits (79), Expect = 0.023
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Frame = +1
Query: 208 VKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 387
+ +E+ A+ + +Y + E R+ Y IA N + E G Y G N D
Sbjct: 32 IAKEYIAYTEKFDKSYATSQESLKRLNAYYNTDENIANWNIQNEHGSAEY--GHNDMSDW 89
Query: 388 LHHEFVKTM---NGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDI 558
EF KT+ + + + K + + S+ K ++ P+ DWR +T +
Sbjct: 90 TDEEFEKTLLPKSFYKRLHKEAEFIEPIPESLTAKK--GESSSPFPDFFDWRDKNVITPV 147
Query: 559 KDQGE 573
K QG+
Sbjct: 148 KAQGQ 152
Score = 29.5 bits (63), Expect = 2.0
Identities = 8/15 (53%), Positives = 14/15 (93%)
Frame = +2
Query: 560 RTKGKCGSCWSFSTT 604
+ +G+CGSCW+F++T
Sbjct: 148 KAQGQCGSCWAFAST 162
>Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical
protein R07E3.1a protein.
Length = 402
Score = 35.9 bits (79), Expect = 0.023
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Frame = +1
Query: 208 VKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 387
+ +E+ A+ + +Y + E R+ Y IA N + E G Y G N D
Sbjct: 86 IAKEYIAYTEKFDKSYATSQESLKRLNAYYNTDENIANWNIQNEHGSAEY--GHNDMSDW 143
Query: 388 LHHEFVKTM---NGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDI 558
EF KT+ + + + K + + S+ K ++ P+ DWR +T +
Sbjct: 144 TDEEFEKTLLPKSFYKRLHKEAEFIEPIPESLTAKK--GESSSPFPDFFDWRDKNVITPV 201
Query: 559 KDQGE 573
K QG+
Sbjct: 202 KAQGQ 206
Score = 29.5 bits (63), Expect = 2.0
Identities = 8/15 (53%), Positives = 14/15 (93%)
Frame = +2
Query: 560 RTKGKCGSCWSFSTT 604
+ +G+CGSCW+F++T
Sbjct: 202 KAQGQCGSCWAFAST 216
>U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical
protein R09F10.1 protein.
Length = 383
Score = 35.9 bits (79), Expect = 0.023
Identities = 32/121 (26%), Positives = 58/121 (47%)
Frame = +1
Query: 211 KEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDML 390
++ ++ F L+ Y S E +R +I+ + I + ++ +GL L +N++ D
Sbjct: 79 EQMFNDFILKFDRKYTSVEEFEYRYQIFLRNV-IEFEAEEERNLGL---DLDVNEFTDWT 134
Query: 391 HHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQG 570
E K + NK K++ + GS I PA++ DWR+ G +T IK+QG
Sbjct: 135 DEELQKMVQE-NKYTKYDFDTPKFEGSYLETGVIRPASI------DWREQGKLTPIKNQG 187
Query: 571 E 573
+
Sbjct: 188 Q 188
Score = 29.5 bits (63), Expect = 2.0
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +2
Query: 560 RTKGKCGSCWSFSTTGA 610
+ +G+CGSCW+F+T +
Sbjct: 184 KNQGQCGSCWAFATVAS 200
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 303 QAHHRQTQPEVRNGPRFLQAGHEQ-VRRHAPPRVREDY 413
Q HH+Q Q ++ PR + H Q RRH P DY
Sbjct: 187 QQHHQQQQQQLAFRPRHRSSHHHQEPRRHRAPSPDPDY 224
>Z81103-3|CAB03209.1| 467|Caenorhabditis elegans Hypothetical
protein M04G12.2 protein.
Length = 467
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2
Query: 575 CGSCWSFSTTGA 610
CGSCW F TTGA
Sbjct: 248 CGSCWVFGTTGA 259
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -1
Query: 463 PSCTDSCCVWQFCXXXXXXXRTRGGACLRTCS--CPACKK-RGPFRTSGCVWR*CACAQR 293
P C SC Q C + AC ++CS C A + + P +T C+C Q
Sbjct: 357 PQCQQSC--QQQCVQQQQPMQQCAPACTQSCSQSCSAAQPAQMPCQTQSV--NSCSCQQN 412
Query: 292 ISSCGN 275
S CGN
Sbjct: 413 YSPCGN 418
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -1
Query: 463 PSCTDSCCVWQFCXXXXXXXRTRGGACLRTCS--CPACKK-RGPFRTSGCVWR*CACAQR 293
P C SC Q C + AC ++CS C A + + P +T C+C Q
Sbjct: 357 PQCQQSC--QQQCVQQQQPMQQCAPACTQSCSQSCSAAQPAQMPCQTQSV--NSCSCQQN 412
Query: 292 ISSCGN 275
S CGN
Sbjct: 413 YSPCGN 418
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -1
Query: 463 PSCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPACKKRGPFRTSGCVWR*---CACAQR 293
P C SC Q C + AC ++CS +C P + C+ + C+C Q
Sbjct: 504 PQCQQSC--QQQCIQQLQPIQQCATACTQSCS-QSCSAAQPAQMP-CITQSANSCSCQQN 559
Query: 292 ISSCGN 275
S CGN
Sbjct: 560 YSPCGN 565
>AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical
protein Y40H7A.10 protein.
Length = 343
Score = 29.1 bits (62), Expect = 2.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 566 KGKCGSCWSFSTTGA 610
+G CGSCW+F+T A
Sbjct: 156 QGPCGSCWAFATAAA 170
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 437 LAVLLKPFIVFTNSWWSMSPYLFMPSL*ETR-PISYFWL 324
+ ++L PF+ + N+WWS + + + L ISYF+L
Sbjct: 408 IGMILAPFLTYANTWWSPAVNVTVIVLGSANLLISYFFL 446
>Z81531-8|CAB04322.2| 344|Caenorhabditis elegans Hypothetical
protein F36D3.9 protein.
Length = 344
Score = 28.3 bits (60), Expect = 4.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 560 RTKGKCGSCWSFST 601
R + CGSCW+FST
Sbjct: 121 REQSNCGSCWAFST 134
>AF067607-6|AAY86221.1| 461|Caenorhabditis elegans Hypothetical
protein C18H7.11 protein.
Length = 461
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 590 TSMSHTSPWSLMSVTAPCFLQSTCSGSFTLAGDMNLAPRTLPPFMYR 450
T+++ T+P ++ VT+ + +T G+FT G M L F+YR
Sbjct: 413 TTVTQTTPSTVGQVTSTAPVITTTKGAFTGFGAMELLILLFSVFLYR 459
>AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical
protein Y113G7B.15 protein.
Length = 328
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 515 RSRWTGGSTAPSPTSRTKGKCGSCWSFSTT 604
R + GS P + + +CG CW+F+TT
Sbjct: 104 RDIYVDGSPVVGPV-KDQEQCGCCWAFATT 132
>Z81063-2|CAB02959.1| 823|Caenorhabditis elegans Hypothetical
protein F15D3.4 protein.
Length = 823
Score = 27.5 bits (58), Expect = 8.0
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Frame = +1
Query: 247 LNYESEVEDNFR--MKIYAE-HKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMN 417
LN E E F ++++ E KH+ HN+ + SY G + G M HH F +
Sbjct: 439 LNLHFEAEKLFEGCVRVFTELPKHLW--HNEDIRIIQNSYYGGKSLRGAMQHHCFATDPD 496
Query: 418 GFNKTAKHNKNLYMKGGSVRGA-KFISPANVKLPEQVDWRKHGAVTDIKDQGEVW 579
G + N+ + + S GA F+ P N +WR A+ D W
Sbjct: 497 GLYSCHRINEEVAL---STHGAVNFVVPEN----HAPNWRASIALVSAMDCTFYW 544
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 273 QFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQTQQ 446
Q P + + Q H QP+ P+ Q H+ V+ H+P ++ ++ Q Q QQ
Sbjct: 462 QHPQQQQQQQQYHQMPPQPQHSPYPQQQQMHHQMVQ-HSPHHYQQQQQQQQYQQQHQQ 518
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,360,323
Number of Sequences: 27780
Number of extensions: 281180
Number of successful extensions: 1046
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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