Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c18f
(613 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 1.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.8
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 3.1
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 4.1
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 7.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 7.2
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 7.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.2
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.5
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 21 9.5
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 1.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 344 PISYFWLCLAMMCLCSAYIFM 282
P+SY A M +C+ ++FM
Sbjct: 300 PVSYLKAVDAFMSVCTVFVFM 320
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +3
Query: 357 QAGHEQVRRHAPPRVREDYERLQQNCQTQQESVHEGWER 473
Q+ H Q + A P+ ++ ++ Q Q QQ+ + +R
Sbjct: 818 QSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQQQQQQQQR 856
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 490 ISPANVKLPEQVDWRK 537
+ P+N KLP +W+K
Sbjct: 385 LDPSNRKLPAPANWKK 400
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 382 DMLHHEFVKTMNGFNKTAKHNKNLYMKGG 468
D H+ + NG + T HN+ L GG
Sbjct: 395 DSARHQRIGGCNGLHTTTAHNRFLGGIGG 423
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G + PR +PP YRF
Sbjct: 145 FRHIGPLTPFPRFIPPNAYRF 165
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G + PR +PP YRF
Sbjct: 386 FRHIGPLTPFPRFIPPNAYRF 406
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 7.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP +YRF
Sbjct: 367 FRYIGPPTPFPRFIPPNVYRF 387
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +3
Query: 360 AGHEQVRRHAPPRVREDYERLQQNCQTQQESVHEGWER 473
AG++ RRH V E Y+ N + ++ +R
Sbjct: 26 AGYKHSRRHRDFTVAESYDASSSNSDSLSMTIPPSIDR 63
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 148 FRYIGPSTPFPRFIPPNAYRF 168
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 148 FRYIGPSTPFPRFIPPNAYRF 168
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 148 FRYIGPSTPFPRFIPPNAYRF 168
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 148 FRYIGPSTPFPRFIPPNAYRF 168
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 148 FRYIGPSTPFPRFIPPNAYRF 168
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 148 FRYIGPSTPFPRFIPPNAYRF 168
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 148 FRYIGPSTPFPRFIPPNAYRF 168
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 148 FRYIGPSTPFPRFIPPNAYRF 168
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 148 FRYIGPSTPFPRFIPPNAYRF 168
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 364 FRYIGPSTPFPRFIPPNAYRF 384
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 375 FRYIGPSTPFPRFIPPNAYRF 395
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 375 FRYIGPPTSFPRFIPPNAYRF 395
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 375 FRYIGPPTSFPRFIPPNAYRF 395
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 375 FRYIGPPTSFPRFIPPNAYRF 395
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 364 FRYIGPPTSFPRFIPPNAYRF 384
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 381 FRYIGPSTPFPRFIPPNAYRF 401
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 509 FTLAGDMNLAPRTLPPFMYRF 447
F G PR +PP YRF
Sbjct: 381 FRYIGPSTPFPRFIPPNAYRF 401
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 249 QLRKRGRRQFPHEDIR*AQAHHRQTQPE 332
Q+R+R R Q H D +Q +Q Q +
Sbjct: 71 QMREREREQREHSDRVTSQQQQQQQQQQ 98
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,317
Number of Sequences: 438
Number of extensions: 3466
Number of successful extensions: 63
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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