Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c13r
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 226 1e-59
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 226 1e-59
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 216 1e-56
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 215 3e-56
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 213 8e-56
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 210 8e-55
U80451-10|AAB37844.1| 106|Caenorhabditis elegans Hypothetical p... 75 4e-14
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 30 1.9
Z82072-2|CAB04921.1| 329|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81029-8|CAB02702.1| 329|Caenorhabditis elegans Hypothetical pr... 29 4.4
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 226 bits (552), Expect = 1e-59
Identities = 103/161 (63%), Positives = 124/161 (77%)
Frame = -1
Query: 593 LQXANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIE 414
LQ ANACR+WP GRGI+HN KTFL+WCNEEDHLRIISMQ GG++ QV +RL+ V IE
Sbjct: 199 LQAANACRYWPKGRGIFHNNQKTFLIWCNEEDHLRIISMQEGGNVGQVLERLIKGVKTIE 258
Query: 413 KKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGE 234
K+ PFS DRLG+LTFCP+NLGTTVRASVHI + + LQ+RG GE
Sbjct: 259 KQAPFSRDDRLGWLTFCPSNLGTTVRASVHI-RLPKISAKPDFKSICDGLKLQIRGIHGE 317
Query: 233 HTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEKS 111
H+E+EGGVYDISNK R+GLTE++AVK+MYDGIA LI +EK+
Sbjct: 318 HSESEGGVYDISNKARLGLTEFEAVKQMYDGIAHLIALEKA 358
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -3
Query: 699 EXELXGTXYPLTGMSKETQQQLIDDHFLFKEGDRFL 592
+ EL G +PL GM+KE Q QLI DHFLFKEGDRFL
Sbjct: 164 DPELAGKYFPLDGMTKEIQDQLIKDHFLFKEGDRFL 199
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 226 bits (552), Expect = 1e-59
Identities = 103/161 (63%), Positives = 124/161 (77%)
Frame = -1
Query: 593 LQXANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIE 414
LQ ANACR+WP GRGI+HN KTFL+WCNEEDHLRIISMQ GG++ QV +RL+ V IE
Sbjct: 236 LQAANACRYWPKGRGIFHNNQKTFLIWCNEEDHLRIISMQEGGNVGQVLERLIKGVKTIE 295
Query: 413 KKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGE 234
K+ PFS DRLG+LTFCP+NLGTTVRASVHI + + LQ+RG GE
Sbjct: 296 KQAPFSRDDRLGWLTFCPSNLGTTVRASVHI-RLPKISAKPDFKSICDGLKLQIRGIHGE 354
Query: 233 HTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEKS 111
H+E+EGGVYDISNK R+GLTE++AVK+MYDGIA LI +EK+
Sbjct: 355 HSESEGGVYDISNKARLGLTEFEAVKQMYDGIAHLIALEKA 395
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -3
Query: 699 EXELXGTXYPLTGMSKETQQQLIDDHFLFKEGDRFL 592
+ EL G +PL GM+KE Q QLI DHFLFKEGDRFL
Sbjct: 201 DPELAGKYFPLDGMTKEIQDQLIKDHFLFKEGDRFL 236
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 216 bits (528), Expect = 1e-56
Identities = 99/160 (61%), Positives = 122/160 (76%)
Frame = -1
Query: 593 LQXANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIE 414
LQ ANAC FWP GRGI+HN +KTFL+W NEEDH+RIISMQ G D+ V RL+ V IE
Sbjct: 238 LQYANACNFWPKGRGIFHNNDKTFLIWVNEEDHMRIISMQEGSDVGAVLDRLIKGVRGIE 297
Query: 413 KKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGE 234
K++PFS DRLG+LTFCPTNLG+TVRASVHI + E+ K +LQVRG GE
Sbjct: 298 KQVPFSRDDRLGWLTFCPTNLGSTVRASVHIALPKLAARKDFI-EICEKLNLQVRGIHGE 356
Query: 233 HTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEK 114
H+E+ GGVYDISNK R+GL+EY AVK+MYDG+ +LI++E+
Sbjct: 357 HSESVGGVYDISNKARLGLSEYQAVKQMYDGVKKLIEMEE 396
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -3
Query: 699 EXELXGTXYPLTGMSKETQQQLIDDHFLFKEGDRFL 592
+ EL G YPL GM K+TQ+QLI DHFLFKEGDR L
Sbjct: 203 DKELKGKYYPLDGMGKDTQKQLIADHFLFKEGDRHL 238
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 215 bits (525), Expect = 3e-56
Identities = 98/160 (61%), Positives = 122/160 (76%)
Frame = -1
Query: 593 LQXANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIE 414
LQ ANAC FWP GRGI+HN +KTFL+W NEEDH+RIISMQ G D+ V RL+ V IE
Sbjct: 266 LQYANACNFWPKGRGIFHNNDKTFLIWVNEEDHMRIISMQEGSDVGAVLDRLIKGVRGIE 325
Query: 413 KKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGE 234
K++PFS DRLG+LTFCPTNLG+TVRASVHI + E+ K +LQVRG GE
Sbjct: 326 KQVPFSRDDRLGWLTFCPTNLGSTVRASVHIALPKLAARKDFI-EICEKLNLQVRGIHGE 384
Query: 233 HTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEK 114
H+++ GGVYDISNK R+GL+EY AVK+MYDG+ +LI++E+
Sbjct: 385 HSDSVGGVYDISNKARLGLSEYQAVKQMYDGVKKLIEMEE 424
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = -3
Query: 699 EXELXGTXYPLTGMSKETQQQLIDDHFLFKEGDRFL 592
+ EL G YPL GM K+TQ+QLI DHFLFKEGDR L
Sbjct: 231 DKELKGKYYPLDGMGKDTQKQLIADHFLFKEGDRHL 266
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 213 bits (521), Expect = 8e-56
Identities = 97/160 (60%), Positives = 121/160 (75%)
Frame = -1
Query: 593 LQXANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIE 414
LQ ANAC FWP GRGI+HN KTFL+W NEEDHLRIISMQ G D+ V +RL+ V IE
Sbjct: 211 LQYANACNFWPKGRGIFHNNKKTFLIWVNEEDHLRIISMQEGSDVGAVLERLIKGVRGIE 270
Query: 413 KKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGE 234
K++ FS DRLG+LTFCPTNLG+TVRASVHI +++ K LQ+RG GE
Sbjct: 271 KQVQFSRDDRLGWLTFCPTNLGSTVRASVHI-ALPKLSAREDFKQICDKLDLQLRGIHGE 329
Query: 233 HTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEK 114
H+E+EGGVYDISN+ R+GL+EY+AVK+MYDG+ LI++E+
Sbjct: 330 HSESEGGVYDISNRARLGLSEYEAVKKMYDGVKNLIEMEE 369
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = -3
Query: 699 EXELXGTXYPLTGMSKETQQQLIDDHFLFKEGDRFL 592
+ EL GT YPL GMSK+TQ QLI DHFLFKEGDR L
Sbjct: 176 DEELKGTYYPLDGMSKDTQNQLIADHFLFKEGDRHL 211
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 210 bits (513), Expect = 8e-55
Identities = 95/161 (59%), Positives = 123/161 (76%)
Frame = -1
Query: 593 LQXANACRFWPTGRGIYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIE 414
L+ ANA R+WP GRGI+HNE KTFLVW NEEDHLRIISMQ GG++ +V RL+ +N +
Sbjct: 199 LKAANANRYWPNGRGIFHNEKKTFLVWVNEEDHLRIISMQNGGNVGEVLARLIKGLNLVA 258
Query: 413 KKIPFSHHDRLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGE 234
K PF+ H RLG+LTFCPTNLGTTVRASVHI +++ S LQ+RG GE
Sbjct: 259 AKAPFARHPRLGWLTFCPTNLGTTVRASVHI-KLPKISAKDDFKKICSDMKLQIRGIHGE 317
Query: 233 HTEAEGGVYDISNKRRMGLTEYDAVKEMYDGIAELIKIEKS 111
H+E++ G+YDISNK+R+GLTEY AV++MYDG+ +LI++EK+
Sbjct: 318 HSESKEGIYDISNKQRLGLTEYQAVRQMYDGLKKLIELEKA 358
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = -3
Query: 699 EXELXGTXYPLTGMSKETQQQLIDDHFLFKEGDRFL 592
+ EL GT YPLTGM +ET+++LI DHFLFKEGDRFL
Sbjct: 164 DPELKGTYYPLTGMDEETKKKLIADHFLFKEGDRFL 199
>U80451-10|AAB37844.1| 106|Caenorhabditis elegans Hypothetical
protein F11G11.13 protein.
Length = 106
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/76 (43%), Positives = 55/76 (72%)
Frame = -1
Query: 347 TTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVYDISNKRRMGLTEY 168
T++++SVHI +++ S+ LQ+RG GE+++ + G+YDISNK+R+GLTEY
Sbjct: 24 TSLKSSVHIKLPKISAKDDF-KKICSEMKLQIRGIHGEYSDLKEGIYDISNKQRLGLTEY 82
Query: 167 DAVKEMYDGIAELIKI 120
AV++MYDG+ +LI++
Sbjct: 83 QAVRQMYDGLKKLIEL 98
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 456 AGIQEAGERRQRDREEDPVLAPRPARLPHVLPDQ 355
AG E E++ + E DP PRP P P+Q
Sbjct: 279 AGDHERKEKKPKKEERDPAAPPRPRGRPPKTPEQ 312
>Z82072-2|CAB04921.1| 329|Caenorhabditis elegans Hypothetical
protein W05H12.2 protein.
Length = 329
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 404 PFSHHDRLGFLTFCPTNLGTTVRASVH 324
P H DRL LTFC + T V +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220
>Z81029-8|CAB02702.1| 329|Caenorhabditis elegans Hypothetical
protein W05H12.2 protein.
Length = 329
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 404 PFSHHDRLGFLTFCPTNLGTTVRASVH 324
P H DRL LTFC + T V +H
Sbjct: 194 PVRHRDRLALLTFCDIDTQTIVLWRIH 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,423,793
Number of Sequences: 27780
Number of extensions: 177100
Number of successful extensions: 669
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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