Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c13f
(641 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 153 9e-38
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 107 8e-24
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 4e-23
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 4e-21
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 6e-21
SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 54 7e-08
SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13) 52 5e-07
SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08) 52 5e-07
SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 51 9e-07
SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15) 42 4e-04
SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4) 32 0.46
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 29 2.4
SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16) 28 5.6
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6) 28 5.6
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06) 28 5.6
SB_3| Best HMM Match : Peptidase_C21 (HMM E-Value=5) 28 5.6
SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12) 28 7.4
SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11) 28 7.4
SB_11767| Best HMM Match : Kinesin (HMM E-Value=0) 28 7.4
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 7.4
SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24) 28 7.4
SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23) 28 7.4
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 27 9.8
SB_31879| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4) 27 9.8
SB_25245| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_5521| Best HMM Match : SWIM (HMM E-Value=6.9) 27 9.8
SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_41278| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4) 27 9.8
SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027) 27 9.8
SB_26005| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10) 27 9.8
SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 27 9.8
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 153 bits (372), Expect = 9e-38
Identities = 79/161 (49%), Positives = 102/161 (63%), Gaps = 1/161 (0%)
Frame = +2
Query: 161 VDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 337
++ A +E+ F + L+ + KSLLKKYLT +VF+SLK KKTS G+ L DCI SGV NL
Sbjct: 614 IERAAIEEAHLKFPEDLKKPEVKSLLKKYLTEDVFNSLKEKKTSRGAGLYDCINSGVVNL 673
Query: 338 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVV 517
DSG G+YA D E Y VF ELFD IIEDYH +K + H + NLD G F+
Sbjct: 674 DSGTGVYAADEECYEVFGELFDKIIEDYHAPYKLEENHKSDMDPEKVDAPNLDAEGAFIR 733
Query: 518 STRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGE 640
STR+R R+L+GY P LT + ++E KV G L+SL G+
Sbjct: 734 STRIRVARNLKGYALTPGLTRKERVDVESKVVGVLNSLTGD 774
Score = 153 bits (370), Expect = 2e-37
Identities = 78/161 (48%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
Frame = +2
Query: 161 VDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 337
++ A +E F + L+ + KSL+KKYLT E+F+ LK+KKT G TL DCI SGVENL
Sbjct: 182 IEKAAVEAKRNVFPEVLKKPEVKSLMKKYLTEEMFNELKDKKTELGVTLSDCINSGVENL 241
Query: 338 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVV 517
DSG GIYA D ESY +FA LFD IIEDYH +K KH + +LDP G F+
Sbjct: 242 DSGTGIYAGDEESYKLFAPLFDKIIEDYHAPYKLEQKHTSDMNPEKVEAPDLDPEGSFIR 301
Query: 518 STRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGE 640
STR+R R+L+GY P L++ E+E+KV SL G+
Sbjct: 302 STRIRVARNLKGYALTPALSKKARLEIEEKVKNVFESLTGD 342
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 107 bits (257), Expect = 8e-24
Identities = 72/193 (37%), Positives = 102/193 (52%), Gaps = 28/193 (14%)
Frame = +2
Query: 146 KAATMVDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTL------ 304
K+ ++ A +EK + F + L + KSLLKKYLT E+F+SLK+KKT+ G +L
Sbjct: 337 KSLLEIERAAIEKQRSVFPEALNKEECKSLLKKYLTAEMFNSLKDKKTAKGISLYDCINS 396
Query: 305 ----------------LDCIQSGVENLDSGVG-----IYAPDAESYSVFAELFDPIIEDY 421
L+CI+ ++ V + D ESYS+F+ LFD I+E Y
Sbjct: 397 GVVNLDSSCGVYAGQRLECIRHIANSISVRVADVFYHLSTGDEESYSLFSPLFDKIVEHY 456
Query: 422 HNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEME 601
H +K DKH + T NLDP G F+ STR+R R+L+GY P LT + E+E
Sbjct: 457 HAPYKLADKHTSDMNPEKVTAPNLDPDGVFIRSTRIRVARNLKGYALTPGLTRKERNEIE 516
Query: 602 DKVSGTLSSLEGE 640
KV+ L SL G+
Sbjct: 517 KKVTEVLCSLTGD 529
Score = 86.6 bits (205), Expect = 2e-17
Identities = 61/150 (40%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Frame = +2
Query: 158 MVDAATLEKLEAGFS-----KLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQS 322
M DAA EK + + K + K LLKKYLT +VFD LK KKT G
Sbjct: 8 MADAAEAEKYRSKNAYPVPLKSAKCNPKCLLKKYLTNQVFDQLKTKKTKRGDGGCSDGGG 67
Query: 323 GVENLDSGVGIYAP---------DAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDV 475
G ++D G Y D ESY+VFA LFD +IEDYH+ +K D H D
Sbjct: 68 GGGDVDDDDGEYIDADVAVVIVGDEESYTVFAPLFDKVIEDYHSPYKLKDGHTSDMNPDR 127
Query: 476 DTLGNLDPAGEFVVSTRVRCGRSLEG--YP 559
+LDP F+ STR+R GR L G YP
Sbjct: 128 VNAPDLDPDNRFIRSTRIRVGRDLAGKYYP 157
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 105 bits (251), Expect = 4e-23
Identities = 59/142 (41%), Positives = 85/142 (59%), Gaps = 4/142 (2%)
Frame = +2
Query: 227 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAE 394
+L+ K+LT ++ L++K T G TL IQ+GV+N S VG+ A D ESY FAE
Sbjct: 61 NLMAKHLTPRLYVKLRDKSTPNGYTLDQAIQTGVDNPGHPFISTVGLVAGDEESYDTFAE 120
Query: 395 LFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCL 574
LFDP+IE+ H+GFKK+DKH G D ++V+S+RVR GRS+ G+ P
Sbjct: 121 LFDPVIEERHSGFKKSDKHKTDLDSSKIRGGKFDE--KYVLSSRVRTGRSIRGFSLPPHC 178
Query: 575 TESQYKEMEDKVSGTLSSLEGE 640
T ++ +E+E V+ L L G+
Sbjct: 179 TRAERREVERIVNDALDGLGGD 200
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 104 bits (250), Expect = 5e-23
Identities = 61/140 (43%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Frame = +2
Query: 233 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 400
+ K LT+E++ SL++K T G TL D IQ+GV+N VG A D ESY VFAEL
Sbjct: 2323 MAKVLTKEIYRSLRDKSTKNGFTLDDIIQTGVDNPGHPFIMTVGCVAGDEESYDVFAELL 2382
Query: 401 DPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 580
DP+IE H G+KKTDKH D G LDP ++V+S+RVR GRS+ G+ P +
Sbjct: 2383 DPVIELRHGGYKKTDKHKTDLNPDNLKGGALDP--KYVLSSRVRTGRSIRGFCLPPHCSR 2440
Query: 581 SQYKEMEDKVSGTLSSLEGE 640
++ + +E L+ L+GE
Sbjct: 2441 AERRSVEKISVDALAKLDGE 2460
>SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 103 bits (246), Expect = 2e-22
Identities = 62/144 (43%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
Frame = +2
Query: 224 KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAP---------DAES 376
K LLKKYLT +VFD LK KKT G G ++D G Y D ES
Sbjct: 174 KCLLKKYLTNQVFDQLKTKKTKRGDGGCSDGGGGGGDVDDDDGEYIDADVAVVIVGDEES 233
Query: 377 YSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGY 556
Y+VFA LFD +IEDYH+ +K D H D +LDP F+ STR+R GR+L+GY
Sbjct: 234 YTVFAPLFDKVIEDYHSPYKLKDGHTSDMNPDRVNAPDLDPDNRFIRSTRIRVGRNLKGY 293
Query: 557 PFNPCLTESQYKEMEDKVSGTLSS 628
P LT+ + E+E K S T S
Sbjct: 294 GLAPSLTKKERVELEKKASFTAKS 317
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 98.7 bits (235), Expect = 4e-21
Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 7/201 (3%)
Frame = +2
Query: 56 RSFKMNYKLKVTIPVVVCG--GAVLAYYIMRRKAATMVDAATLEKLEAGFSKLQGSD-SK 226
++ ++N +K I VV G ++ + + + + A +K + ++ G + ++
Sbjct: 705 KALEINVNVKSFIHSVVAGKKARMIVESVSKAREEAIKKEAERQKASSTLRRVPGPEQAQ 764
Query: 227 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSG----VGIYAPDAESYSVFAE 394
+ K+LTR+V++ L N KT G TL IQ+GV+N VG A D E+Y VFA
Sbjct: 765 HYMAKFLTRDVYNKLCNLKTPSGFTLDGVIQTGVDNPGHPFIFTVGCVAGDEETYKVFAA 824
Query: 395 LFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCL 574
L DP+IE HNG+ K KH D + +G D FV+S RVR GRS+ G P
Sbjct: 825 LLDPVIEARHNGYLKGAKHVTDLNPD-NLVGGDDLDANFVLSCRVRTGRSIRGLGLPPHC 883
Query: 575 TESQYKEMEDKVSGTLSSLEG 637
T ++ +E+E L++L+G
Sbjct: 884 TRAERREVEKITVDALATLDG 904
Score = 96.3 bits (229), Expect = 2e-20
Identities = 56/140 (40%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Frame = +2
Query: 233 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 400
+ K +T++V+ L N +T G TL IQ+GV+N VG A D ESY VFA++F
Sbjct: 1 MAKCMTKDVYQRLSNLRTPSGYTLDMAIQTGVDNPGHPFIMTVGCVAGDEESYDVFADMF 60
Query: 401 DPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 580
DP+IE H+G++KTD H D +G D ++V+S RVR GRS+ G P T
Sbjct: 61 DPVIEKRHDGYRKTDMHKTDLNPD-HLIGGDDLDEKYVLSCRVRTGRSIRGLGLPPHCTR 119
Query: 581 SQYKEMEDKVSGTLSSLEGE 640
++ +E+E L SL+GE
Sbjct: 120 AERREVEKVSVEALDSLDGE 139
Score = 94.7 bits (225), Expect = 6e-20
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Frame = +2
Query: 233 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 400
+ K LT V++ L KT G TL IQ+GV+N VG A D ESY VFA++F
Sbjct: 370 MAKCLTPAVYNMLSVLKTPTGYTLDMAIQTGVDNPGHPFIMTVGCVAGDEESYDVFADMF 429
Query: 401 DPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 580
DP+IE HNG+KKT KH + + +G D ++V+S RVR GRS+ G P +
Sbjct: 430 DPVIEKRHNGYKKTAKH-KTDLNPSNLIGGDDLDEKYVLSCRVRTGRSIRGLCLPPWCSR 488
Query: 581 SQYKEMEDKVSGTLSSLEG 637
++ +E+E V+ L+ L+G
Sbjct: 489 AERREVEKIVTSALAELDG 507
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 97.9 bits (233), Expect = 6e-21
Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Frame = +2
Query: 233 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 400
+ ++L+ ++ LK+K T G TL IQ+GV+N S VG+ A D ESY VFA+LF
Sbjct: 404 MARHLSPRLYTKLKDKVTPNGYTLDMAIQTGVDNPGHPFISTVGLVAGDEESYDVFADLF 463
Query: 401 DPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 580
DP+IE+ HNG+KKTDKH G+ D +V+STR R GRS+ G+ P T
Sbjct: 464 DPVIEERHNGYKKTDKHVTDLNHRKLKGGSFDE--RYVLSTRCRTGRSIRGFSLPPHCTR 521
Query: 581 SQYKEMEDKVSGTLSSLEGE 640
++ + +E V L L G+
Sbjct: 522 AERRSVEKVVVDALDQLGGD 541
>SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 309
Score = 54.4 bits (125), Expect = 7e-08
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +2
Query: 347 VGIYAPDAESYSVFAELFDPIIEDYHNGFK-KTDKHPPKNWGDVDTLGNLDPAGEFVVST 523
+G +A D ESY F + + P+I+ YH GF T KH + + D A ++ST
Sbjct: 1 MGCHAGDKESYDDFKDFYYPVIQAYHKGFDINTSKHVTDMDPEKISTELSDSAKAKIIST 60
Query: 524 RVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL 631
R+R R+L +P NP ++ E+ D ++ SL
Sbjct: 61 RIRVARNLSMFPLNPGGSKESRLEIIDLMAKVYDSL 96
>SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13)
Length = 490
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +2
Query: 206 LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSV 385
LQ + K++ ++L +++ K+ KT +G L D + V D+ +GI A D E Y
Sbjct: 63 LQQKNRKTVASQFLNEAIYEEYKDAKTVYGFRLFDILSYDVSYRDT-IGIRATDEECYYT 121
Query: 386 FAELFDPIIEDY 421
F +LFDP+I ++
Sbjct: 122 FIKLFDPVISNF 133
Score = 34.7 bits (76), Expect = 0.065
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2
Query: 473 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLE 634
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L SL+
Sbjct: 279 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQALDSLK 329
>SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08)
Length = 322
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +2
Query: 206 LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSV 385
LQ + K++ ++L +++ K+ KT +G L D + V D+ +GI A D E Y
Sbjct: 54 LQQKNRKTVASQFLNEAIYEEYKDAKTVYGFRLFDILSYDVSYRDT-IGIRATDEECYYT 112
Query: 386 FAELFDPIIEDY 421
F +LFDP+I ++
Sbjct: 113 FIKLFDPVISNF 124
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +2
Query: 473 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEG 637
V G LD VVS RVR RSL+G+PF + ++ +E+++ V L SL+G
Sbjct: 270 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQALDSLKG 321
>SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 383
Score = 50.8 bits (116), Expect = 9e-07
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 308 DCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK-KTDKHPPKNWGDVDTL 484
D SG I D ESY F + + P+I+ YH GF T KH + +
Sbjct: 80 DTKSSGPAKWTLARAINTGDKESYDDFKDFYYPVIQAYHKGFDINTSKHVTDMDPEKIST 139
Query: 485 GNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL 631
D A ++STR+R R+L +P NP ++ E+ D ++ SL
Sbjct: 140 ELSDSAKAKIISTRIRVARNLSMFPLNPGGSKESRLEIIDLMAKVYDSL 188
>SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15)
Length = 132
Score = 41.9 bits (94), Expect = 4e-04
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Frame = +2
Query: 65 KMNYKLKVTIPVVVCGGAVLAYYIMRRKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKY 244
K+N K +V + G A L Y I + K+ + A E L A F L ++ ++ ++
Sbjct: 27 KLNDK-RVAVAGAGLGVAWLCYIIKQTKSQSKYMALREEAL-ANFPALWNHNN--IMARH 82
Query: 245 LTREVFDSLKNKKTSFGSTLLDCIQSGVENLD----SGVGIYAPDAESY 379
LT E++ L ++KTS G TL IQ GV+N S GI A D ES+
Sbjct: 83 LTPEMYVHLCDRKTSNGFTLDQAIQPGVDNPTHPNISPCGIVAGDEESF 131
>SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4)
Length = 242
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 282 RPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSP 392
RPH+DP TWTP +T P+RTP P
Sbjct: 175 RPHTDPTQTPHGPHTDPTWTPHRPNT--DPTRTPHGP 209
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.9 bits (69), Expect = 0.46
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +3
Query: 150 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 329
P STP S T S ++P ST P S P + +A + S
Sbjct: 255 PSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTP-STPSTPSAPSTPS 313
Query: 330 RTWTPASVSTRRTPSRTPCSPS 395
TP++ ST +TPS TPC+P+
Sbjct: 314 TPSTPSTPSTPKTPS-TPCTPN 334
Score = 31.9 bits (69), Expect = 0.46
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +3
Query: 150 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 329
P STP S T S ++P ST P S P + +A + S
Sbjct: 805 PSMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTP-STPSTPSAPSTPS 863
Query: 330 RTWTPASVSTRRTPSRTPCSPS 395
TP++ ST +TPS TPC+P+
Sbjct: 864 TPSTPSTPSTPKTPS-TPCTPN 884
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/82 (34%), Positives = 35/82 (42%)
Frame = +3
Query: 150 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 329
P STP R S S T S + P ST T HS P + + + S
Sbjct: 18 PSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTP-STPCTHSTPSAPSTPSTPS 76
Query: 330 RTWTPASVSTRRTPSRTPCSPS 395
TP++ ST TPS TP +PS
Sbjct: 77 TPCTPSTPSTPSTPS-TPSTPS 97
Score = 28.3 bits (60), Expect = 5.6
Identities = 28/82 (34%), Positives = 34/82 (41%)
Frame = +3
Query: 150 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 329
P STP S S T S PG ST P + +T S +S
Sbjct: 132 PSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTP---STPSAPGTPITPST-LS 187
Query: 330 RTWTPASVSTRRTPSRTPCSPS 395
TP++ STR TPS TP +PS
Sbjct: 188 TPSTPSTPSTRSTPS-TPSTPS 208
Score = 28.3 bits (60), Expect = 5.6
Identities = 27/82 (32%), Positives = 35/82 (42%)
Frame = +3
Query: 150 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVS 329
P STP + + S T S PG ST P + +T S +S
Sbjct: 682 PSTPSTPSTPSTPSMPNTPSTPSTPSTPSTPITPGTPSTP---STPSAPGTPITPST-LS 737
Query: 330 RTWTPASVSTRRTPSRTPCSPS 395
TP++ STR TPS TP +PS
Sbjct: 738 TPSTPSTPSTRSTPS-TPSTPS 758
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 249 PGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPS 395
P +ST P S P + + + S T TP++ ST TPS TP +PS
Sbjct: 425 PCTHSTPGTPSTP-STPSTPSTPSTPSLTHTPSTPSTPSTPS-TPSTPS 471
Score = 27.5 bits (58), Expect = 9.8
Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +3
Query: 150 PQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYST--A*RTKRPHSDPPSLTASNR 323
P STP S S T S + P ST A T S P + +A
Sbjct: 467 PSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPGT 526
Query: 324 VSRTWTPASVSTRRTPSRTPCSPS 395
S TP++ ST TPS TP +PS
Sbjct: 527 PSTPSTPSTPSTPSTPS-TPSTPS 549
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 137 MRRKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 316
++ KAA + + L KL AG++ L D+ L + LT E LK K S + +
Sbjct: 192 LQAKAAVQLLKSVLPKLTAGYADLYHGDA---LVEVLTTEWHGDLKEKYPQDVSGIYQLV 248
Query: 317 QSGVENLD 340
Q +E+ D
Sbjct: 249 QGQLESRD 256
>SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16)
Length = 411
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 297 PPSLTASNRVSRTWTPASVSTRRTPSRTP 383
P ++ S RV+ T +P +S R TP +TP
Sbjct: 275 PGPVSVSPRVATTHSPPPISPRVTPEKTP 303
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 561 KGYPSSERPQRTRVETTNS-PAGSRLPSVSTSP 466
+G SSERP+R+R T + P S LP +++P
Sbjct: 1178 RGSLSSERPERSRRRRTETEPRDSSLPCTASTP 1210
>SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6)
Length = 277
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = -2
Query: 277 VLQAVEYFPGKVLLQQRLRVGSLELAETSLQFLEGCGVDH 158
+ +AV P +V+L R+++GS +LA+ L+ L+G G++H
Sbjct: 204 ITRAVIDGPLRVVL--RVQIGSCDLADEHLRKLDGGGLEH 241
>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
Length = 362
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 351 PTPESKFSTPDWMQSRRVDPNEVFLFFRLSNTS 253
P P+ KFS P + SR +D E L F L+ S
Sbjct: 5 PKPKEKFSEPVIIASRNLDSVEARLAFNLTTVS 37
>SB_3| Best HMM Match : Peptidase_C21 (HMM E-Value=5)
Length = 186
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 314 IQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNW-GDVDT 481
I +GV N + + E S+ F+P +DY NG++ TD H W G++ T
Sbjct: 72 IDAGVTNTTEHICVTDITYEQISI---TFEPY-QDYANGYRATDLHGKVAWVGELST 124
>SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12)
Length = 353
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 188 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 316
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 30 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 73
>SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 282 RPHSDPPSLTASNRVSRTWTPASVST--RRTPSRTPCSP 392
R HSDPP L + S +P+ +T R++ + CSP
Sbjct: 800 RKHSDPPPLPPRRKKSHEDSPSPCTTPRRKSTELSRCSP 838
>SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11)
Length = 809
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 312 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 199
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 65 QDRAADKNHVYISYR-DCKKLDEEAFPEDLDEAPWSVL 101
>SB_11767| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1230
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 353 IYAPDAESYSVFAELFDPIIEDYHNGFKKT-DKHPPKNWGDVDTLGNLDPAG 505
++ PDA V+ +P+++ G+ T + G T+G LD G
Sbjct: 635 VFQPDASQVEVYESCIEPLVKSCLEGYNATVFAYGQTGSGKTYTIGGLDTGG 686
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 285 PHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSP 392
PH++P TWTP +T P+RTP P
Sbjct: 120 PHTNPTQTPHGPHTDPTWTPHRPNT--DPTRTPHGP 153
>SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24)
Length = 398
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 188 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 316
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 75 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 118
>SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23)
Length = 417
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/93 (27%), Positives = 42/93 (45%)
Frame = +2
Query: 176 LEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGI 355
+ K + G+S G DS + R V SL + G+T ++ VE G +
Sbjct: 286 MSKEDCGWSYSGGEDSLCIKVSNQVRLVAVSLFGSE---GNTYT--VELAVEK--EGQQV 338
Query: 356 YAPDAESYSVFAELFDPIIEDYHNGFKKTDKHP 454
Y + ++S +EL +P Y+NGF + HP
Sbjct: 339 YQQEKRTFSS-SELMNPTNGSYYNGFVVSFDHP 370
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 156 QWSTPQPSRNWRL-VSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVSR 332
+W P PS N V SS DP L R S+ P + ++ + S+ PS +S R +
Sbjct: 851 EWRPPSPSPNTEADVKESSDDPPL-RQRTSSFPVEINSTYPPRYASSNSPSAPSSPRTTA 909
Query: 333 TWTPAS 350
++ A+
Sbjct: 910 SYGTAT 915
>SB_31879| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4)
Length = 200
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 312 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 199
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 145 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 181
>SB_25245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 312 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 199
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 101 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 137
>SB_5521| Best HMM Match : SWIM (HMM E-Value=6.9)
Length = 150
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 428 GFKKTDKHPPKNWGDVDTLGNLDPAGEF 511
G K + PP + G+ DT G D GEF
Sbjct: 9 GGSKGFRPPPYSCGEFDTRGEFDTCGEF 36
>SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 893
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 312 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 199
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 337 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 373
>SB_41278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 94 SGCSLRRCGPSLLHHEAKSRNNGRRR-NPREI 186
S C LR P + H+ +SRN+ RRR NP +
Sbjct: 42 SYCILRTTVPLCVKHQCQSRNSMRRRCNPSTV 73
>SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4)
Length = 432
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 312 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 199
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 145 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 181
>SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027)
Length = 381
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 312 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 199
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 189 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 225
>SB_26005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 312 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 199
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 101 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 137
>SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10)
Length = 734
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 312 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 199
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 605 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 641
>SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 675
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 312 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 199
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 119 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 155
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,987,979
Number of Sequences: 59808
Number of extensions: 364024
Number of successful extensions: 1379
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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