Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c13f
(641 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 27 0.50
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 25 2.0
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 25 2.7
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 4.7
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 6.2
AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. 23 8.2
AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical prote... 23 8.2
AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical prote... 23 8.2
AJ439061-1|CAD27770.1| 89|Anopheles gambiae hypothetical prote... 23 8.2
AF042732-3|AAC18058.1| 496|Anopheles gambiae diphenol oxidase-A... 23 8.2
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 27.1 bits (57), Expect = 0.50
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 356 YAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRV 529
+ P+ Y+ A L+DP I ++ K P + + +DP GEF + V
Sbjct: 2685 WEPETGLYNYRARLYDPDIGRFYQMDPKEQYPSPYVYAGNSPVSLIDPDGEFAFTLAV 2742
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 25.0 bits (52), Expect = 2.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 148 SRNNGRRRNPREIGGW 195
SR N RRR+PR G W
Sbjct: 253 SRRNPRRRSPRSGGRW 268
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 24.6 bits (51), Expect = 2.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 558 GYPSSERPQRTRVETTNSPAGSR 490
G S + PQR+ + T+SP GS+
Sbjct: 300 GSDSEDLPQRSAEDRTHSPVGSQ 322
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.8 bits (49), Expect = 4.7
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 356 YAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGE 508
+ P+ Y+ A L+DP I ++ K P + + +DP GE
Sbjct: 2675 WEPETGLYNYRARLYDPDIGRFYQMDPKEQYPSPYVYAGNSPVSLIDPDGE 2725
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.4 bits (48), Expect = 6.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 162 STPQPSRNWRLVSASSRDPTLSRC*RSTL 248
S PS NWRL+ + LS RSTL
Sbjct: 932 SLENPSVNWRLLWRNIHRSCLSSLQRSTL 960
>AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein.
Length = 506
Score = 23.0 bits (47), Expect = 8.2
Identities = 8/35 (22%), Positives = 21/35 (60%)
Frame = -3
Query: 387 NTEYDSASGA*IPTPESKFSTPDWMQSRRVDPNEV 283
NT+Y++ + + +P+ T +Q +++ PN++
Sbjct: 187 NTQYNALNDNYVTSPQPSQVTSRQLQQQQLQPNQL 221
>AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 23.0 bits (47), Expect = 8.2
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 131 YIMRRKAATMVDAATLEKL-EAGFSKLQGSDSKSLLKK 241
+++ R V A E L E+GF + QGS +KS + K
Sbjct: 10 HLLHRMDVLPVPAEHREHLHESGFVRRQGSHAKSSVHK 47
>AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 23.0 bits (47), Expect = 8.2
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 131 YIMRRKAATMVDAATLEKL-EAGFSKLQGSDSKSLLKK 241
+++ R V A E L E+GF + QGS +KS + K
Sbjct: 10 HLLHRMDVLPVPAEHREHLHESGFVRRQGSHAKSSVHK 47
>AJ439061-1|CAD27770.1| 89|Anopheles gambiae hypothetical protein
protein.
Length = 89
Score = 23.0 bits (47), Expect = 8.2
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 131 YIMRRKAATMVDAATLEKL-EAGFSKLQGSDSKSLLKK 241
+++ R V A E L E+GF + QGS +KS + K
Sbjct: 10 HLLHRMDVLPVPAEHREHLHESGFVRRQGSHAKSSVHK 47
>AF042732-3|AAC18058.1| 496|Anopheles gambiae diphenol oxidase-A2
protein.
Length = 496
Score = 23.0 bits (47), Expect = 8.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 416 DYHNGFKKTDKHPPKNWG 469
D HN K ++PPK++G
Sbjct: 448 DLHNQSVKAMRYPPKSYG 465
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,946
Number of Sequences: 2352
Number of extensions: 12722
Number of successful extensions: 38
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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