Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c13f
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 198 3e-51
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 197 6e-51
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 196 1e-50
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 195 2e-50
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 195 2e-50
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 170 8e-43
AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical ... 73 2e-13
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 31 0.93
U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical... 30 1.2
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 30 1.2
U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead transc... 29 3.7
U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead transc... 29 3.7
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 29 3.7
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 27 8.6
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical p... 27 8.6
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 198 bits (483), Expect = 3e-51
Identities = 93/154 (60%), Positives = 121/154 (78%), Gaps = 3/154 (1%)
Frame = +2
Query: 179 EKLEAGFSKLQG-SDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGI 355
+ +E ++KLQG SD SLLKK+LT++V K+KKT G+TLLD IQSG ENLDSGVGI
Sbjct: 9 KSIEEVYTKLQGASDCSSLLKKHLTKDVVAKNKSKKTRLGATLLDVIQSGGENLDSGVGI 68
Query: 356 YAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGD--VDTLGNLDPAGEFVVSTRV 529
YAPDAESY++FA+LF+P+IE+YHNGFK TD P + G+ V L +LDP G+F+VSTR+
Sbjct: 69 YAPDAESYTLFADLFNPVIEEYHNGFKATDTQPAMDLGEKNVGELADLDPEGKFIVSTRI 128
Query: 530 RCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL 631
RCGRSL+GYPFNPCL+E+ YK ME ++ +S+
Sbjct: 129 RCGRSLQGYPFNPCLSETNYKMMETRMKEIFNSI 162
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 197 bits (480), Expect = 6e-51
Identities = 102/199 (51%), Positives = 133/199 (66%), Gaps = 5/199 (2%)
Frame = +2
Query: 44 SWY*RSFKMNYKLKVTIPVVVCGGAVLAYYIMRRKAATMVDAATLEKLEAGFSKLQGSDS 223
S + RS Y V + + G AV + +A + VDAAT++K+E ++KL G +
Sbjct: 31 SQFLRSTNSRYVAGV-LAALGAGSAVYTLTPQQLQAKSEVDAATIKKIEEAYAKLNGPEG 89
Query: 224 ---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAE 394
KSLLKK+LT+EV + LK K+T G+TL DCI+SGV NLD+GVG+YAPDAE+Y++FA
Sbjct: 90 AKCKSLLKKHLTKEVVEKLKTKRTKVGATLYDCIRSGVYNLDAGVGVYAPDAEAYTLFAP 149
Query: 395 LFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNP 568
LFD IIEDYH GF K PP + G+ T LDP G+++ STR+RCGRSL+GYPFNP
Sbjct: 150 LFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKGYPFNP 208
Query: 569 CLTESQYKEMEDKVSGTLS 625
CLT+ Y EME KV S
Sbjct: 209 CLTQDNYLEMEGKVKKAFS 227
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 196 bits (478), Expect = 1e-50
Identities = 101/199 (50%), Positives = 133/199 (66%), Gaps = 5/199 (2%)
Frame = +2
Query: 44 SWY*RSFKMNYKLKVTIPVVVCGGAVLAYYIMRRKAATMVDAATLEKLEAGFSKLQGSDS 223
S + RS Y V + + G AV + +A + VDAAT++K+E ++KL G +
Sbjct: 3 SQFLRSTNSRYVAGV-LAALGAGSAVYTLTPQQLQAKSEVDAATIKKIEEAYAKLNGPEG 61
Query: 224 ---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAE 394
KSLLKK+LT++V + LK K+T G+TL DCI+SGV NLD+GVG+YAPDAE+Y++FA
Sbjct: 62 AKCKSLLKKHLTKDVVEKLKTKRTKLGATLYDCIRSGVYNLDAGVGVYAPDAEAYTLFAP 121
Query: 395 LFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNP 568
LFD IIEDYH GF K PP + G+ T LDP G+++ STR+RCGRSL+GYPFNP
Sbjct: 122 LFDKIIEDYH-GFSPKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKGYPFNP 180
Query: 569 CLTESQYKEMEDKVSGTLS 625
CLT+ Y EME KV S
Sbjct: 181 CLTQDNYLEMEGKVKKAFS 199
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 195 bits (476), Expect = 2e-50
Identities = 92/160 (57%), Positives = 118/160 (73%), Gaps = 3/160 (1%)
Frame = +2
Query: 161 VDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 337
V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LLD IQSGV NL
Sbjct: 3 VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANL 62
Query: 338 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEF 511
DSGVG+YAPDAE+Y++F LFDP+I+DYHNGF K P + G+ T L +LDP G+F
Sbjct: 63 DSGVGVYAPDAEAYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKF 122
Query: 512 VVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL 631
+ STR+RCGRSL+GYPFNPCL+E+ Y EME KV ++
Sbjct: 123 INSTRIRCGRSLQGYPFNPCLSEANYLEMESKVKAIFDNI 162
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 195 bits (476), Expect = 2e-50
Identities = 92/160 (57%), Positives = 118/160 (73%), Gaps = 3/160 (1%)
Frame = +2
Query: 161 VDAATLEKLEAGFSKLQGS-DSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 337
V + K+E G++KLQ + + SLLKKYLT+EV D LK+KKT G+ LLD IQSGV NL
Sbjct: 40 VSPDVIAKIEEGYAKLQAAPECHSLLKKYLTKEVVDQLKDKKTKLGANLLDVIQSGVANL 99
Query: 338 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEF 511
DSGVG+YAPDAE+Y++F LFDP+I+DYHNGF K P + G+ T L +LDP G+F
Sbjct: 100 DSGVGVYAPDAEAYTLFKPLFDPLIQDYHNGFAPDAKQPNTDLGEGKTSALVDLDPEGKF 159
Query: 512 VVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSL 631
+ STR+RCGRSL+GYPFNPCL+E+ Y EME KV ++
Sbjct: 160 INSTRIRCGRSLQGYPFNPCLSEANYLEMESKVKAIFDNI 199
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 170 bits (413), Expect = 8e-43
Identities = 86/165 (52%), Positives = 107/165 (64%), Gaps = 5/165 (3%)
Frame = +2
Query: 161 VDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVE 331
VD T++K+E + L G D SLLKK LT++V + LK K T G+ L DCI+SGV
Sbjct: 14 VDPVTIKKIEEAYVMLNGPDGAKCSSLLKKNLTKDVIEKLKTKSTKLGANLYDCIRSGVY 73
Query: 332 NLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGNLDPAG 505
LD+ VG+YAPDAE+Y++FA LFD IIEDYH G K PP + G+ T LDP G
Sbjct: 74 CLDALVGVYAPDAEAYTLFAPLFDKIIEDYH-GLGPDQKQPPVDLGEGKTKEFPPLDPKG 132
Query: 506 EFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGE 640
+++ STR+RCGRSL GY FNPCLTE Y EME+KV S E
Sbjct: 133 KYIKSTRIRCGRSLNGYQFNPCLTEDNYLEMEEKVKKAFSEFSDE 177
>AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical
protein K04F1.1 protein.
Length = 244
Score = 72.9 bits (171), Expect = 2e-13
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Frame = +2
Query: 146 KAATMVDAATLEKLEAGFSKLQGSDS---KSLLKKYLTREVFDSLKNKKTSFGSTLLDCI 316
+A + VDAAT++K+E + KL G + KSLL+KYLT+++ + LK K T G+++ DCI
Sbjct: 86 QAKSEVDAATIKKIEEAYVKLNGPEGAKCKSLLRKYLTKDIVEKLKTKCTKLGASVYDCI 145
Query: 317 QSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDT--LGN 490
+G+ + G+ F LF+ IED++ GF +K PP + G+ T
Sbjct: 146 LTGLRFVRQGLR-----------FVALFNKNIEDFY-GFSPKEKQPPVDLGEGKTKEFPP 193
Query: 491 LDPAG 505
LDP G
Sbjct: 194 LDPNG 198
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 30.7 bits (66), Expect = 0.93
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 201 ASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVST--RRTPS 374
AS+R +LS R TLP ++ R+ D P +S R TPAS +T R+ S
Sbjct: 257 ASNRHTSLSAGMRPTLPPMTPSSKRSSSAKRDAPLQQSSTPQQRLKTPASTTTTASRSGS 316
Query: 375 RT 380
RT
Sbjct: 317 RT 318
>U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical
protein C18F3.4 protein.
Length = 306
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 255 KYSTA*RTKRPHSDPPSLTAS---NRVSRTWTPASVSTRRTP 371
K S R PHS P++++S N + +WTP+++S TP
Sbjct: 88 KLSPPRRQSNPHSSLPAISSSTVKNEPTDSWTPSALSNDPTP 129
>AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical
protein Y73B3A.7 protein.
Length = 205
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 576 VRQGLKGYPSSERPQRTRVETTNSPAGSRLP-SVSTSPQFLGGCLSV 439
VR+ + GY + + ++++TN+P SRLP + Q LGG L +
Sbjct: 47 VRKSIMGYRGKRKTDQ-QLKSTNNPTSSRLPLNTKNVAQALGGRLHI 92
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 88 NDSGCSLRRCGPSLLHHEAKSRNNGRRRNPREIGG 192
N+ GC+ CGP + + + NNG NP GG
Sbjct: 40 NNCGCNGNNCGPQVTVVQVPNNNNGCSCNPCNGGG 74
>U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform b protein.
Length = 592
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -3
Query: 495 SRLPSVSTSPQFLGGCLSVFLKPLW*SSMIGSNSSANTEYDSASGA*IPTPESKFSTP 322
S +PSVS+ P FL LS +P + S SAS P P+SK P
Sbjct: 290 STVPSVSSMPSFLNHQLSTSSQPSSQQASGSSGPLLQRAASSASTETSPNPDSKSFVP 347
>U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform a protein.
Length = 778
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -3
Query: 495 SRLPSVSTSPQFLGGCLSVFLKPLW*SSMIGSNSSANTEYDSASGA*IPTPESKFSTP 322
S +PSVS+ P FL LS +P + S SAS P P+SK P
Sbjct: 476 STVPSVSSMPSFLNHQLSTSSQPSSQQASGSSGPLLQRAASSASTETSPNPDSKSFVP 533
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 285 PHSDPPSLTASNRVSRTW---TPASVSTRRTPSRTPCSP 392
P + S T + R +TW TP + +TR+TP T P
Sbjct: 382 PTTQTSSTTQTPRTKQTWAPWTPPTTTTRQTPPTTQAPP 420
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 169 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 279
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 391 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 428
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 169 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 279
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 454 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 491
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 169 RNPREIGGWFQQAPGIRL*VAAEEVPYQGS-IRQPEEQ 279
+NP ++GGW Q + + A PY + I QP++Q
Sbjct: 432 QNPYQVGGWQQNSVYAQQTAAPAAAPYAAAGIVQPQQQ 469
>Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 636 PSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPA 499
P R ++ E S+S +S +G+K + RP RTR+ NSP+
Sbjct: 428 PERQEKTQEMRKSMS---NSAEEGVK---KNRRPVRTRIRNGNSPS 467
>Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 636 PSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPA 499
P R ++ E S+S +S +G+K + RP RTR+ NSP+
Sbjct: 428 PERQEKTQEMRKSMS---NSAEEGVK---KNRRPVRTRIRNGNSPS 467
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,993,766
Number of Sequences: 27780
Number of extensions: 271820
Number of successful extensions: 1170
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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