Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c11r
         (769 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB076364-1|BAD01551.1|  245|Homo sapiens keratin associated prot...    31   3.4  

>AB076364-1|BAD01551.1|  245|Homo sapiens keratin associated protein
           protein.
          Length = 245

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 492 READRVPISTCC-*TTSPELSC*VQLEHPRSLCRGICNRFCC 614
           R A RVP+ +CC  T+S + SC         LCR  C+R  C
Sbjct: 204 RPARRVPVPSCCVPTSSCQPSCGRLASCGSLLCRPTCSRLAC 245


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,049,173
Number of Sequences: 237096
Number of extensions: 2178536
Number of successful extensions: 5186
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5175
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)