Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c11f
         (642 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL160289-1|CAH70722.1|  398|Homo sapiens likely ortholog of mous...    31   4.6  
AL158164-1|CAI40658.1|  398|Homo sapiens likely ortholog of mous...    31   4.6  
AJ621583-1|CAF21722.1|  398|Homo sapiens alpha2,8-sialyltransfer...    31   4.6  
AB062101-1|BAE94653.1|  398|Homo sapiens alpha-2,8-sialyltransfe...    31   4.6  

>AL160289-1|CAH70722.1|  398|Homo sapiens likely ortholog of mouse
           sialyltransferase 8-VI (alpha-2, 8-sialytransferase) (
           protein.
          Length = 398

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +1

Query: 280 VLDCPILQKASSLQKFKVK---DCDKLQ-FISLSNNSPVQTPPEVTIENVKEV 426
           +  CP  ++A     F+ K    CD +Q F+   NN+PV T     +E+ KE+
Sbjct: 110 IQSCPWKRQAEEYANFRAKLASCCDAVQNFVVSQNNTPVGTNMSYEVESKKEI 162


>AL158164-1|CAI40658.1|  398|Homo sapiens likely ortholog of mouse
           sialyltransferase 8-VI (alpha-2, 8-sialytransferase) (
           protein.
          Length = 398

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +1

Query: 280 VLDCPILQKASSLQKFKVK---DCDKLQ-FISLSNNSPVQTPPEVTIENVKEV 426
           +  CP  ++A     F+ K    CD +Q F+   NN+PV T     +E+ KE+
Sbjct: 110 IQSCPWKRQAEEYANFRAKLASCCDAVQNFVVSQNNTPVGTNMSYEVESKKEI 162


>AJ621583-1|CAF21722.1|  398|Homo sapiens alpha2,8-sialyltransferase
           protein.
          Length = 398

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +1

Query: 280 VLDCPILQKASSLQKFKVK---DCDKLQ-FISLSNNSPVQTPPEVTIENVKEV 426
           +  CP  ++A     F+ K    CD +Q F+   NN+PV T     +E+ KE+
Sbjct: 110 IQSCPWKRQAEEYANFRAKLASCCDAVQNFVVSQNNTPVGTNMSYEVESKKEI 162


>AB062101-1|BAE94653.1|  398|Homo sapiens
           alpha-2,8-sialyltransferase protein.
          Length = 398

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +1

Query: 280 VLDCPILQKASSLQKFKVK---DCDKLQ-FISLSNNSPVQTPPEVTIENVKEV 426
           +  CP  ++A     F+ K    CD +Q F+   NN+PV T     +E+ KE+
Sbjct: 110 IQSCPWKRQAEEYANFRAKLASCCDAVQNFVVSQNNTPVGTNMSYEVESKKEI 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,409,001
Number of Sequences: 237096
Number of extensions: 1734219
Number of successful extensions: 3176
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3176
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)