Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c09r
(715 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB001601-1|BAA25908.1| 1041|Homo sapiens ATP-dependent RNA helic... 31 5.4
AK126503-1|BAC86570.1| 413|Homo sapiens protein ( Homo sapiens ... 30 7.2
BX119957-19|CAM25923.1| 1041|Homo sapiens DEAD/H (Asp-Glu-Ala-As... 30 9.5
BX119957-18|CAM25922.1| 560|Homo sapiens DEAD/H (Asp-Glu-Ala-As... 30 9.5
BC009392-1|AAH09392.1| 1042|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 30 9.5
BC008825-1|AAH08825.1| 1042|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 30 9.5
BA000025-72|BAB63323.1| 1041|Homo sapiens RNA helicase protein. 30 9.5
AL845353-14|CAI41883.1| 1041|Homo sapiens DEAD/H (Asp-Glu-Ala-As... 30 9.5
AL845353-13|CAI41882.1| 560|Homo sapiens DEAD/H (Asp-Glu-Ala-As... 30 9.5
AL732442-12|CAI17762.1| 1041|Homo sapiens DEAH (Asp-Glu-Ala-His)... 30 9.5
AL732442-11|CAI17761.1| 560|Homo sapiens DEAH (Asp-Glu-Ala-His)... 30 9.5
AL662798-3|CAI18248.1| 1041|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 30 9.5
AL662798-2|CAI18247.1| 560|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 30 9.5
AB202095-1|BAE78615.1| 1041|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 30 9.5
AB103604-1|BAF31265.1| 1041|Homo sapiens DBP2 protein protein. 30 9.5
AB088098-1|BAC54930.1| 1041|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 30 9.5
AB011149-1|BAA25503.2| 1043|Homo sapiens KIAA0577 protein protein. 30 9.5
>AB001601-1|BAA25908.1| 1041|Homo sapiens ATP-dependent RNA helicase
#3 protein.
Length = 1041
Score = 30.7 bits (66), Expect = 5.4
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSPTIEGIIYVLDPGFCKQKS 699
>AK126503-1|BAC86570.1| 413|Homo sapiens protein ( Homo sapiens
cDNA FLJ44539 fis, clone UTERU3005205. ).
Length = 413
Score = 30.3 bits (65), Expect = 7.2
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = -2
Query: 429 PLWENNKVYFKIVNTQRNQYLTLAVQTTPNHNHMAYGA----NSVEGFKAQWTLQPAKYD 262
P+W +N+ N+QR + Q +P H+H A G N ++ F ++ +P+ +
Sbjct: 142 PVWLHNQDLLPDANSQRVYQIFKDDQCSPRHSHQAQGTSRLINKLDCF--EYAFEPSNFS 199
Query: 261 NDV 253
N +
Sbjct: 200 NSL 202
>BX119957-19|CAM25923.1| 1041|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 16 protein.
Length = 1041
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 699
>BX119957-18|CAM25922.1| 560|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 16 protein.
Length = 560
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 160 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 218
>BC009392-1|AAH09392.1| 1042|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 16 protein.
Length = 1042
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 699
>BC008825-1|AAH08825.1| 1042|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 16 protein.
Length = 1042
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 699
>BA000025-72|BAB63323.1| 1041|Homo sapiens RNA helicase protein.
Length = 1041
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 699
>AL845353-14|CAI41883.1| 1041|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 16 protein.
Length = 1041
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 699
>AL845353-13|CAI41882.1| 560|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 16 protein.
Length = 560
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 160 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 218
>AL732442-12|CAI17762.1| 1041|Homo sapiens DEAH (Asp-Glu-Ala-His)
box polypeptide 16 protein.
Length = 1041
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 699
>AL732442-11|CAI17761.1| 560|Homo sapiens DEAH (Asp-Glu-Ala-His)
box polypeptide 16 protein.
Length = 560
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 160 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 218
>AL662798-3|CAI18248.1| 1041|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 16 protein.
Length = 1041
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 699
>AL662798-2|CAI18247.1| 560|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 16 protein.
Length = 560
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 160 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 218
>AB202095-1|BAE78615.1| 1041|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 16 protein.
Length = 1041
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 699
>AB103604-1|BAF31265.1| 1041|Homo sapiens DBP2 protein protein.
Length = 1041
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 699
>AB088098-1|BAC54930.1| 1041|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 16 protein.
Length = 1041
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 641 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 699
>AB011149-1|BAA25503.2| 1043|Homo sapiens KIAA0577 protein protein.
Length = 1043
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 406 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETV-ALVHQLNVVFCEYKS 579
+L+VLP LP+D R+ G +V + S T+ +++ L+ FC+ KS
Sbjct: 643 ELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKS 701
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,246,844
Number of Sequences: 237096
Number of extensions: 2161535
Number of successful extensions: 4904
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4904
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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