Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c09f
         (619 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    26   1.1  
AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.    26   1.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   1.5  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   6.0  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   7.9  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   7.9  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   7.9  

>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
 Frame = -3

Query: 530 LSVHNLEVDLVVLPQRNELPADF--WTRLVLAIAVGKSAI---VAVLIVQRQSETVALVH 366
           +S+  +E+   +  ++NELPADF  W         G  A+   + VL      E   LV 
Sbjct: 173 VSLEFMEIMANLRDEKNELPADFNEWLSRWALETTGVLALDTRLGVLHSTDSGEGQRLVD 232

Query: 365 QLNVVFC 345
            +N +FC
Sbjct: 233 VVNEIFC 239


>AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.
          Length = 76

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -3

Query: 524 VHNLEVDLVVLPQRNELPADF-WTRLVLAIAVGKSAIVAVLIVQRQSETVALVHQLN 357
           +  L V +V+ P+    P  F + R  L+    + A  A  +VQR + TVAL +++N
Sbjct: 8   ISTLLVVVVIAPRHQCSPFFFQYNRPYLSQPSSQLASTAANVVQRSNVTVALGNRIN 64


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 24/105 (22%), Positives = 48/105 (45%)
 Frame = +2

Query: 188 LRGQEERSHHKCRKQTHTKQQDELHGVRLPAMAPRLQRYRPGVLPC*VQTYIRRKQH*AD 367
           LR Q ++     ++Q   +QQ +  G R   + P+L++ R            +++QH   
Sbjct: 269 LRQQRQQQQRPRQQQQQQQQQQQQQGERY--VPPQLRQQR------------QQQQHQQQ 314

Query: 368 VQARRSRFDVGR*EQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQ 502
            Q ++ +    + +QQR Q   ++ Q Q + + Q + R    +QQ
Sbjct: 315 QQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQ 359


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 256 TAWSTPTSYGSK 291
           TAW   TSYGSK
Sbjct: 238 TAWPPETSYGSK 249


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +2

Query: 422 QTCLRRWQGQDESKSQLEVRSSVGEQQGLLQDCEHSA*SVFDV-GSSNNP 568
           QT LRR Q QDE ++  E    V  +     DC+ S  S+    G+S+ P
Sbjct: 83  QTALRRAQTQDEQRALNE--GEVPPEPPRSFDCDSSTGSMASAPGTSSVP 130


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +2

Query: 422 QTCLRRWQGQDESKSQLEVRSSVGEQQGLLQDCEHSA*SVFDV-GSSNNP 568
           QT LRR Q QDE ++  E    V  +     DC+ S  S+    G+S+ P
Sbjct: 83  QTALRRAQTQDEQRALNE--GEVPPEPPRSFDCDSSTGSMASAPGTSSVP 130


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 153 DYDHSVEKSKQIYE 194
           DYDH +++SK+I E
Sbjct: 388 DYDHYLQESKKIIE 401


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,227
Number of Sequences: 2352
Number of extensions: 8822
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)