Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c08f
         (541 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    27   0.40 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    26   0.70 
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           25   1.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   2.1  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    25   2.1  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    25   2.1  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   2.8  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   2.8  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   3.7  
AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative odorant-b...    24   3.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.7  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    23   6.5  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.1 bits (57), Expect = 0.40
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 5/126 (3%)
 Frame = -3

Query: 446 LDGGVHFHQSIQEFPGHPCAQ*QEPRPRDWRQQYIHELIYVFSLHRGAVCNMSGPLTSED 267
           +DGG++   S++ FPG+          + +  +   +  ++F LH   V N    L  ED
Sbjct: 167 VDGGLNIPHSVKRFPGYSAEN------KSFNAEMHRD--HIFGLH---VANYMRTLEEED 215

Query: 266 EHGCLS--GRPVSSGILACRCRQRHEVHSPSIHRLTD---QPLLRRPCAFRKRYEACARP 102
           E        + +S GI A      ++    SI ++      P  R P +   R+ +C  P
Sbjct: 216 EEAFKRQFSKYISLGIKADDIENIYKNAHASIRKIPPSRRNPRRRSPRS-GGRWPSCRSP 274

Query: 101 PLRTTS 84
           P R  S
Sbjct: 275 PARRRS 280


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = -2

Query: 429 FPSVNPGISWAPLRTITRAKTERLASTIHPR 337
           +P +  G + APLR+I   + +++A+++HPR
Sbjct: 408 WPDLGVG-NMAPLRSIGLTELDQIAASMHPR 437


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -1

Query: 181 PFIA*LISLYFGAHALFVKDTKLVLVHHFEQLLASRCRVRNV 56
           PFIA  + +  G   L      + L+H F QL+A R R RNV
Sbjct: 265 PFIADHVLVNVGTVDLLHGRAMIDLIHDFNQLVA-RFRERNV 305


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 371 RPRDWRQQYIHELIYVFSLHRGAVCNMSGPLTSEDEHGCLS 249
           +P+D+R+  +  L  VF   +GA+ ++    T ED  G  S
Sbjct: 856 KPKDFRKHSLLPLNNVFDRIKGALPHLKKSPTKEDATGGFS 896


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 161 QPLLRRPCAFRKRYEACAR 105
           Q  +RR CAF K++EA  R
Sbjct: 379 QAHIRRHCAFAKQFEALCR 397


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 161 QPLLRRPCAFRKRYEACAR 105
           Q  +RR CAF K++EA  R
Sbjct: 410 QAHIRRHCAFAKQFEALCR 428


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -3

Query: 209 RQRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIP 75
           +Q+ ++HS  +   +     RRP        + + P L TTSG P
Sbjct: 25  QQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEP 69


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -3

Query: 209 RQRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGIP 75
           +Q+ ++HS  +   +     RRP        + + P L TTSG P
Sbjct: 25  QQQQQLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEP 69


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 376 SCYCAQGCPGN 408
           +CYC   CPGN
Sbjct: 73  TCYCEGHCPGN 83


>AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative
           odorant-binding protein OBPjj2 protein.
          Length = 228

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 237 FIGNPCLSLPPATRS 193
           F GNPCL  PP  ++
Sbjct: 55  FAGNPCLKGPPVPKN 69


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 64   VPGNGMPEVVRSGGRAQA 117
            VPG+G+P    SGG   A
Sbjct: 3225 VPGSGLPAAAASGGAPSA 3242


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 386 VRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSK 493
           V  GAQ++ G   G  P  + PK    IR     SK
Sbjct: 199 VYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSK 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,690
Number of Sequences: 2352
Number of extensions: 13950
Number of successful extensions: 30
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)