Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c07r
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      27   0.16 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      27   0.16 
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    23   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   3.4  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   7.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 382 SQSGAMSGLTQVTSMADALLPGLEIVVGSP 293
           S  GA+SGL+ +TS    +LP     V SP
Sbjct: 682 SSPGALSGLSSLTSPGGMVLPSPSTSVASP 711



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +3

Query: 453 QKYTVQ-ESIHKYLYNKTNWNMYKDKSKDIFDNFSPSTVDPLVQYDEFSKLLLSLKENCI 629
           +KY  + E   K  Y+K  +N   +K  D++ +  P +V   +      KLL +   N +
Sbjct: 332 RKYLCKNEDETKNHYSKNTYNEQGNKLADLYKSLGPDSVYSFINNLTDRKLLSAWYMNTV 391


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 382 SQSGAMSGLTQVTSMADALLPGLEIVVGSP 293
           S  GA+SGL+ +TS    +LP     V SP
Sbjct: 574 SSPGALSGLSSLTSPGGMVLPSPSTSVASP 603



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +3

Query: 453 QKYTVQ-ESIHKYLYNKTNWNMYKDKSKDIFDNFSPSTVDPLVQYDEFSKLLLSLKENCI 629
           +KY  + E   K  Y+K  +N   +K  D++ +  P +V   +      KLL +   N +
Sbjct: 224 RKYLCKNEDETKNHYSKNTYNEQGNKLADLYKSLGPDSVYSFINNLTDRKLLSAWYMNTV 283


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 411 SYHLPTFVNIITSTQKYTVQESIHKY 488
           S+H     N I+    +T+  S+HKY
Sbjct: 73  SFHKLKLTNNISDKHGFTILNSMHKY 98


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 424 LLLLTSLPQLKNIQFKSLYINIYIIKQTG 510
           L  + SLP+++ +Q+  L I  Y+I + G
Sbjct: 107 LQFVVSLPEVERVQWIWLLIFAYLIPEVG 135


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 424 LLLLTSLPQLKNIQFKSLYINIYIIKQTG 510
           L  + SLP+++ +Q+  L I  Y+I + G
Sbjct: 107 LQFVVSLPEVERVQWIWLLIFAYLIPEVG 135


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 351 CVSPDIAPLCEWYVGDDSLGS 413
           C  P+  P CE Y GD  L S
Sbjct: 211 CEDPEDVPGCEDYYGDLDLKS 231


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 90  VLCVYCPPNNSSISLSTLRKIILQLPKPC 176
           VLC  C    + + +ST R  I Q  K C
Sbjct: 11  VLCPECENPETELLVSTKRSTISQGCKAC 39


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +2

Query: 41  YSIYSYFYNNSMWSCLGAMC 100
           ++IY  ++   +WSC    C
Sbjct: 246 WTIYEMYHLAILWSCTSTNC 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,046
Number of Sequences: 336
Number of extensions: 3594
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)