Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c07r
(743 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 55 2e-09
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 54 5e-09
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 52 1e-08
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 52 1e-08
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 52 2e-08
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 49 2e-07
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 48 3e-07
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 47 5e-07
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 47 5e-07
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 44 7e-06
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 42 3e-05
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 41 4e-05
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 40 6e-05
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 39 2e-04
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 37 8e-04
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 24 4.3
AJ304406-1|CAC35454.1| 131|Anopheles gambiae putative epidermal... 23 10.0
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 23 10.0
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 55.2 bits (127), Expect = 2e-09
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Frame = +3
Query: 84 VSVLCVYCPPNNSSISLSTLRKII---LQLPKPCLVSGDFNAHNIAFGCDTSNSRGRELF 254
+ + VY PP+ S L + + +++GDFNA + +G +N RG EL
Sbjct: 85 IDFISVYAPPSLSPQEYERLLEAVELEASSHSHVVIAGDFNAWHTEWGSRRNNLRGEELL 144
Query: 255 DIFDDADLCILNTGD-PTTISRPGNNASAIDVTCVSPDIAPLCEWYVGDDSLGSYHLPTF 431
+ + L ILN G PT I R S IDVT +P + W V D + + L F
Sbjct: 145 QMVEVLGLSILNNGSAPTFIGRGAARPSVIDVTFATPSLVLHDTWEVLDFARSDHQLIRF 204
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 54.0 bits (124), Expect = 5e-09
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Frame = +3
Query: 78 GPVSVLCVYCPPNNSSISLSTLRKIILQLP----KPCLVSGDFNAHNIAFGCDTSNSRGR 245
G + L Y PP + + + QL +++GDFNA ++ +G + ++ +G
Sbjct: 84 GGTTFLSCYAPPRQPTDEFERFIEAV-QLETLTHSQVVIAGDFNAWHVEWGSERNSEKGE 142
Query: 246 ELFDIFDDADLCILNTGDPTTISRPG-NNASAIDVTCVSPDIAPLCEWYV-GDDSLGSYH 419
EL DL +LN G +T G AS +DV +P IA W V GD S +
Sbjct: 143 ELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVDVAFATPTIAQPGTWNVCGDYSYSDHR 202
Query: 420 LPTF 431
T+
Sbjct: 203 YITY 206
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 52.4 bits (120), Expect = 1e-08
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = +3
Query: 63 IITVCGPVSVLCVYCPPNNSSISLSTLRKII---LQLPKPCLVSGDFNAHNIAFGCDTSN 233
+I V ++ Y PP + K I + P ++SGDFNA +G ++N
Sbjct: 75 VIAVINKITFCSCYAPPRWDLEKFEEMLKRISDEVYDVNPIIISGDFNAWATEWGSKSTN 134
Query: 234 SRGRELFDIFDDADLCILNTGDPTTISRPGNNASAIDVTCVSPDIAPLCEWYVGD 398
+RG + + F +L ++N G T R + S ID+T SP +A W V +
Sbjct: 135 ARGNAVLEHFSRLNLVLVNVGFCPTFVR-NSRTSIIDLTFCSPALASSMNWRVSN 188
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 52.4 bits (120), Expect = 1e-08
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 177 LVSGDFNAHNIAFGCDTSNSRGRELFDIFDDADLCILNTG-DPTTISRPGNNASAIDVTC 353
++ GDFNA + +G ++ RG +L + L ++N+G +PT I R +S IDV
Sbjct: 139 VIDGDFNAWHTEWGSARNSQRGEDLLQLIQSVQLQVINSGNEPTFIGRGAATSSVIDVCF 198
Query: 354 VSPDIAPLCEWYVGDDSLGSYHLPTF 431
+P IA W V + + + L T+
Sbjct: 199 ATPSIARPETWEVHEFARSDHQLITY 224
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 52.0 bits (119), Expect = 2e-08
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Frame = +3
Query: 78 GPVSVLCVYCPPNNSSISLSTLRKII---LQLPKPCLVSGDFNAHNIAFGCDTSNSRGRE 248
G ++ L Y PP+ S + + I Q +V+GDFNA + +G SN RG
Sbjct: 140 GGITFLSCYAPPSLSREGFAEFVEAIELEAQSHPQVVVAGDFNAWHEEWGSRRSNERGEV 199
Query: 249 LFDIFDDADLCILNTGDPTTISRPG-NNASAIDVTCVSPDIAPLCEWYVGDDSLGSYH 419
L + L ++N G+ T G AS +DVT S IA W V + S H
Sbjct: 200 LLEASQQLGLLLMNRGNVATFVGNGVATASVVDVTFASSSIAQPSTWLVRNTDTRSDH 257
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 48.8 bits (111), Expect = 2e-07
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 10/181 (5%)
Frame = +3
Query: 78 GPVSVLCVYCPPNNS----SISLSTLRKIILQLPKPCLVSGDFNAHNIAFGC------DT 227
G + V+ VY PP S I L + + K ++ GDFNA + ++ +T
Sbjct: 79 GDMRVVSVYAPPRFSMEEFQIMLDNTVMAVTGIHK-FVIGGDFNAWSASWNNQLGERGET 137
Query: 228 SNSRGRELFDIFDDADLCILNTGDPTTISRPGNNASAIDVTCVSPDIAPLCEWYVGDDSL 407
RG + F D +LN G T PG S +D+T S +A +W V +
Sbjct: 138 QKRRGELVLSTFAQIDAILLNDGSTPTYVGPG-RTSVVDLTFASRTVARSFKWEVLSSYM 196
Query: 408 GSYHLPTFVNIITSTQKYTVQESIHKYLYNKTNWNMYKDKSKDIFDNFSPSTVDPLVQYD 587
S H +++ T +S+ T W++ K SKDIF+ + VD V
Sbjct: 197 NSDHRAIRIDLET--------QSVRNLSRPITGWSI-KYFSKDIFEVMMQAAVDTEVTTS 247
Query: 588 E 590
E
Sbjct: 248 E 248
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 48.0 bits (109), Expect = 3e-07
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +3
Query: 84 VSVLCVYCPPNNSSISLSTLRKII-LQLPKPC--LVSGDFNAHNIAFGCDTSNSRGRELF 254
++ + VY PP+ S+ L I L+ +V+GDFNA + +G + RG EL
Sbjct: 148 ITFISVYAPPSLSAHEFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSGRNGQRGIELL 207
Query: 255 DIFDDADLCILNTG-DPTTISRPGNNASAIDVTCVSPDIAPLCEWYVGDDSLGSYHLPTF 431
+ L ILN G PT I R +S IDV+ S +I W V S + L F
Sbjct: 208 QTVETLGLSILNQGRKPTFIGRGFAASSVIDVSFASREIVRPDTWSVIPFSRSDHELIAF 267
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 47.2 bits (107), Expect = 5e-07
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 177 LVSGDFNAHNIAFGCDTSNSRGRELFDIFDDADLCILNTGDPTTISRPG-NNASAIDVTC 353
++ GDFNA + A+G + +G EL + + L +LN G+ +T + G S IDVT
Sbjct: 117 VLGGDFNAWHEAWGSARTKRKGEELLNTVEQLGLIVLNRGNTSTFTGRGIAGESVIDVTF 176
Query: 354 VSPDIAPLCEWYV 392
SP I W V
Sbjct: 177 ASPSIVRYNTWEV 189
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 47.2 bits (107), Expect = 5e-07
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = +3
Query: 168 KPCLVSGDFNAHNIAFGCDTSNSRGRELFDIFDDADLCILNTGDPTTISRPGNNASAIDV 347
+P +++GDFNA + +G +NSRG + + F + + N G T +R S +D+
Sbjct: 111 RPLVIAGDFNAWAVEWGSKRTNSRGDAVLESFARLGVTLGNAGTTPTFNR-NKRTSIVDI 169
Query: 348 TCVSPDIAPLCEWYVGD 398
T S ++ W V D
Sbjct: 170 TFCSTTLSERLNWRVSD 186
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 43.6 bits (98), Expect = 7e-06
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Frame = +3
Query: 78 GPVSVLCVYCPPNNSSISLST-LRKIILQ-LPKP-CLVSGDFNAHNIAFGCDTSNSRGRE 248
G V + C Y PP+ + L I L+ P +V+GDFNA + +G + RG E
Sbjct: 95 GVVFISC-YAPPSLNLAEFERFLEAIELEGFSHPQVVVAGDFNARHEEWGSPRTCDRGEE 153
Query: 249 LFDIFDDADLCILNTG-DPTTISRPGNNASAIDVTCVSPDIAPLCEWYVGDDSLGSYH 419
L + + L ++N G + T + S +DV SP IA W V S H
Sbjct: 154 LHGMVEQLGLIVINQGREYTFVGNGVALPSIVDVAFASPSIARPDTWVVSTSYTASDH 211
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 41.5 bits (93), Expect = 3e-05
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +3
Query: 84 VSVLCVYCPPNNSSISLS-TLRKI-ILQLPKPCLV-SGDFNAHNIAFGCDTSNSRGRELF 254
V +C Y P+ +++I +L P +V +GD NA + A+G +N++G +
Sbjct: 83 VLFICCYVSPSAGVSEFEEVMQRIDVLARGHPRVVFAGDLNAWHTAWGSCRTNAKGEAVV 142
Query: 255 DIFDDADLCILNTGD-PTTISRPGNNASAIDVTCVSPDIA 371
+ D L +LNTG PT + S +DV S IA
Sbjct: 143 QLVDSLGLEVLNTGTAPTFLGNGVARPSVVDVAFASSSIA 182
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 41.1 bits (92), Expect = 4e-05
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +3
Query: 36 QNIQFIAISIITVCGPVSVLCVYCPPNNSSISLSTLRK---IILQLPKPCLVSGDFNAHN 206
+++ + I + V G ++++ Y PN + + I+++ L++GDFNA +
Sbjct: 68 RSVTVLGIVVADVNG-ITIVYYYVKPNVGVRQFEEIMERIDILIRGHPRVLLAGDFNAWH 126
Query: 207 IAFGCDTSNSRGRELFDIFDDADLCILNTGDPTTISRPGN-NASAIDVTCVSPDI 368
A+G + + +G L + + L +LN G T G+ S IDV SP I
Sbjct: 127 TAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSI 181
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 40.3 bits (90), Expect = 6e-05
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Frame = +3
Query: 78 GPVSVLCVYCPPNNSSISLSTLR-KIILQLP--KPCLVSGDFNAHNIAFGC------DTS 230
G + ++ Y PP+ + L I+L + +V+GDFNA + ++ ++
Sbjct: 81 GGILIVSAYAPPSWTVQEFEELLDNIVLTVSGSSKFVVAGDFNAWSSSWANTLGARGESQ 140
Query: 231 NSRGRELFDIFDDADLCILNTGDPTTISRPGNNASAIDVTCVSPDIAPLCEWYVGDDSLG 410
RG L F ++ ++N G T ++ SAID+T VS + W V D +
Sbjct: 141 RLRGDTLLAAFAGLEMVLMNNGQDTFVTP--ERKSAIDLTFVSQSLMETTGWEVLPDYMN 198
Query: 411 SYHLPTFVNI 440
S H+ + I
Sbjct: 199 SDHIGILITI 208
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 38.7 bits (86), Expect = 2e-04
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Frame = +3
Query: 45 QFIAISIITVCGPVSVLCVYCPPNNSSISLSTLRKIILQLPKPC---LVSGDFNAHNIAF 215
Q + + V G V C P S + KI L + + C L++GDFNA ++ +
Sbjct: 72 QTLGVVAADVGGTTIVSCYVSPQTGVPEFRSIMEKIDL-IVRGCSRVLLAGDFNAMHLDW 130
Query: 216 GCDTSNSRGRELFDIFDDADLCILNTGDPTTISRPGNNASAIDVTCVSPDI 368
G + +G EL + D+ L +LN D + GN A PD+
Sbjct: 131 GSSRTCPKGLELLQLADNLGLVLLNKADCLPTFK-GNRADTNRFPPSRPDV 180
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 36.7 bits (81), Expect = 8e-04
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Frame = +3
Query: 90 VLC-VYCPPNNSSISLSTLRK----IILQLPK--PCLVSGDFNAHNIAFGCDTSN----- 233
V C VY PP S +++ ++ I+ LP+ ++ G N + A+G +
Sbjct: 84 VFCSVYLPPVGSDLTVEEYKRKWTEIVSMLPRNRDTVIGGYVNVWSGAWGMERRPNDGER 143
Query: 234 -SRGRELFDIFDDADLCILNTGDPTT-ISRPGNNASAIDVTCVSPDIAPLCEWYVGDDSL 407
SRG + D L +LN G+ +T I G N S +DV+ SP + W V D++
Sbjct: 144 VSRGGVVMDAAAALGLVLLNQGNQSTWIGANGRN-SIVDVSFCSPSLVGDNNWRVCDETP 202
Query: 408 GSYHLPTFV 434
++ FV
Sbjct: 203 SDHNTIKFV 211
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 24.2 bits (50), Expect = 4.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 159 QLPKPCLVSGDFNAHNIAFGCDTS 230
+L KPC+ D N+ NI D S
Sbjct: 363 ELVKPCICHRDLNSRNILVKSDLS 386
>AJ304406-1|CAC35454.1| 131|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 131
Score = 23.0 bits (47), Expect = 10.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 358 LTQVTSMADALLPGLEIVVGSPVFKIHK 275
L + + +LP L+I+ G FK++K
Sbjct: 100 LISLYDLPQVILPRLQIIRGRTTFKLNK 127
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.0 bits (47), Expect = 10.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 358 LTQVTSMADALLPGLEIVVGSPVFKIHK 275
L + + +LP L+I+ G FK++K
Sbjct: 60 LISLYDLPQVILPRLQIIRGRTTFKLNK 87
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,739
Number of Sequences: 2352
Number of extensions: 14077
Number of successful extensions: 49
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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