Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c07f
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.35 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.81 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.81 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   1.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   3.3  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   4.3  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   4.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   7.5  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   7.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   7.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.9  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -1

Query: 551 SRKNTTPGLDDIPYIMLQNLHVSD*YEKVFVIRFYCNL 438
           SRK     ++    I+     VSD Y+ + V++F+C+L
Sbjct: 224 SRKIFIECIEQYNVILRYTKIVSDTYQGILVVQFFCSL 261


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 547 ERIQPLVLTIFLILCFKICTFLTDMKKCL 461
           ER+Q + L IF  L  ++ T++  ++KCL
Sbjct: 117 ERVQWIWLLIFAYLIPEVGTWIRAVRKCL 145


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 547 ERIQPLVLTIFLILCFKICTFLTDMKKCL 461
           ER+Q + L IF  L  ++ T++  ++KCL
Sbjct: 117 ERVQWIWLLIFAYLIPEVGTWIRAVRKCL 145


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -2

Query: 340 WIFNMYFGRSLYIKYNNVFHGPKLAFKGLMQ--GSSLSPILYNLYTSQ 203
           WI     G +  I + N ++   L F  +M    S+++PILYN+ +S+
Sbjct: 314 WIIVAPAGSNFEIGFENYYN--ILYFSRIMFHINSAVNPILYNIISSK 359


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 177 GGNEADLSHLFLSCPTFKFQRLILVTDIMKLMDFDENNQTKHGNSLAN 34
           GG+EA    L  + P  ++ RL    D   ++  D+N+       LA+
Sbjct: 24  GGDEATADELCENRPADEYFRLTTEGDCRDVVRCDKNSDNNGATRLAS 71


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 301 KYNNVFHGPKLAFKGLMQGSSLSPILYNLYTSQ 203
           KY N+ +  ++    +   S+++PILYNL +S+
Sbjct: 328 KYYNILYFCRIM---VYLNSAINPILYNLMSSK 357


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 2   SNESKADLVGLFAKEFPCLV*LFSSKSINFIISVTSIK 115
           S  SK    G F  +F  L  +F S +   IIS+  I+
Sbjct: 350 SRTSKFSAAGFFPVDFTLLGFIFGSVTSYIIISIQFIE 387


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -2

Query: 412 YDNVDLHQLIR 380
           YDN+DL+Q+++
Sbjct: 26  YDNIDLNQILK 36


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -2

Query: 412 YDNVDLHQLIR 380
           YDN+DL+Q+++
Sbjct: 26  YDNIDLNQILK 36


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 557 LSSRKNTTPGLDDIPYI 507
           + SRKNTT  +D  P +
Sbjct: 168 VDSRKNTTVSIDVFPAV 184


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 412 YDNVDLHQLIR 380
           YDNVDL ++I+
Sbjct: 28  YDNVDLDEIIK 38


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 211 TSQIYRHVTELWRK 170
           T   YRH+TEL R+
Sbjct: 77  TRDNYRHITELKRR 90


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 475 MKKCLLSGSTAICVFLDVQGA 413
           +KKCL  G    CV  +VQ A
Sbjct: 245 LKKCLSVGMRPECVVPEVQCA 265


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 165 ADLSHLFLSCPTFKFQRLI 109
           ADL+  FL C   KF+  +
Sbjct: 336 ADLNENFLQCQDEKFESFV 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,140
Number of Sequences: 336
Number of extensions: 3541
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)