Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c07f
(575 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 49 1e-07
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 47 5e-07
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 38 2e-04
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 36 0.001
AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse t... 35 0.002
AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse t... 34 0.003
AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse t... 33 0.005
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 33 0.007
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 33 0.007
AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse t... 32 0.012
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 32 0.012
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 31 0.020
AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse t... 31 0.027
AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse t... 30 0.047
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 30 0.062
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 29 0.11
AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsiv... 27 0.33
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 27 0.33
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 27 0.33
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 27 0.44
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 27 0.58
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 26 0.76
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 1.8
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 25 2.3
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 23 7.1
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 48.8 bits (111), Expect = 1e-07
Identities = 23/99 (23%), Positives = 50/99 (50%)
Frame = -2
Query: 496 ICTFLTDMKKCLLSGSTAICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFG 317
+ +F+T++ + +G+ ++ D A+D++ L+ L LGF ++ W+ +
Sbjct: 592 LMSFVTNIFRSFEAGTQLDAIYTDFHAAFDSLPHSLLLAKLSKLGFGDGIISWLSSYLSN 651
Query: 316 RSLYIKYNNVFHGPKLAFKGLMQGSSLSPILYNLYTSQI 200
RS +K + G+ QG LSP+L++L+ + +
Sbjct: 652 RSCRVKTGSYLSEEFFCTSGVPQGCVLSPLLFSLFINDV 690
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 46.8 bits (106), Expect = 5e-07
Identities = 22/96 (22%), Positives = 51/96 (53%)
Frame = -2
Query: 487 FLTDMKKCLLSGSTAICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSL 308
F+T + +G+ ++ D++ A+D++ L+ L LG P L++W+ + R+
Sbjct: 666 FVTYCTSQIDAGAQVDAIYTDLKAAFDSLPHAILLAKLDKLGIPSPLVQWLKSYLIHRTY 725
Query: 307 YIKYNNVFHGPKLAFKGLMQGSSLSPILYNLYTSQI 200
+K + ++ G+ QGS++ P+L+ L+ + +
Sbjct: 726 IVKIDKHMSKEIVSSSGVPQGSNIGPLLFILFINDV 761
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 38.3 bits (85), Expect = 2e-04
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = -2
Query: 454 GSTAIC--VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFH 281
G+ C V LDV+ A+++ + R L + P K L I YF + + N +
Sbjct: 543 GANRFCAVVTLDVKNAFNSASWTAIARSLQRINIP-KYLYDIIGNYFRNRVLLYETNEGN 601
Query: 280 GPKLAFKGLMQGSSLSPILYNLYTSQI 200
++ G+ QGS L P L+NL +++
Sbjct: 602 RERVVTAGVPQGSVLGPTLWNLMYNEV 628
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 35.5 bits (78), Expect = 0.001
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGP--KLAF 263
V LDV+ A++ + L G P LL+ + + + R L N GP +
Sbjct: 586 VALDVRNAFNTASWQSIANALREKGVPSGLLRILQSYFTDRELIF---NTSEGPVVRCVS 642
Query: 262 KGLMQGSSLSPILYNLYTSQIYR 194
G+ QGS L P L+N+ + R
Sbjct: 643 AGVPQGSILGPTLWNVMYDGVLR 665
>AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 34.7 bits (76), Expect = 0.002
Identities = 18/82 (21%), Positives = 41/82 (50%)
Frame = -2
Query: 487 FLTDMKKCLLSGSTAICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSL 308
F+T + +G+ ++ D++ A+D++ L+ L + FP L++W+ + R+
Sbjct: 51 FVTYYTSQIDAGAQVDAIYTDLKSAFDSLPHAILLAKLNKVRFPCSLVQWLKSYLINRTY 110
Query: 307 YIKYNNVFHGPKLAFKGLMQGS 242
+K + ++ G+ QGS
Sbjct: 111 IVKIDKHMSKKIVSSSGVPQGS 132
>AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse
transcriptase protein.
Length = 131
Score = 34.3 bits (75), Expect = 0.003
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -2
Query: 487 FLTDMKKCLLSGSTAICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSL 308
F++ SG+ ++ D++ A+D V+ L+ L LGF L++W+ + R
Sbjct: 51 FVSHCHAAFASGAQMDVIYTDLKAAFDRVNHRLLLAKLARLGFSASLVEWLESYLTNRRY 110
Query: 307 YIK 299
+K
Sbjct: 111 RVK 113
>AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 33.5 bits (73), Expect = 0.005
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLAFKG 257
++ D++ A+D + L+ L LG P L+ W+ + GR+ ++ A G
Sbjct: 68 IYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRSYLMGRTYSVRMGPHLSRSLRASSG 127
Query: 256 LMQGS 242
+ QGS
Sbjct: 128 VPQGS 132
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 33.1 bits (72), Expect = 0.007
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = -2
Query: 457 SGSTAICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHG 278
SG V LDV A+++ + L + P K L I YF R+ + Y+
Sbjct: 539 SGRYCAVVTLDVTNAFNSASWLAIANALQRINTP-KYLYDIIGDYF-RNRVLMYDTTDGP 596
Query: 277 PKLAF-KGLMQGSSLSPILYNLYTSQIYR 194
++A G+ QGS L P L+NL + R
Sbjct: 597 AEIAVTSGVPQGSVLGPTLWNLMYDGVLR 625
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 33.1 bits (72), Expect = 0.007
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGP--KLAF 263
V LD++ A++ + + L S P L+K I + GR L + GP +
Sbjct: 642 VALDIRNAFNTANWQAIADALQSKNVPSYLMKIIGAYFEGRKLLF---DTSEGPVERHIS 698
Query: 262 KGLMQGSSLSPILYNLYTSQIY 197
G+ QGS L P L+N+ ++
Sbjct: 699 AGVPQGSILGPTLWNMMYDGVF 720
>AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 32.3 bits (70), Expect = 0.012
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLAFKG 257
++ D++ A+D + L+ L LG P L+ W+ + GR+ ++ A G
Sbjct: 68 IYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRSYLMGRTYSVRMGPHLSRFLRASSG 127
Query: 256 LMQGS 242
+ QGS
Sbjct: 128 VPQGS 132
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 32.3 bits (70), Expect = 0.012
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGP--KLAF 263
V LDV+ A++ + L + G P +L + + + + R L +Y+ GP +
Sbjct: 576 VALDVRNAFNTASWQSIAEALQAKGVPVQLCRILQDYFADREL--EYDTA-DGPVTRRVS 632
Query: 262 KGLMQGSSLSPILYNL 215
G+ QGS L P L+N+
Sbjct: 633 AGVTQGSILGPTLWNI 648
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 31.5 bits (68), Expect = 0.020
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = -2
Query: 442 ICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGP--KL 269
+ V LDV+ A++ + + L + G P L + + + + R LY + GP +
Sbjct: 625 LVVALDVKNAFNTANWQSIASRLQAKGVPVGLQRMLRSYFEDRVLYF---DTSEGPVVRH 681
Query: 268 AFKGLMQGSSLSPILYNL 215
G+ QGS L P L+N+
Sbjct: 682 VTAGVPQGSILGPTLWNI 699
>AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse
transcriptase protein.
Length = 129
Score = 31.1 bits (67), Expect = 0.027
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = -2
Query: 487 FLTDMKKCLLSGSTAICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSL 308
F+++ SG+ V+L + A+D V+ L+ L +G L+KW + RS
Sbjct: 51 FVSNCHAAFTSGAQMDAVYL--KAAFDRVNHRLLLAKLARIGLSTPLVKWFRSYISERSY 108
Query: 307 YIKYNNV 287
Y++ + V
Sbjct: 109 YVQIDGV 115
>AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 30.3 bits (65), Expect = 0.047
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK 299
++ D++ A+D + L+ L LG P L+ W+ + GR+ ++
Sbjct: 68 IYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRSYLMGRTYSVR 113
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 29.9 bits (64), Expect = 0.062
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = -2
Query: 472 KKCLLSGSTAICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYN 293
K+CLL V LDV+ A++ + L G P +L + + + R L Y+
Sbjct: 567 KRCLL------VVALDVRNAFNTASWQCIATALEDKGVPRQLRNILRDYFANRELV--YD 618
Query: 292 NVFHGP--KLAFKGLMQGSSLSPILYNLYTSQIYR 194
GP + G+ QGS L P L+N+ + R
Sbjct: 619 TA-DGPVTRRVTAGVPQGSILGPTLWNIMYDGVLR 652
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 29.1 bits (62), Expect = 0.11
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -2
Query: 442 ICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGP--KL 269
+ V +DV+ A++ + L G P L + + + + R L + ++ GP +
Sbjct: 632 LVVSMDVKNAFNTASWQAIATALQMKGVPAGLQRIVRSYFENRELVFETSD---GPVTRS 688
Query: 268 AFKGLMQGSSLSPILYN 218
G+ QGS L P L+N
Sbjct: 689 ITAGVPQGSILGPTLWN 705
>AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsive
protein 2 protein.
Length = 439
Score = 27.5 bits (58), Expect = 0.33
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 397 LHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLAFKG 257
++ + +L + GF G L+W F M + + V+HG K F G
Sbjct: 135 INSVYSLLKTYGFDGVDLEWQFPMNKPKKVRSTLGGVWHGFKKVFSG 181
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 27.5 bits (58), Expect = 0.33
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLAFKG 257
V D+ A+D VD L + S+GF L+ + S I N P +
Sbjct: 587 VSFDLSQAFDRVDRGFLFNNMVSMGFNPGLVGLLRRFGDQSSSRILVNGSLSPPISIRRS 646
Query: 256 LMQGSSLSPILYNLY 212
+ QG LS L+ LY
Sbjct: 647 VRQGDPLSMHLFILY 661
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.5 bits (58), Expect = 0.33
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGP--KLAF 263
V LDV+ A++ + L S P L K + + R L ++ GP +
Sbjct: 587 VSLDVRNAFNTASWKSIAMALRSKEVPASLQKLLQHWMTDRQLVFDTDD---GPVTRNLS 643
Query: 262 KGLMQGSSLSPILYNL 215
G+ QGS L P L+N+
Sbjct: 644 TGVPQGSILGPTLWNV 659
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 27.1 bits (57), Expect = 0.44
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLAFK- 260
V +DV+ A+++ + + L + P L + + Y +++ Y+ K++
Sbjct: 542 VTIDVKNAFNSANWEAIHAALSKMMIPPYLCR-LLRSYLDHRVFL-YDTALGIKKMSLTA 599
Query: 259 GLMQGSSLSPILYNL 215
G+ QGS L P L+N+
Sbjct: 600 GVPQGSILGPTLWNV 614
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 26.6 bits (56), Expect = 0.58
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLAFKG 257
V LD+ A++ + L + G P LL I YF I + + G
Sbjct: 581 VALDICNAFNTASWQSIADALRNKGVPSALLN-IIGSYFEERKLIYNTSAGPVERHISAG 639
Query: 256 LMQGSSLSPILYNL 215
+ Q S L P L+N+
Sbjct: 640 VPQESILGPTLWNV 653
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 26.2 bits (55), Expect = 0.76
Identities = 19/81 (23%), Positives = 37/81 (45%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLAFKG 257
V +DV+ A ++ + + + L P + N + GR+L+ + ++ G
Sbjct: 562 VTVDVRNALNSANWTAIGQALQRENTPPYFQALLRNYFVGRTLHYDTDEKVVSRTVS-AG 620
Query: 256 LMQGSSLSPILYNLYTSQIYR 194
+ QGS L P L+N+ + R
Sbjct: 621 VPQGSVLGPTLWNVMYDDLLR 641
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 25.0 bits (52), Expect = 1.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 81 DFDENNQTKHGNSLANNPTRSALDSL 4
D DE +HG A+ P+ S LDS+
Sbjct: 980 DEDEEGGEEHGQREASAPSSSVLDSM 1005
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 24.6 bits (51), Expect = 2.3
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = -2
Query: 451 STAICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPK 272
ST + + LD + A+D++ L+ L L FP L+ + + R + N
Sbjct: 66 STGLAL-LDTEKAFDSIWHQGLLSKLIKLNFPSYLINIVNSFISNRQNKVHILNSTSSTY 124
Query: 271 LAFKGLMQGS 242
G+ QGS
Sbjct: 125 TPKAGVPQGS 134
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 23.0 bits (47), Expect = 7.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 571 NLTWLCLQERIQPLVLTIF 515
NLTWL +++ I L TIF
Sbjct: 184 NLTWLDMRDNIFRLPATIF 202
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,349
Number of Sequences: 2352
Number of extensions: 13132
Number of successful extensions: 43
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -