Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c07f
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein. 38 0.025
X52235-2|CAA36480.1| 712|Homo sapiens protein ( Human DNA for L... 36 0.10
X03145-4|CAA26918.1| 140|Homo sapiens protein ( Human KpnI repe... 36 0.10
AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein. 36 0.10
U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein. 36 0.14
U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein. 36 0.14
U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein. 36 0.14
U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein. 36 0.14
U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein. 36 0.14
U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein. 36 0.14
U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein. 36 0.14
U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein. 36 0.14
M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposo... 36 0.14
M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein. 36 0.14
M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein. 36 0.14
AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens ... 36 0.14
AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein. 36 0.14
AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein. 36 0.14
AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein. 36 0.14
AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein. 36 0.14
AK127459-1|BAC86988.1| 238|Homo sapiens protein ( Homo sapiens ... 33 0.95
U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein. 32 1.3
AK096400-1|BAC04777.1| 644|Homo sapiens protein ( Homo sapiens ... 31 3.8
AK091740-1|BAC03736.1| 473|Homo sapiens protein ( Homo sapiens ... 31 3.8
AK094887-1|BAC04450.1| 272|Homo sapiens protein ( Homo sapiens ... 30 5.1
U80164-1|AAC51079.1| 102|Homo sapiens immunoglobulin heavy chai... 29 8.9
AK127765-1|BAC87120.1| 184|Homo sapiens protein ( Homo sapiens ... 29 8.9
AF103294-1|AAD30854.1| 121|Homo sapiens immunoglobulin heavy ch... 29 8.9
>U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 37.9 bits (84), Expect = 0.025
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = -2
Query: 442 ICVFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL 269
+ + +D + A+D + +++ L LG G LK I R++Y K N + +G KL
Sbjct: 595 VIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKII------RAIYDKPTANIILNGQKL 648
Query: 268 -AFK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
AF G QG LSP+L+N+ + R + +
Sbjct: 649 EAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>X52235-2|CAA36480.1| 712|Homo sapiens protein ( Human DNA for
LINE-1 transposable element ORFI and II. ).
Length = 712
Score = 35.9 bits (79), Expect = 0.10
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
V +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 34 VSIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 87
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 88 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 118
>X03145-4|CAA26918.1| 140|Homo sapiens protein ( Human KpnI
repetitive sequence (T-betaG41) 3kb downstream of
beta-globin gene. ).
Length = 140
Score = 35.9 bits (79), Expect = 0.10
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G LK I R++Y K N + G KL A
Sbjct: 35 ISIDAEKAFDKIQQCFMLKTLNKLGIDGTYLKII------RAIYDKPTANIILSGQKLEA 88
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 89 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 119
>AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein.
Length = 420
Score = 35.9 bits (79), Expect = 0.10
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKL-AFK 260
+ +D + A+D + +++ L LG G K I +G+ N + +G KL AF
Sbjct: 246 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFK-IIRAIYGKPTA---NIILNGQKLEAFP 301
Query: 259 ---GLMQGSSLSPILYNLYTSQIYRHVTE 182
G QG LSP+L+N+ + R + +
Sbjct: 302 LKTGTRQGCPLSPLLFNIVLEVLARAIRQ 330
>U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGMYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKL-AFK 260
+ +D + A+D + +++ L LG G K I +Y + I+ N G KL AF
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPTANIRLN----GQKLEAFP 652
Query: 259 ---GLMQGSSLSPILYNLYTSQIYRHVTE 182
G QG LSP+L+N+ + R + +
Sbjct: 653 LKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposon
L1.2. ).
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein.
Length = 1192
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 514 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 567
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 568 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 598
>AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens
cDNA FLJ39824 fis, clone SPLEN2011981. ).
Length = 372
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 169 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 222
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 223 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 253
>AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 597 ISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKII------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein.
Length = 573
Score = 35.5 bits (78), Expect = 0.14
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A+D + +++ L LG G K I R++Y K N + +G KL A
Sbjct: 111 ISIDAEKAFDKIQQPFMLKTLNKLGIDGMYFKII------RAIYDKPTANIILNGQKLEA 164
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 165 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 195
>AK127459-1|BAC86988.1| 238|Homo sapiens protein ( Homo sapiens
cDNA FLJ45551 fis, clone BRTHA2037247. ).
Length = 238
Score = 32.7 bits (71), Expect = 0.95
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKL-AFK 260
+ +D + A++ + +++ L LG G LK I + R+ N + +G +L AF
Sbjct: 28 ISIDAEKAFNKIQHRFMLKTLNKLGIEGPCLKIIRAICDKRTA----NIILNGQQLEAFP 83
Query: 259 ---GLMQGSSLSPILYNLYTSQIYRHVTEL 179
G QG LSP+L+N+ + R + ++
Sbjct: 84 LKTGTRQGCPLSPLLFNIVLEVLARAIRQV 113
>U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 32.3 bits (70), Expect = 1.3
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-A 266
+ +D + A D + +++ L LG G K + R++Y K N + +G KL A
Sbjct: 597 ISIDAEKALDKIQQPFVLKTLNKLGIDGTYFKIM------RAIYDKPTANIILNGQKLEA 650
Query: 265 FK---GLMQGSSLSPILYNLYTSQIYRHVTE 182
F G QG LSP+L+N+ + R + +
Sbjct: 651 FPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
>AK096400-1|BAC04777.1| 644|Homo sapiens protein ( Homo sapiens
cDNA FLJ39081 fis, clone NT2RP7018340. ).
Length = 644
Score = 30.7 bits (66), Expect = 3.8
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Frame = -2
Query: 412 YDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-AFK---GLM 251
+D + +++ L LG G K I R++Y K N + +G KL AF G
Sbjct: 3 FDKIQQPFMLKTLIKLGIDGTYFKII------RAIYDKPTANIILNGQKLEAFPLKTGTR 56
Query: 250 QGSSLSPILYNLYTSQIYRHVTE 182
QG LSP+L+N+ + R + +
Sbjct: 57 QGCPLSPLLFNIVLEVLARAIRQ 79
>AK091740-1|BAC03736.1| 473|Homo sapiens protein ( Homo sapiens
cDNA FLJ34421 fis, clone HHDPC2002963. ).
Length = 473
Score = 30.7 bits (66), Expect = 3.8
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -2
Query: 424 VQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIK--YNNVFHGPKL-AFK-- 260
+Q A+D + +++ L LG G K I ++Y K N + +G KL AF
Sbjct: 1 MQKAFDKIQQPFMLKTLNKLGIDGTYFKII-------AIYDKPTANIILNGQKLEAFPLK 53
Query: 259 -GLMQGSSLSPILYNLYTSQIYRHVTE 182
G QG LSP+L+N+ + R + +
Sbjct: 54 TGTRQGCPLSPLLFNIVLEVLARAIRQ 80
>AK094887-1|BAC04450.1| 272|Homo sapiens protein ( Homo sapiens
cDNA FLJ37568 fis, clone BRCOC2002323. ).
Length = 272
Score = 30.3 bits (65), Expect = 5.1
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKLAFKG 257
+ +D + A++ + +++ L LG G +K I +Y I N L G
Sbjct: 3 ISIDAEKAFNKIKHPFMLKTLNKLGIDGTHIKIIRAIYDKPIANIILNGQKLEGFLLTTG 62
Query: 256 LMQGSSLSPILYNL 215
QG LSP+L+N+
Sbjct: 63 TRQGCPLSPLLFNI 76
>U80164-1|AAC51079.1| 102|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 102
Score = 29.5 bits (63), Expect = 8.9
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 354 PGKPKEYSTLINW*RSTLSYAPCTSRKTQIAVEPDNKHFFISVRNV 491
PGK E+ IN+ ST Y P + I+V+ HF + VR+V
Sbjct: 43 PGKGLEWIGDINYSGSTY-YNPSLKSRVTISVDRSKNHFSLKVRSV 87
>AK127765-1|BAC87120.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ45866 fis, clone OCBBF3001616. ).
Length = 184
Score = 29.5 bits (63), Expect = 8.9
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = -2
Query: 436 VFLDVQGAYDNVDLHQLIRVLYSLGFPGKLLKWIFNMYFGRSLYIKYNNVFHGPKL-AFK 260
+ +D + A++ + +I+ + + G L I +Y + N + +G KL AF
Sbjct: 43 ISIDAEKAFEEIQHRFMIKTVSKISIQGTYLNVIKAIYDKPTA----NMILNGEKLKAFP 98
Query: 259 ---GLMQGSSLSPILYNLYTSQIYRHVTE 182
G QG LSP+L+N+ + R + +
Sbjct: 99 LRIGTRQGCPLSPLLFNIALEVLTRAIRQ 127
>AF103294-1|AAD30854.1| 121|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 121
Score = 29.5 bits (63), Expect = 8.9
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 358 PGKLLKWIFNMYFGRSLY 305
PGK L+WI NMY+G + Y
Sbjct: 33 PGKGLQWIANMYYGGNRY 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,288,136
Number of Sequences: 237096
Number of extensions: 1871720
Number of successful extensions: 4883
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4883
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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