Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c04r
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   1.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.0  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   2.6  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   8.1  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -2

Query: 387 LLTLYSIGSHQNSSDRHLR 331
           L+ +YSIG+ ++  ++HLR
Sbjct: 198 LIVVYSIGAKKSPPEKHLR 216


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
 Frame = +2

Query: 122 GSQALDNTFQMTLHK---GYK*VVYYQRW 199
           G +  DN+   T  K   GYK V YY  W
Sbjct: 68  GHRKTDNSLSATSKKDKDGYKVVCYYTNW 96


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = +2

Query: 182 VYYQR-WQSVHLTKKMLL 232
           VY  R WQ +HL KK +L
Sbjct: 531 VYNHRPWQQLHLNKKQIL 548


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 614 THKYIQKYTNSKLHN 658
           THKY  KY N  L N
Sbjct: 23  THKYTTKYDNIDLEN 37


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 662 HHCVVYCLCTFVYICV 615
           H C  +CL   ++ CV
Sbjct: 8   HLCAQFCLLAAIFTCV 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,448
Number of Sequences: 336
Number of extensions: 4239
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)