Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c04r
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   2.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.9  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +2

Query: 128 QALDNTFQMTLHKGYK*VVYYQ--RWQSVHLTK-KMLLICQY 244
           + LD   Q+   KG+  V+Y +  RW  +H  + K +  CQ+
Sbjct: 75  RTLDGRLQVAGRKGFPHVIYARIWRWPDLHKNELKHVKFCQF 116


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +2

Query: 14   TTTINYVHIGVNLLSPNPMFCRIKFLSNAINAPYG*GSQALDNTFQMTLHKGY 172
            T++ NY    V+L S   MF R+K         +G   QA +++   T  K +
Sbjct: 1220 TSSYNYHPRDVHLSSEGAMFYRVKVAPGDNEKRFGWYEQATNSSTGATTKKSF 1272


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 795,411
Number of Sequences: 2352
Number of extensions: 16894
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)