Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c04f
(599 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36... 40 0.002
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 40 0.002
11_03_0201 + 11578163-11578915 35 0.043
12_02_0637 - 21437244-21438080 35 0.057
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 35 0.057
10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834 35 0.057
10_02_0198 - 6611775-6612611 35 0.057
08_02_0235 + 14627648-14628889 35 0.057
07_01_1086 - 9930311-9931993 35 0.057
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 35 0.057
09_02_0555 - 10588685-10592038 34 0.076
06_02_0319 + 14306464-14306577,14306623-14307117 34 0.076
03_02_1029 - 13488535-13493037 34 0.076
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 34 0.100
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 33 0.13
10_01_0300 - 3257584-3258825 33 0.17
01_04_0007 - 15038268-15039062,15039177-15039711,15039887-150399... 33 0.17
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753... 33 0.23
12_02_0214 + 15750620-15751273 32 0.31
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 32 0.40
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 31 0.53
08_01_0749 + 7063297-7064370 31 0.70
06_03_0557 + 22133604-22134506 29 2.8
03_01_0227 - 1797353-1798519 29 2.8
01_01_0888 + 6990354-6991862,6991970-6992431 29 2.8
11_04_0272 - 15631598-15631898,15633162-15633291,15636394-156365... 29 3.8
10_05_0046 + 8516043-8516425,8517908-8518019,8518276-8518377,851... 29 3.8
02_02_0490 - 10879761-10879861,10879946-10880185,10880274-108803... 28 5.0
07_03_1567 - 27772815-27773302,27773471-27773561,27773641-277739... 28 6.6
01_01_1022 - 8064032-8064657,8064823-8064893,8065926-8066047,806... 28 6.6
01_01_0566 - 4166511-4166632,4167302-4167375,4167509-4167648,416... 28 6.6
>10_01_0028 -
359988-359996,360228-360332,360415-360536,360676-360763,
360988-361056,361132-361461,361544-361610,361695-361753,
361838-362056,362224-362289,362370-362500,362683-362782,
362864-363001,363111-363218,363627-363723,363806-364257
Length = 719
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/27 (55%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 154 LEYYLKWKGYSDEDNTWEPEDNL-DCP 231
L + ++WKGY E++TWEP +NL DCP
Sbjct: 434 LYFKVQWKGYGREEDTWEPIENLRDCP 460
>03_02_0234 +
6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 KNGVLEYYLKWKGYSDEDNTWEPEDNL-DCPDLIQ 243
KNG L + ++WKGY +TWEP D L DCP+ I+
Sbjct: 576 KNG-LWFKVRWKGYDPSYDTWEPIDGLSDCPERIK 609
>11_03_0201 + 11578163-11578915
Length = 250
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 DRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
+RR +N V +Y ++W +S+E+ TWE ED L
Sbjct: 199 ERRTRNKVTRFYRVQWSHHSEEEATWEREDEL 230
>12_02_0637 - 21437244-21438080
Length = 278
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 DRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
+RR +N V+ + ++W +S+E++TWE ED L
Sbjct: 227 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 258
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 DRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
+RR +N V+ + ++W +S+E++TWE ED L
Sbjct: 530 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 561
>10_05_0084 + 8956637-8956681,8957722-8957856,8958040-8958834
Length = 324
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 DRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
+RR +N V+ + ++W +S+E++TWE ED L
Sbjct: 273 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 304
>10_02_0198 - 6611775-6612611
Length = 278
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 DRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
+RR +N V+ + ++W +S+E++TWE ED L
Sbjct: 227 ERRTRNRVIHFCKVQWSNHSEEESTWEREDEL 258
>08_02_0235 + 14627648-14628889
Length = 413
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 DRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
+RR +N V+ + ++W +S+E++TWE ED L
Sbjct: 362 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 393
>07_01_1086 - 9930311-9931993
Length = 560
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 DRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
+RR +N V+ + ++W +S+E++TWE ED L
Sbjct: 509 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 540
>04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 DRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
+RR +N V+ + ++W +S+E++TWE ED L
Sbjct: 1237 ERRTRNRVIRFCKVQWSNHSEEESTWEREDEL 1268
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +1
Query: 127 LDRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNLDC--PDL 237
++RR +N V+ + ++W +++E+ TWE ED L PDL
Sbjct: 1065 MERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPDL 1104
>06_02_0319 + 14306464-14306577,14306623-14307117
Length = 202
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +1
Query: 127 LDRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNLDC--PDL 237
++RR +N V+ + ++W +++E+ TWE ED L PDL
Sbjct: 150 IERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPDL 189
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +1
Query: 127 LDRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNLDC--PDL 237
++RR +N V+ + ++W +++E+ TWE ED L PDL
Sbjct: 1448 MERRTRNRVIRFCKVQWSNHAEEEATWEREDELKAAHPDL 1487
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 33.9 bits (74), Expect = 0.100
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Frame = +1
Query: 127 LDRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNLDC--PDL 237
++RR +N V+ + ++W +++E+ TWE ED L PDL
Sbjct: 622 MERRTRNRVIRFCKVQWSNHAEEEATWEREDELKTAHPDL 661
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 124 VLDRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
V +R +N V+ + ++W +S+E++TWE ED L
Sbjct: 1623 VSERNTRNRVIRFCKVQWSNHSEEESTWEREDEL 1656
>10_01_0300 - 3257584-3258825
Length = 413
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 DRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
+RR +N V+ + ++W +S+E++TWE ED L
Sbjct: 362 ERRTRNRVICFCKVQWSNHSEEESTWEREDEL 393
>01_04_0007 -
15038268-15039062,15039177-15039711,15039887-15039936,
15040376-15040446,15040683-15040731
Length = 499
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 DRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
+RR +N V + ++W +SDE+ TWE ED L
Sbjct: 448 ERRTRNKVTSFCRVQWSHHSDEEATWEREDEL 479
>05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,
7535889-7535932,7536042-7536146,7536223-7536344,
7536807-7536894,7536966-7537052,7537718-7537786,
7537859-7538188,7539777-7539824,7540003-7540069,
7540150-7540208,7541220-7541453,7541536-7541601,
7541684-7541883,7542104-7542197,7542295-7542414,
7542596-7542703,7542808-7542871,7543378-7543409,
7546049-7548007
Length = 1407
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 142 KNGVLEYYLKWKGYSDEDNTWEPEDNL-DCPDLIQ 243
K+G L + ++WKGY +TWEP + L +C + I+
Sbjct: 953 KHG-LYFKVRWKGYGPHHDTWEPVEGLRNCKEAIR 986
>12_02_0214 + 15750620-15751273
Length = 217
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 124 VLDRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
V +R +N V+ + ++W +S+E+ TWE ED L
Sbjct: 164 VSERNTRNRVIRFCKVQWSNHSEEEATWEREDEL 197
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 133 RRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
RR +N V+ + ++W +S+E+ TWE ED L
Sbjct: 523 RRTRNKVIRFCKVQWSHHSEEEATWEREDEL 553
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 31.5 bits (68), Expect = 0.53
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 133 RRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 222
R+ G EYY+KWK + ++ TWE + ++
Sbjct: 160 RKSSTGEREYYVKWKELTYDECTWENDSDI 189
>08_01_0749 + 7063297-7064370
Length = 357
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 124 VLDRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
V +R +N V + ++W +S+E+ TWE ED L
Sbjct: 304 VSERNTRNRVTRFCKVQWSNHSEEEATWEREDEL 337
>06_03_0557 + 22133604-22134506
Length = 300
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/32 (31%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 DRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
+R+ + +++Y ++W +S+++ TWE ED L
Sbjct: 260 ERQTRRKTIKFYKVQWTNHSEDEATWEREDLL 291
>03_01_0227 - 1797353-1798519
Length = 388
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 148 GVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQ 243
G EY +KW E+ TWEP +N+D +L+Q
Sbjct: 337 GKWEYLVKWVDI--EEATWEPAENVDA-ELLQ 365
>01_01_0888 + 6990354-6991862,6991970-6992431
Length = 656
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -3
Query: 546 IKLNNYLWAPHISLFCWYKICFICSLPFHEE---HEFTTTIRSANYFF 412
+K+N LW ++L C + C + F+ E E+ +R N+FF
Sbjct: 299 VKINLVLWCVSVALMCAVSALYACKVAFYFEAVRREYYHPVR-VNFFF 345
>11_04_0272 -
15631598-15631898,15633162-15633291,15636394-15636544,
15636632-15636730,15636912-15637063,15637079-15637301
Length = 351
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 124 VLDRRIKNGVLEYY-LKWKGYSDEDNTWEPEDNL 222
V D + +N + + ++W Y+ ++ TWE ED+L
Sbjct: 207 VTDLKTRNQTIRFLKVQWSHYTMDEATWEKEDDL 240
>10_05_0046 +
8516043-8516425,8517908-8518019,8518276-8518377,
8518605-8518657,8518976-8519062,8519162-8519830,
8520154-8520214,8520295-8520342
Length = 504
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 175 KGYSDEDNTWEPEDNLD-CPDLI 240
+G+ + NTWEP +NL C D+I
Sbjct: 218 RGWPESANTWEPLENLSACSDII 240
>02_02_0490 -
10879761-10879861,10879946-10880185,10880274-10880337,
10880426-10880731,10881098-10881312,10881417-10881711,
10882193-10882357,10882477-10882527,10882657-10883109,
10883195-10883281,10883736-10884800,10884858-10885376
Length = 1186
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -1
Query: 572 GVCHVSLSS*N*ITTCGHRTLACFAGTRSASSVPCHFMRNMSSPLL 435
GVC L + G + CF R + HFM N+S P L
Sbjct: 795 GVCRAPLMQHFAESVAGSNIIRCFGKERQFINYVSHFMDNLSRPSL 840
>07_03_1567 -
27772815-27773302,27773471-27773561,27773641-27773988,
27774929-27775110,27775191-27775368,27775453-27775605,
27775993-27776232,27776369-27776449,27776485-27776730,
27777151-27777240,27777536-27777778,27778365-27778529,
27779017-27779080,27779162-27779286,27779383-27779476,
27779647-27779714,27779798-27779989,27780618-27780752,
27780847-27780934,27781014-27781107,27781484-27781547,
27781657-27781708,27781911-27782014,27782099-27782158,
27782687-27782770,27782892-27783125,27783442-27783864,
27784675-27784736,27784867-27785521
Length = 1700
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 151 VLEYYLKWKGYSDEDNTWEPEDNLD 225
V EY +KW+G ++TWE + +++
Sbjct: 524 VPEYLVKWQGLPYAESTWEKDTDIE 548
>01_01_1022 -
8064032-8064657,8064823-8064893,8065926-8066047,
8066540-8066689,8067153-8067179,8067485-8067552,
8067679-8067874
Length = 419
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 436 SSGELMFLMKWQGTD-EADLVPAKQANVRCPQ 528
SSG + MKW GTD + PAK N P+
Sbjct: 296 SSGLSLQTMKWWGTDSHTETTPAKDDNGEAPE 327
>01_01_0566 -
4166511-4166632,4167302-4167375,4167509-4167648,
4167731-4167802,4167915-4167984,4168112-4168185,
4168316-4168487,4168887-4168976,4169151-4169175,
4169273-4169432,4169855-4170265,4170443-4170559
Length = 508
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 486 CFICSLPFHEEHEFTTTIRSANYFFWF*STIKTR 385
CF+ SL F+ + ++ +F F ST++TR
Sbjct: 157 CFVSSLQFNSDFSLRFSLHFLFFFVMFLSTVRTR 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,341,280
Number of Sequences: 37544
Number of extensions: 220920
Number of successful extensions: 592
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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