Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c02r
(756 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 181 5e-46
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 160 1e-39
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 85 8e-17
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 83 2e-16
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 82 5e-16
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889... 72 6e-13
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 64 2e-10
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 49 3e-06
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 47 1e-05
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 38 0.011
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 32 0.43
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278... 29 3.0
12_01_0079 + 644754-645932,645966-646061,646193-647122 28 7.0
11_01_0078 + 609005-610183,610217-610312,610444-611373 28 7.0
09_02_0229 - 6062825-6064899,6064943-6065432,6065479-6065956,606... 28 7.0
05_04_0454 + 21383068-21384525 28 7.0
12_01_0814 - 7483597-7483818,7484136-7484276,7484370-7484444,748... 28 9.2
06_01_1121 + 9232333-9232857,9233383-9234174 28 9.2
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 28 9.2
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 181 bits (441), Expect = 5e-46
Identities = 84/123 (68%), Positives = 102/123 (82%)
Frame = -3
Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
VVPVIR+ NM +ADIE I LA+KA G L+I+EM GGTFTISNGGV+GSL+ TPIIN
Sbjct: 315 VVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISNGGVYGSLISTPIIN 374
Query: 574 PPQSAILGMHGIFERPIALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDPA 395
PPQSAILGMH I +RP+ ++G ++ RPMMY+ALTYDHRLIDGREAV FLR+IK+ VEDP
Sbjct: 375 PPQSAILGMHSIVQRPVVVDGNILARPMMYLALTYDHRLIDGREAVYFLRRIKDVVEDPR 434
Query: 394 TIV 386
++
Sbjct: 435 RLL 437
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 160 bits (389), Expect = 1e-39
Identities = 78/123 (63%), Positives = 94/123 (76%)
Frame = -3
Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
VV VI + M +ADIE I LA+KA G +I M GGTFTISNGGV+GSL+ TPIIN
Sbjct: 287 VVLVIHDIDAMNFADIEKGINNLAKKATEGAQSINNMAGGTFTISNGGVYGSLISTPIIN 346
Query: 574 PPQSAILGMHGIFERPIALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDPA 395
PQS+ILGMH I +R + +NG V+ RPMMY+AL YDHRLIDGREAVLFLR+IK+ VEDP
Sbjct: 347 SPQSSILGMHSIVQRLVVVNGSVLARPMMYLALMYDHRLIDGREAVLFLRRIKDVVEDPR 406
Query: 394 TIV 386
++
Sbjct: 407 RLL 409
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 84.6 bits (200), Expect = 8e-17
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Frame = -3
Query: 751 VPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISN-GGVFGSLMGTPIIN 575
VPVIR+ A I + LA++AR L E+ +GGTFT+SN GG FG I+N
Sbjct: 376 VPVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGTFTVSNLGGPFGIKQFCAIVN 435
Query: 574 PPQSAILGMHGIFERPI-ALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDP 398
PPQSAIL + +R I GQ + M L+ DHR+IDG +++ K +E+P
Sbjct: 436 PPQSAILAIGSAEKRVIPGAEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFKGYIENP 495
Query: 397 ATIV 386
T++
Sbjct: 496 TTML 499
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 83.4 bits (197), Expect = 2e-16
Identities = 52/126 (41%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Frame = -3
Query: 751 VPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISN-GGVFGSLMGTPIIN 575
VPVIR+ I + LA++AR L ++ +GGTFTISN GG FG IIN
Sbjct: 416 VPVIRDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTFTISNLGGPFGIKQFCAIIN 475
Query: 574 PPQSAILGMHGIFER---PIALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVE 404
PPQSAIL + G ER P + NGQ M ++ DHR+IDG FL+ K +E
Sbjct: 476 PPQSAILAI-GSAERRVIPGSANGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIE 534
Query: 403 DPATIV 386
+P +++
Sbjct: 535 NPTSML 540
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 81.8 bits (193), Expect = 5e-16
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = -3
Query: 751 VPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISN-GGVFGSLMGTPIIN 575
VPVIR+ I + +A++AR L E+ +GGTFTISN GG FG IIN
Sbjct: 1922 VPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTFTISNLGGPFGIKQFCAIIN 1981
Query: 574 PPQSAILGMHGIFER--PIALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVED 401
PPQSAIL + +R P +++GQ M ++ DHR+IDG FL+ K +E+
Sbjct: 1982 PPQSAILAIGTAEKRVIPGSVDGQYEFGSFMSATMSCDHRVIDGAIGAEFLKAFKGYIEN 2041
Query: 400 PATIV 386
P +++
Sbjct: 2042 PNSML 2046
>01_03_0030 -
11787280-11787393,11787487-11787714,11788828-11788916,
11789516-11789763,11789858-11790146,11790295-11790454,
11791228-11791404
Length = 434
Score = 71.7 bits (168), Expect = 6e-13
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Frame = -3
Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
VVP I+N Q+++ +I ++ L E A +L+ E++ GGT T+SN G G G+P++N
Sbjct: 307 VVPNIKNVQSLSILEITKELSRLHEMASHNRLSTEDIAGGTITLSNIGAIGGKFGSPLLN 366
Query: 574 PPQSAILGMHGIFERPIALNGQVVIRPMMYIALTY--DHRLIDGREAVLFLRKIKEGVED 401
P+ AI+ + I + P + + P I +T DHR++DG F + K VE
Sbjct: 367 LPEVAIIALGRIQKLP-RFDDDENVYPSSIINVTVGADHRVVDGATVARFCNEWKSLVEK 425
Query: 400 PATIV 386
P ++
Sbjct: 426 PERLL 430
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 63.7 bits (148), Expect = 2e-10
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = -3
Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
+ PV+ + + + GL +KAR +L +E GTFT+SN G+FG I+
Sbjct: 366 LTPVLEDVDKLDVYLLAQKWRGLLKKARMKQLQPDEYSSGTFTLSNLGMFGVDRFDAILP 425
Query: 574 PPQSAILGMHGIFERPIA-LNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDP 398
P Q AI+ + G +A +G I+ M + +T DHR+I G + FL+ + +EDP
Sbjct: 426 PGQGAIMAVGGSRPTLVANKDGFFSIKNEMLVNVTADHRIIYGADLAAFLQTFAKIIEDP 485
Query: 397 ATI 389
++
Sbjct: 486 ESL 488
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Frame = -3
Query: 739 RNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGT--FTISNGGVFGSLMGTPIINPPQ 566
+ Q Y + + I + K +T +EM T FTISN G+FG I+ P
Sbjct: 372 KQLQPHEYNSVYVKIDSVLIKLQTHYSAFDEMQKKTCTFTISNLGMFGVDRFDAILPPGT 431
Query: 565 SAILGMHGIFERPIAL-NGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDP 398
AI+ + + +G + I+ M + +T DHR+I G + FL+ + + +EDP
Sbjct: 432 GAIMAVGSSQPTLVGTKDGSIGIKNQMQVNVTADHRVIYGADLAAFLQTLSKIIEDP 488
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/103 (32%), Positives = 47/103 (45%)
Frame = -3
Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
+ P+IRN T + I + LAEKAR GKL E GGTF + G+ G II
Sbjct: 450 MTPIIRNADQKTISAISSEVKQLAEKARAGKLAPNEFQGGTF--RHSGILAVGRGNKIIE 507
Query: 574 PPQSAILGMHGIFERPIALNGQVVIRPMMYIALTYDHRLIDGR 446
P ++ G + + M + L+ DHR+ DG+
Sbjct: 508 P----VVDSDG--------TEKATVVTKMSLTLSADHRVFDGQ 538
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -3
Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
+ PV+ + + + L +KAR +L E GTFT+SN G+FG I+
Sbjct: 351 ITPVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTLSNLGMFGVDRFDAILP 410
Query: 574 PPQSAILGM 548
P Q I+ +
Sbjct: 411 PGQGGIMAV 419
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 484 IALTYDHRLIDGREAVLFLRKIKEGVEDPATI 389
+ +T DHR++ G + FL+ + +EDP ++
Sbjct: 474 VNVTADHRIVYGADLAAFLQTFAKIIEDPESL 505
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 32.3 bits (70), Expect = 0.43
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = -2
Query: 707 RAHHSWASGKSENR*AHDRRNG----RRNVHHQQWRRFRVSDGNANHQSASICYT-GYAR 543
R H +SE R HDR RR H + RR R DG+ H+S S + G R
Sbjct: 101 RDRHREHRDRSERREHHDRERSDDRDRRRGHDSERRRDRDRDGHRRHRSRSRSPSKGRDR 160
Query: 542 HLRAAHRSERPSRDQAHD 489
R+ RS R D
Sbjct: 161 RSRSRSRSRSSKRVSGFD 178
>08_02_0969 -
23126389-23126670,23126764-23126947,23127017-23127834,
23127953-23128642
Length = 657
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 632 VHHQQWRRFRVSDGNANHQSASICYTGYARHLRAAHRSER 513
VH QWR + + G+A +C G + HL A +ER
Sbjct: 103 VHFIQWRSLKNAAGSALMYRVKLCLDGVSMHLWAPDIAER 142
>12_01_0079 + 644754-645932,645966-646061,646193-647122
Length = 734
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 530 AHRSERPSRDQ-AHDVYCPNLRPQADRRPRSCTLPQKDQ 417
A RS R ++ AH + LR A RR R+C P +DQ
Sbjct: 57 ARRSARLREERRAHALQLHKLRKTATRRCRNCNNPYRDQ 95
>11_01_0078 + 609005-610183,610217-610312,610444-611373
Length = 734
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 530 AHRSERPSRDQ-AHDVYCPNLRPQADRRPRSCTLPQKDQ 417
A RS R ++ AH + LR A RR R+C P +DQ
Sbjct: 57 ARRSARLREERRAHALQLHKLRKTATRRCRNCNNPYRDQ 95
>09_02_0229 -
6062825-6064899,6064943-6065432,6065479-6065956,
6066333-6066382,6068917-6069172,6069358-6069503
Length = 1164
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 451 RLSACGRKLGQYTSWA*SRLGRSERWAARR 540
R +ACG K G W R R ++W A+R
Sbjct: 16 RTAACGWKDGSGQRWELGRAARIQQWGAQR 45
>05_04_0454 + 21383068-21384525
Length = 485
Score = 28.3 bits (60), Expect = 7.0
Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Frame = -2
Query: 755 RRAGHQKRSEHDLC*YRAHHSWASGKSENR*AHDRRNGRRNVHHQQWRRFRVSDGNANHQ 576
R AG S H+ R+HH +A +S ++ N RR + ++ + + Q
Sbjct: 222 RLAGSPSTSHHERS-MRSHHPYAM-RSGGTPRNNNNNNRRRPRRPMRQGYKYNGHDQRGQ 279
Query: 575 SASICYTGYARHLRAAHRSERPS-----RDQAHDVYCPNLRPQ 462
Y+ R + + +R RDQ H VY N Q
Sbjct: 280 QQVNNYSHGQRQVYGNGQDQRQQLNNNGRDQRHQVYSSNCHDQ 322
>12_01_0814 -
7483597-7483818,7484136-7484276,7484370-7484444,
7484706-7484882,7485530-7485685,7485781-7485864,
7486589-7486661,7487744-7487946,7488046-7488124,
7488326-7488464,7488559-7488646
Length = 478
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = -3
Query: 538 FERPIALNGQVVIRPMMYIALTYDHRLIDGREAVL 434
F+R + + G+V++R A++Y H+L+ +E V+
Sbjct: 125 FDRDLTVAGRVIVREKKDGAVSYAHKLVRVQEPVM 159
>06_01_1121 + 9232333-9232857,9233383-9234174
Length = 438
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 377 QASDDSGGIFDAFLDLSEEEYSFA-AVYQPVVVS*GNIHHGP 499
Q+SD +GG++D +LD + ++ A A + VVVS N + P
Sbjct: 215 QSSDPAGGMWDLYLDEPDAAWATAVAGFDYVVVSTANWFNRP 256
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -2
Query: 710 YRAHHSWASGKSENR*AHDRRNGRRNVHHQQWRRFRVSDGNANHQ 576
+R HH +SG + +R R HH+ SD N NH+
Sbjct: 1238 HRHHHHRSSGDDSGSESEERGRSRHKKHHRSSDEDATSDSN-NHK 1281
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,379,875
Number of Sequences: 37544
Number of extensions: 370398
Number of successful extensions: 935
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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