Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c02r
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003564-1|AAO39568.1|  468|Drosophila melanogaster LP03989p pro...   219   3e-57
AY089515-1|AAL90253.1|  468|Drosophila melanogaster GM01350p pro...   219   3e-57
AE014297-1281|AAF54625.1|  468|Drosophila melanogaster CG5214-PA...   219   3e-57
BT024948-1|ABE01178.1|  224|Drosophila melanogaster IP16013p pro...    78   1e-14
BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p pro...    78   1e-14
AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA...    78   1e-14
AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB...    78   1e-14
AY061469-1|AAL29017.1|  462|Drosophila melanogaster LD43554p pro...    67   2e-11
AE014298-2103|AAF48423.1|  462|Drosophila melanogaster CG5599-PA...    67   2e-11
BT023755-1|AAZ41763.1|  974|Drosophila melanogaster RE58921p pro...    29   6.8  
AE014298-2125|AAX52496.1|  974|Drosophila melanogaster CG6146-PC...    29   6.8  
AE014298-2124|AAF48440.1|  974|Drosophila melanogaster CG6146-PA...    29   6.8  

>BT003564-1|AAO39568.1|  468|Drosophila melanogaster LP03989p
           protein.
          Length = 468

 Score =  219 bits (536), Expect = 3e-57
 Identities = 103/126 (81%), Positives = 114/126 (90%)
 Frame = -3

Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
           VVPVIRN + M YADIE+ +AGLA+KAR   +T+E+MDGGTFTISNGGVFGSLMGTPIIN
Sbjct: 343 VVPVIRNVEGMNYADIEIALAGLADKARRDAITVEDMDGGTFTISNGGVFGSLMGTPIIN 402

Query: 574 PPQSAILGMHGIFERPIALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDPA 395
           PPQSAILGMHGIFERPIA+ G+V IRPMMYIALTYDHR+IDGREAVLFLRKIK  VE+PA
Sbjct: 403 PPQSAILGMHGIFERPIAVKGEVKIRPMMYIALTYDHRIIDGREAVLFLRKIKAAVENPA 462

Query: 394 TIVAGL 377
            IVAGL
Sbjct: 463 IIVAGL 468


>AY089515-1|AAL90253.1|  468|Drosophila melanogaster GM01350p
           protein.
          Length = 468

 Score =  219 bits (536), Expect = 3e-57
 Identities = 103/126 (81%), Positives = 114/126 (90%)
 Frame = -3

Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
           VVPVIRN + M YADIE+ +AGLA+KAR   +T+E+MDGGTFTISNGGVFGSLMGTPIIN
Sbjct: 343 VVPVIRNVEGMNYADIEIALAGLADKARRDAITVEDMDGGTFTISNGGVFGSLMGTPIIN 402

Query: 574 PPQSAILGMHGIFERPIALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDPA 395
           PPQSAILGMHGIFERPIA+ G+V IRPMMYIALTYDHR+IDGREAVLFLRKIK  VE+PA
Sbjct: 403 PPQSAILGMHGIFERPIAVKGEVKIRPMMYIALTYDHRIIDGREAVLFLRKIKAAVENPA 462

Query: 394 TIVAGL 377
            IVAGL
Sbjct: 463 IIVAGL 468


>AE014297-1281|AAF54625.1|  468|Drosophila melanogaster CG5214-PA
           protein.
          Length = 468

 Score =  219 bits (536), Expect = 3e-57
 Identities = 103/126 (81%), Positives = 114/126 (90%)
 Frame = -3

Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
           VVPVIRN + M YADIE+ +AGLA+KAR   +T+E+MDGGTFTISNGGVFGSLMGTPIIN
Sbjct: 343 VVPVIRNVEGMNYADIEIALAGLADKARRDAITVEDMDGGTFTISNGGVFGSLMGTPIIN 402

Query: 574 PPQSAILGMHGIFERPIALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDPA 395
           PPQSAILGMHGIFERPIA+ G+V IRPMMYIALTYDHR+IDGREAVLFLRKIK  VE+PA
Sbjct: 403 PPQSAILGMHGIFERPIAVKGEVKIRPMMYIALTYDHRIIDGREAVLFLRKIKAAVENPA 462

Query: 394 TIVAGL 377
            IVAGL
Sbjct: 463 IIVAGL 468


>BT024948-1|ABE01178.1|  224|Drosophila melanogaster IP16013p
           protein.
          Length = 224

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
 Frame = -3

Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
           + P++ N       +I   +  LA KAR  KL   E  GGT ++SN G+FG      +IN
Sbjct: 98  ITPIVFNADRKGVLEISKDVKALAAKARDNKLQPHEFQGGTISVSNLGMFGVNQFAAVIN 157

Query: 574 PPQSAILGM----HGIFERPIALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGV 407
           PPQS IL +      +   P +L G   +  M+ + L+ DHR++DG  A  +L+  ++ +
Sbjct: 158 PPQSCILAIGTTTKQLVADPDSLKGFKEVN-MLTVTLSADHRVVDGAVAARWLQHFRDYM 216

Query: 406 EDPATIV 386
           EDP+ +V
Sbjct: 217 EDPSNMV 223


>BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p
           protein.
          Length = 512

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
 Frame = -3

Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
           + P++ N       +I   +  LA KAR  KL   E  GGT ++SN G+FG      +IN
Sbjct: 386 ITPIVFNADRKGVLEISKDVKALAAKARDNKLQPHEFQGGTISVSNLGMFGVNQFAAVIN 445

Query: 574 PPQSAILGM----HGIFERPIALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGV 407
           PPQS IL +      +   P +L G   +  M+ + L+ DHR++DG  A  +L+  ++ +
Sbjct: 446 PPQSCILAIGTTTKQLVADPDSLKGFKEVN-MLTVTLSADHRVVDGAVAARWLQHFRDYM 504

Query: 406 EDPATIV 386
           EDP+ +V
Sbjct: 505 EDPSNMV 511


>AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA,
           isoform A protein.
          Length = 421

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
 Frame = -3

Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
           + P++ N       +I   +  LA KAR  KL   E  GGT ++SN G+FG      +IN
Sbjct: 295 ITPIVFNADRKGVLEISKDVKALAAKARDNKLQPHEFQGGTISVSNLGMFGVNQFAAVIN 354

Query: 574 PPQSAILGM----HGIFERPIALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGV 407
           PPQS IL +      +   P +L G   +  M+ + L+ DHR++DG  A  +L+  ++ +
Sbjct: 355 PPQSCILAIGTTTKQLVADPDSLKGFKEVN-MLTVTLSADHRVVDGAVAARWLQHFRDYM 413

Query: 406 EDPATIV 386
           EDP+ +V
Sbjct: 414 EDPSNMV 420


>AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB,
           isoform B protein.
          Length = 512

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
 Frame = -3

Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
           + P++ N       +I   +  LA KAR  KL   E  GGT ++SN G+FG      +IN
Sbjct: 386 ITPIVFNADRKGVLEISKDVKALAAKARDNKLQPHEFQGGTISVSNLGMFGVNQFAAVIN 445

Query: 574 PPQSAILGM----HGIFERPIALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGV 407
           PPQS IL +      +   P +L G   +  M+ + L+ DHR++DG  A  +L+  ++ +
Sbjct: 446 PPQSCILAIGTTTKQLVADPDSLKGFKEVN-MLTVTLSADHRVVDGAVAARWLQHFRDYM 504

Query: 406 EDPATIV 386
           EDP+ +V
Sbjct: 505 EDPSNMV 511


>AY061469-1|AAL29017.1|  462|Drosophila melanogaster LD43554p
           protein.
          Length = 462

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
 Frame = -3

Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
           VVP I+N Q  T  +I   +  L E+ RTG L+  +   GTF++SN GV G     P I 
Sbjct: 337 VVPNIKNCQTKTIIEIAKDLNALVERGRTGSLSPADFADGTFSLSNIGVIGGTYTHPCIM 396

Query: 574 PPQSAILGMHGIFERPIALN--GQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVED 401
            PQ AI G  G  +     N   +VV   +M ++ + DHR+IDG     F    K+ +E+
Sbjct: 397 APQVAI-GAMGRTKAVPRFNDKDEVVKAYVMSVSWSADHRVIDGVTMASFSNVWKQYLEN 455

Query: 400 PA 395
           PA
Sbjct: 456 PA 457


>AE014298-2103|AAF48423.1|  462|Drosophila melanogaster CG5599-PA
           protein.
          Length = 462

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
 Frame = -3

Query: 754 VVPVIRNXQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIIN 575
           VVP I+N Q  T  +I   +  L E+ RTG L+  +   GTF++SN GV G     P I 
Sbjct: 337 VVPNIKNCQTKTIIEIAKDLNALVERGRTGSLSPADFADGTFSLSNIGVIGGTYTHPCIM 396

Query: 574 PPQSAILGMHGIFERPIALN--GQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVED 401
            PQ AI G  G  +     N   +VV   +M ++ + DHR+IDG     F    K+ +E+
Sbjct: 397 APQVAI-GAMGRTKAVPRFNDKDEVVKAYVMSVSWSADHRVIDGVTMASFSNVWKQYLEN 455

Query: 400 PA 395
           PA
Sbjct: 456 PA 457


>BT023755-1|AAZ41763.1|  974|Drosophila melanogaster RE58921p
           protein.
          Length = 974

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = -2

Query: 701 HHSWASGKSENR*AHDRRNGRRNVHHQQWRRFRVSD-GNANHQSASICYTGYARHLRAAH 525
           HH  +S   E R     R    +  H+     R  +  +++H+S+S   +  ++H  + H
Sbjct: 135 HHKRSSKDKERRDKDKDRGSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKSKHSSSRH 194

Query: 524 RSERPSRDQ 498
            S   S+DQ
Sbjct: 195 SSSSSSKDQ 203


>AE014298-2125|AAX52496.1|  974|Drosophila melanogaster CG6146-PC,
           isoform C protein.
          Length = 974

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = -2

Query: 701 HHSWASGKSENR*AHDRRNGRRNVHHQQWRRFRVSD-GNANHQSASICYTGYARHLRAAH 525
           HH  +S   E R     R    +  H+     R  +  +++H+S+S   +  ++H  + H
Sbjct: 135 HHKRSSKDKERRDKDKDRGSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKSKHSSSRH 194

Query: 524 RSERPSRDQ 498
            S   S+DQ
Sbjct: 195 SSSSSSKDQ 203


>AE014298-2124|AAF48440.1|  974|Drosophila melanogaster CG6146-PA,
           isoform A protein.
          Length = 974

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = -2

Query: 701 HHSWASGKSENR*AHDRRNGRRNVHHQQWRRFRVSD-GNANHQSASICYTGYARHLRAAH 525
           HH  +S   E R     R    +  H+     R  +  +++H+S+S   +  ++H  + H
Sbjct: 135 HHKRSSKDKERRDKDKDRGSSSSSRHKSSSSSRDKERSSSSHKSSSSSSSSKSKHSSSRH 194

Query: 524 RSERPSRDQ 498
            S   S+DQ
Sbjct: 195 SSSSSSKDQ 203


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,453,808
Number of Sequences: 53049
Number of extensions: 618037
Number of successful extensions: 2017
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2011
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)