Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11c02r
         (756 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.4  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 308 LRLVTVILLSSFVMVGWCL 364
           ++L+ ++LLSS V  GW L
Sbjct: 1   MKLLFLVLLSSLVTFGWTL 19


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 308 LRLVTVILLSSFVMVGWCL 364
           ++L+ ++LLSS V  GW L
Sbjct: 1   MKLLFLVLLSSLVTFGWTL 19


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 653 RRNGRRNVH 627
           RRNGR NVH
Sbjct: 55  RRNGRHNVH 63


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/50 (24%), Positives = 18/50 (36%)
 Frame = -2

Query: 626 HQQWRRFRVSDGNANHQSASICYTGYARHLRAAHRSERPSRDQAHDVYCP 477
           H+++R  R  D      +  + +T    HL       R    QA    CP
Sbjct: 644 HKKFRALRQKDSAEAEPAVIVQHTQSQLHLHLTSPPARSPSSQAQASQCP 693


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -3

Query: 730 QNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQ 566
           Q + + D++L    L +     KLT    D G F I+   + GS++GTP+   P+
Sbjct: 716 QGLVHRDVKLKNV-LLDIENRAKLT----DFG-FCITEVMMLGSIVGTPVHMAPE 764


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -3

Query: 730 QNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQ 566
           Q + + D++L    L +     KLT    D G F I+   + GS++GTP+   P+
Sbjct: 754 QGLVHRDVKLKNV-LLDIENRAKLT----DFG-FCITEVMMLGSIVGTPVHMAPE 802


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 721 TYADIELTIAGLAEKARTGKLTIEEMDGG 635
           TY D    +   A +   G +TIE + GG
Sbjct: 613 TYEDPNQAVREFAREIDAGYITIEAIIGG 641


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,231
Number of Sequences: 438
Number of extensions: 3418
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)