Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11c02f
(542 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L37418-1|AAB59629.1| 453|Homo sapiens dihydrolipoamide succinyl... 32 1.1
D26535-1|BAA05536.1| 453|Homo sapiens dihydrolipoamide succinyl... 32 1.1
D16373-1|BAA03871.1| 453|Homo sapiens mitochondrial dihydrolipo... 32 1.1
CR456727-1|CAG33008.1| 453|Homo sapiens DLST protein. 32 1.1
BC001922-1|AAH01922.1| 453|Homo sapiens dihydrolipoamide S-succ... 32 1.1
BC000302-1|AAH00302.1| 453|Homo sapiens dihydrolipoamide S-succ... 32 1.1
AC006530-2|AAD30181.1| 453|Homo sapiens alpha-KG-E2 protein. 32 1.1
BC000121-1|AAH00121.1| 521|Homo sapiens C17orf53 protein protein. 31 2.0
D86407-2|BAA21825.1| 793|Homo sapiens ApoER2delta4-7 protein. 31 3.4
D86407-1|BAA21824.1| 963|Homo sapiens ApoER2 protein. 31 3.4
D50678-1|BAA09328.1| 963|Homo sapiens apolipoprotein E receptor... 31 3.4
BC051836-1|AAH51836.2| 904|Homo sapiens low density lipoprotein... 31 3.4
BC017395-1|AAH17395.1| 134|Homo sapiens LARP4 protein protein. 31 3.4
BC006443-1|AAH06443.1| 244|Homo sapiens Similar to low density ... 31 3.4
AL606760-4|CAI18908.1| 963|Homo sapiens low density lipoprotein... 31 3.4
AL606760-2|CAI18910.1| 904|Homo sapiens low density lipoprotein... 31 3.4
AL355483-3|CAI22781.1| 963|Homo sapiens low density lipoprotein... 31 3.4
AL355483-1|CAI22780.1| 904|Homo sapiens low density lipoprotein... 31 3.4
AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens ... 31 3.4
AK055521-1|BAB70940.1| 605|Homo sapiens protein ( Homo sapiens ... 31 3.4
AF044578-1|AAD02338.1| 579|Homo sapiens putative DNA polymerase... 30 6.0
>L37418-1|AAB59629.1| 453|Homo sapiens dihydrolipoamide
succinyltransferase protein.
Length = 453
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +1
Query: 418 RALVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVK 534
R +V +N V S+ F V +D V TP+F +SV+EGDV+
Sbjct: 46 RKVVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVR 88
>D26535-1|BAA05536.1| 453|Homo sapiens dihydrolipoamide
succinyltransferase protein.
Length = 453
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +1
Query: 418 RALVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVK 534
R +V +N V S+ F V +D V TP+F +SV+EGDV+
Sbjct: 46 RKVVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVR 88
>D16373-1|BAA03871.1| 453|Homo sapiens mitochondrial
dihydrolipoamide succinyltransferase protein.
Length = 453
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +1
Query: 418 RALVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVK 534
R +V +N V S+ F V +D V TP+F +SV+EGDV+
Sbjct: 46 RKVVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVR 88
>CR456727-1|CAG33008.1| 453|Homo sapiens DLST protein.
Length = 453
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +1
Query: 418 RALVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVK 534
R +V +N V S+ F V +D V TP+F +SV+EGDV+
Sbjct: 46 RKVVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVR 88
>BC001922-1|AAH01922.1| 453|Homo sapiens dihydrolipoamide
S-succinyltransferase (E2 component of 2-oxo-glutarate
complex protein.
Length = 453
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +1
Query: 418 RALVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVK 534
R +V +N V S+ F V +D V TP+F +SV+EGDV+
Sbjct: 46 RKVVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVR 88
>BC000302-1|AAH00302.1| 453|Homo sapiens dihydrolipoamide
S-succinyltransferase (E2 component of 2-oxo-glutarate
complex protein.
Length = 453
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +1
Query: 418 RALVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVK 534
R +V +N V S+ F V +D V TP+F +SV+EGDV+
Sbjct: 46 RKVVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVR 88
>AC006530-2|AAD30181.1| 453|Homo sapiens alpha-KG-E2 protein.
Length = 453
Score = 32.3 bits (70), Expect = 1.1
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = +1
Query: 418 RALVAHNQVASIHFTNPLLVEQD----VTTPSFPDSVSEGDVK 534
R +V +N V S+ F V +D V TP+F +SV+EGDV+
Sbjct: 46 RKVVINNSVFSVRFFRTTAVCKDDLVTVKTPAFAESVTEGDVR 88
>BC000121-1|AAH00121.1| 521|Homo sapiens C17orf53 protein protein.
Length = 521
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 288 NATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPL 458
++T ++ P + A+ P+ P+ ++S N +T TE RPQSS++HPL
Sbjct: 84 SSTPSADSRPSCIGAA-PLRPVSTSSSWIGNQRRVT--VTEVLREPARPQSSALHPL 137
>D86407-2|BAA21825.1| 793|Homo sapiens ApoER2delta4-7 protein.
Length = 793
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 282 SENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESS-GRPQSSSIHPL 458
S + TTL VPA+ V+ S QN T T + T SS P++ SI P
Sbjct: 570 STSTTTLASTMTRTVPATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAPSISPS 629
Query: 459 HESPACRARCDH 494
SPA H
Sbjct: 630 TLSPATSNHSQH 641
>D86407-1|BAA21824.1| 963|Homo sapiens ApoER2 protein.
Length = 963
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 282 SENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESS-GRPQSSSIHPL 458
S + TTL VPA+ V+ S QN T T + T SS P++ SI P
Sbjct: 740 STSTTTLASTMTRTVPATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAPSISPS 799
Query: 459 HESPACRARCDH 494
SPA H
Sbjct: 800 TLSPATSNHSQH 811
>D50678-1|BAA09328.1| 963|Homo sapiens apolipoprotein E receptor 2
precursor protein.
Length = 963
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 282 SENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESS-GRPQSSSIHPL 458
S + TTL VPA+ V+ S QN T T + T SS P++ SI P
Sbjct: 740 STSTTTLASTMTRTVPATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAPSISPS 799
Query: 459 HESPACRARCDH 494
SPA H
Sbjct: 800 TLSPATSNHSQH 811
>BC051836-1|AAH51836.2| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 282 SENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESS-GRPQSSSIHPL 458
S + TTL VPA+ V+ S QN T T + T SS P++ SI P
Sbjct: 740 STSTTTLASTMTRTVPATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAPSISPS 799
Query: 459 HESPACRARCDH 494
SPA H
Sbjct: 800 TLSPATSNHSQH 811
>BC017395-1|AAH17395.1| 134|Homo sapiens LARP4 protein protein.
Length = 134
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/65 (36%), Positives = 32/65 (49%)
Frame = +3
Query: 315 PDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPACRARCDH 494
P P+S V PL+ SN + T+N E +G P++S P HE P RA D+
Sbjct: 36 PPKEPSSVLVQPLRELRSNVVSP---TKN-----EDNGAPENSVEKP-HEKPEARASKDY 86
Query: 495 SKFPG 509
S F G
Sbjct: 87 SGFRG 91
>BC006443-1|AAH06443.1| 244|Homo sapiens Similar to low density
lipoprotein receptor-related protein 8, apolipoprotein e
protein.
Length = 244
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 282 SENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESS-GRPQSSSIHPL 458
S + TTL VPA+ V+ S QN T T + T SS P++ SI P
Sbjct: 21 STSTTTLASTMTRTVPATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAPSISPS 80
Query: 459 HESPACRARCDH 494
SPA H
Sbjct: 81 TLSPATSNHSQH 92
>AL606760-4|CAI18908.1| 963|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 963
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 282 SENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESS-GRPQSSSIHPL 458
S + TTL VPA+ V+ S QN T T + T SS P++ SI P
Sbjct: 740 STSTTTLASTMTRTVPATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAPSISPS 799
Query: 459 HESPACRARCDH 494
SPA H
Sbjct: 800 TLSPATSNHSQH 811
>AL606760-2|CAI18910.1| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 282 SENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESS-GRPQSSSIHPL 458
S + TTL VPA+ V+ S QN T T + T SS P++ SI P
Sbjct: 740 STSTTTLASTMTRTVPATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAPSISPS 799
Query: 459 HESPACRARCDH 494
SPA H
Sbjct: 800 TLSPATSNHSQH 811
>AL355483-3|CAI22781.1| 963|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 963
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 282 SENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESS-GRPQSSSIHPL 458
S + TTL VPA+ V+ S QN T T + T SS P++ SI P
Sbjct: 740 STSTTTLASTMTRTVPATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAPSISPS 799
Query: 459 HESPACRARCDH 494
SPA H
Sbjct: 800 TLSPATSNHSQH 811
>AL355483-1|CAI22780.1| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +3
Query: 282 SENATTLLEAHPDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESS-GRPQSSSIHPL 458
S + TTL VPA+ V+ S QN T T + T SS P++ SI P
Sbjct: 740 STSTTTLASTMTRTVPATTRAPGTTVHRSTYQNHSTETPSLTAAVPSSVSVPRAPSISPS 799
Query: 459 HESPACRARCDH 494
SPA H
Sbjct: 800 TLSPATSNHSQH 811
>AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens
cDNA FLJ43123 fis, clone CTONG3003972. ).
Length = 654
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/65 (36%), Positives = 32/65 (49%)
Frame = +3
Query: 315 PDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPACRARCDH 494
P P+S V PL+ SN + T+N E +G P++S P HE P RA D+
Sbjct: 556 PPKEPSSVLVQPLRELRSNVVSP---TKN-----EDNGAPENSVEKP-HEKPEARASKDY 606
Query: 495 SKFPG 509
S F G
Sbjct: 607 SGFRG 611
>AK055521-1|BAB70940.1| 605|Homo sapiens protein ( Homo sapiens
cDNA FLJ30959 fis, clone HCASM2000307. ).
Length = 605
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/65 (36%), Positives = 32/65 (49%)
Frame = +3
Query: 315 PDAVPASGPVHPLQVNNSNAQNTCTLTRNQTEPTESSGRPQSSSIHPLHESPACRARCDH 494
P P+S V PL+ SN + T+N E +G P++S P HE P RA D+
Sbjct: 507 PPKEPSSVLVQPLRELRSNVVSP---TKN-----EDNGAPENSVEKP-HEKPEARASKDY 557
Query: 495 SKFPG 509
S F G
Sbjct: 558 SGFRG 562
>AF044578-1|AAD02338.1| 579|Homo sapiens putative DNA polymerase
protein.
Length = 579
Score = 29.9 bits (64), Expect = 6.0
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 233 R*LVSSTFSLRVSTFNKRKCYDAARSTSRRCTGVRASPSASSQQLKRPKYLHP 391
R L++S LR F K K + ++ S TG++ PS S+ L + LHP
Sbjct: 108 RFLITSNNQLREILFGKLKLHLLSQRNSLPRTGLQKYPSTVSEALNALRDLHP 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,366,509
Number of Sequences: 237096
Number of extensions: 1681731
Number of successful extensions: 7747
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7742
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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